RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 NAP1L5Q96NT1 182 aaPredicted RBP13.17□□□□□ -0.3
TGFB1-204ENST00000600196 TTPALQ9BTX7 342 aa13.17□□□□□ -0.3
TGFB1-204ENST00000600196 GOLGA2P5Q9HBQ8 144 aa13.17□□□□□ -0.3
TGFB1-204ENST00000600196 FNIP2Q9P278 1114 aa13.17□□□□□ -0.3
TGFB1-204ENST00000600196 CNTN6Q9UQ52 1028 aa13.17□□□□□ -0.3
TGFB1-204ENST00000600196 SIK3Q9Y2K2 1263 aa13.17□□□□□ -0.3
TGFB1-204ENST00000600196 YBX2Q9Y2T7 364 aaKnown RBP13.17□□□□□ -0.3
TGFB1-204ENST00000600196 SNX9Q9Y5X1 595 aa13.17□□□□□ -0.3
TGFB1-204ENST00000600196 A0A1W2PQJ5 194 aa13.16□□□□□ -0.3
TGFB1-204ENST00000600196 LCHNA4D1U4 455 aa13.16□□□□□ -0.3
TGFB1-204ENST00000600196 PES1O00541 588 aaKnown RBP13.16□□□□□ -0.3
TGFB1-204ENST00000600196 CCDC172P0C7W6 258 aa13.16□□□□□ -0.3
TGFB1-204ENST00000600196 CTSAP10619 480 aa13.16□□□□□ -0.3
TGFB1-204ENST00000600196 PCSK1P29120 753 aa13.16□□□□□ -0.3
TGFB1-204ENST00000600196 CTNNB1P35222 781 aa13.16□□□□□ -0.3
TGFB1-204ENST00000600196 BPIFB4P59827 614 aa13.16□□□□□ -0.3
TGFB1-204ENST00000600196 INCA1Q0VD86 236 aa13.16□□□□□ -0.3
TGFB1-204ENST00000600196 CUL2Q13617 745 aa13.16□□□□□ -0.3
TGFB1-204ENST00000600196 MAPRE1Q15691 268 aaKnown RBP13.16□□□□□ -0.3
TGFB1-204ENST00000600196 PTPROQ16827 1216 aa13.16□□□□□ -0.3
TGFB1-204ENST00000600196 DPY19L2P1Q6NXN4 242 aa13.16□□□□□ -0.3
TGFB1-204ENST00000600196 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.16□□□□□ -0.3
TGFB1-204ENST00000600196 C3orf58Q8NDZ4 430 aa13.16□□□□□ -0.3
TGFB1-204ENST00000600196 FBXO22Q8NEZ5 403 aa13.16□□□□□ -0.3
TGFB1-204ENST00000600196 SPPL3Q8TCT6 385 aa13.16□□□□□ -0.3
TGFB1-204ENST00000600196 PIK3R5Q8WYR1 880 aa13.16□□□□□ -0.3
TGFB1-204ENST00000600196 ACBD6Q9BR61 282 aa13.16□□□□□ -0.3
TGFB1-204ENST00000600196 PAAF1Q9BRP4 392 aa13.16□□□□□ -0.3
TGFB1-204ENST00000600196 TRIM5Q9C035 493 aa13.16□□□□□ -0.3
TGFB1-204ENST00000600196 MMRN2Q9H8L6 949 aa13.16□□□□□ -0.3
TGFB1-204ENST00000600196 RXFP1Q9HBX9 757 aa13.16□□□□□ -0.3
TGFB1-204ENST00000600196 IFNKQ9P0W0 207 aa13.16□□□□□ -0.3
TGFB1-204ENST00000600196 HSFX1Q9UBD0 423 aa13.16□□□□□ -0.3
TGFB1-204ENST00000600196 PRG3Q9Y2Y8 225 aaPredicted RBP13.16□□□□□ -0.3
TGFB1-204ENST00000600196 SPTLC1O15269 473 aa13.15□□□□□ -0.3
TGFB1-204ENST00000600196 TBC1D4O60343 1298 aa13.15□□□□□ -0.3
TGFB1-204ENST00000600196 UCHL3P15374 230 aa13.15□□□□□ -0.3
TGFB1-204ENST00000600196 SLC9A1P19634 815 aa13.15□□□□□ -0.3
TGFB1-204ENST00000600196 CDC25BP30305 580 aa13.15□□□□□ -0.3
TGFB1-204ENST00000600196 ASPAP45381 313 aa13.15□□□□□ -0.3
TGFB1-204ENST00000600196 GLUD2P49448 558 aa13.15□□□□□ -0.3
TGFB1-204ENST00000600196 GUCY2FP51841 1108 aa13.15□□□□□ -0.3
TGFB1-204ENST00000600196 YWHAHQ04917 246 aaPredicted RBP13.15□□□□□ -0.3
TGFB1-204ENST00000600196 SYCP1Q15431 976 aa13.15□□□□□ -0.3
TGFB1-204ENST00000600196 SOWAHAQ2M3V2 549 aa13.15□□□□□ -0.3
TGFB1-204ENST00000600196 FAM171A1Q5VUB5 890 aa13.15□□□□□ -0.3
TGFB1-204ENST00000600196 KIAA0319Q5VV43 1072 aa13.15□□□□□ -0.3
TGFB1-204ENST00000600196 SPECC1LQ69YQ0 1117 aa13.15□□□□□ -0.3
TGFB1-204ENST00000600196 CRYBG2Q8N1P7 616 aa13.15□□□□□ -0.3
TGFB1-204ENST00000600196 NEK11Q8NG66 645 aa13.15□□□□□ -0.3
TGFB1-204ENST00000600196 C2orf15Q8WU43 125 aaKnown RBP13.15□□□□□ -0.3
TGFB1-204ENST00000600196 TNIP3Q96KP6 325 aa13.15□□□□□ -0.3
TGFB1-204ENST00000600196 NAA15Q9BXJ9 866 aaKnown RBP13.15□□□□□ -0.3
TGFB1-204ENST00000600196 STK33Q9BYT3 514 aa13.15□□□□□ -0.3
TGFB1-204ENST00000600196 GPR62Q9BZJ7 368 aa13.15□□□□□ -0.3
TGFB1-204ENST00000600196 XPO4Q9C0E2 1151 aaKnown RBP13.15□□□□□ -0.3
TGFB1-204ENST00000600196 NKX2-4Q9H2Z4 354 aa13.15□□□□□ -0.3
TGFB1-204ENST00000600196 MRPL17Q9NRX2 175 aaKnown RBP13.15□□□□□ -0.3
TGFB1-204ENST00000600196 CEP72Q9P209 647 aa13.15□□□□□ -0.3
TGFB1-204ENST00000600196 BARX2Q9UMQ3 279 aaPredicted RBP13.15□□□□□ -0.3
TGFB1-204ENST00000600196 PPEF2O14830 753 aa13.14□□□□□ -0.31
TGFB1-204ENST00000600196 FSCN2O14926 492 aa13.14□□□□□ -0.31
TGFB1-204ENST00000600196 TEX33O43247 280 aa13.14□□□□□ -0.31
TGFB1-204ENST00000600196 LPXNO60711 386 aa13.14□□□□□ -0.31
TGFB1-204ENST00000600196 LILRB3O75022 631 aa13.14□□□□□ -0.31
TGFB1-204ENST00000600196 ITGB1P05556 798 aa13.14□□□□□ -0.31
TGFB1-204ENST00000600196 URODP06132 367 aa13.14□□□□□ -0.31
TGFB1-204ENST00000600196 PAEPP09466 180 aa13.14□□□□□ -0.31
TGFB1-204ENST00000600196 GNL1P36915 607 aaPredicted RBP13.14□□□□□ -0.31
TGFB1-204ENST00000600196 PBX2P40425 430 aa13.14□□□□□ -0.31
TGFB1-204ENST00000600196 GPM6BQ13491 265 aa13.14□□□□□ -0.31
TGFB1-204ENST00000600196 GSE1Q14687 1217 aa13.14□□□□□ -0.31
TGFB1-204ENST00000600196 STILQ15468 1287 aa13.14□□□□□ -0.31
TGFB1-204ENST00000600196 MEA1Q16626 185 aa13.14□□□□□ -0.31
TGFB1-204ENST00000600196 OVOS1Q6IE37 1185 aa13.14□□□□□ -0.31
TGFB1-204ENST00000600196 SLC8B1Q6J4K2 584 aa13.14□□□□□ -0.31
TGFB1-204ENST00000600196 ZNF280DQ6N043 979 aa13.14□□□□□ -0.31
TGFB1-204ENST00000600196 KIAA1841Q6NSI8 718 aa13.14□□□□□ -0.31
TGFB1-204ENST00000600196 PHLDB3Q6NSJ2 640 aa13.14□□□□□ -0.31
TGFB1-204ENST00000600196 PPFIBP1Q86W92 1011 aa13.14□□□□□ -0.31
TGFB1-204ENST00000600196 VPS52Q8N1B4 723 aa13.14□□□□□ -0.31
TGFB1-204ENST00000600196 PPM1KQ8N3J5 372 aa13.14□□□□□ -0.31
TGFB1-204ENST00000600196 PDCL2Q8N4E4 241 aa13.14□□□□□ -0.31
TGFB1-204ENST00000600196 ZNF397Q8NF99 534 aaPredicted RBP13.14□□□□□ -0.31
TGFB1-204ENST00000600196 SYN2Q92777 582 aaPredicted RBP13.14□□□□□ -0.31
TGFB1-204ENST00000600196 PPP2R3CQ969Q6 453 aa13.14□□□□□ -0.31
TGFB1-204ENST00000600196 CEP295NLQ96MC4 621 aa13.14□□□□□ -0.31
TGFB1-204ENST00000600196 MMS19Q96T76 1030 aa13.14□□□□□ -0.31
TGFB1-204ENST00000600196 C17orf80Q9BSJ5 609 aa13.14□□□□□ -0.31
TGFB1-204ENST00000600196 CRACR2AQ9BSW2 395 aa13.14□□□□□ -0.31
TGFB1-204ENST00000600196 ZBP1Q9H171 429 aa13.14□□□□□ -0.31
TGFB1-204ENST00000600196 ZNF576Q9H609 170 aa13.14□□□□□ -0.31
TGFB1-204ENST00000600196 GRPEL1Q9HAV7 217 aa13.14□□□□□ -0.31
TGFB1-204ENST00000600196 APOBEC3GQ9HC16 384 aaKnown RBP13.14□□□□□ -0.31
TGFB1-204ENST00000600196 SIX2Q9NPC8 291 aa13.14□□□□□ -0.31
TGFB1-204ENST00000600196 UBE2TQ9NPD8 197 aaPredicted RBP13.14□□□□□ -0.31
TGFB1-204ENST00000600196 TLR9Q9NR96 1032 aa13.14□□□□□ -0.31
TGFB1-204ENST00000600196 NXF1Q9UBU9 619 aaKnown RBP13.14□□□□□ -0.31
TGFB1-204ENST00000600196 DPP7Q9UHL4 492 aa13.14□□□□□ -0.31
TGFB1-204ENST00000600196 CDH9Q9ULB4 789 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms