RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 CLCN4P51793 760 aa14.78□□□□□ -0.04
VRK3-219ENST00000600137 NCOA4Q13772 614 aa14.78□□□□□ -0.04
VRK3-219ENST00000600137 STX1AQ16623 288 aa14.78□□□□□ -0.04
VRK3-219ENST00000600137 WSCD1Q658N2 575 aa14.78□□□□□ -0.04
VRK3-219ENST00000600137 KRT39Q6A163 491 aa14.78□□□□□ -0.04
VRK3-219ENST00000600137 SLC8B1Q6J4K2 584 aa14.78□□□□□ -0.04
VRK3-219ENST00000600137 ANKS3Q6ZW76 656 aa14.78□□□□□ -0.04
VRK3-219ENST00000600137 OSTM1Q86WC4 334 aa14.78□□□□□ -0.04
VRK3-219ENST00000600137 APPL2Q8NEU8 664 aa14.78□□□□□ -0.04
VRK3-219ENST00000600137 KBTBD7Q8WVZ9 684 aa14.78□□□□□ -0.04
VRK3-219ENST00000600137 SYAP1Q96A49 352 aaPredicted RBP14.78□□□□□ -0.04
VRK3-219ENST00000600137 PABPC5Q96DU9 382 aaKnown RBP14.78□□□□□ -0.04
VRK3-219ENST00000600137 ZNF560Q96MR9 790 aa14.78□□□□□ -0.04
VRK3-219ENST00000600137 CDCA3Q99618 268 aaPredicted RBP14.78□□□□□ -0.04
VRK3-219ENST00000600137 DNAJC25Q9H1X3 360 aa14.78□□□□□ -0.04
VRK3-219ENST00000600137 HSD3B7Q9H2F3 369 aa14.78□□□□□ -0.04
VRK3-219ENST00000600137 IGFLR1Q9H665 355 aa14.78□□□□□ -0.04
VRK3-219ENST00000600137 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.78□□□□□ -0.04
VRK3-219ENST00000600137 SAMSN1Q9NSI8 373 aaKnown RBP14.78□□□□□ -0.04
VRK3-219ENST00000600137 DACH1Q9UI36 760 aa14.78□□□□□ -0.04
VRK3-219ENST00000600137 FBXL5Q9UKA1 691 aa14.78□□□□□ -0.04
VRK3-219ENST00000600137 HCFC2Q9Y5Z7 792 aa14.78□□□□□ -0.04
VRK3-219ENST00000600137 SYCE3A1L190 88 aa14.77□□□□□ -0.05
VRK3-219ENST00000600137 VNN2O95498 520 aa14.77□□□□□ -0.05
VRK3-219ENST00000600137 GNA14O95837 355 aa14.77□□□□□ -0.05
VRK3-219ENST00000600137 C1RP00736 705 aa14.77□□□□□ -0.05
VRK3-219ENST00000600137 EPCAMP16422 314 aa14.77□□□□□ -0.05
VRK3-219ENST00000600137 ATICP31939 592 aa14.77□□□□□ -0.05
VRK3-219ENST00000600137 OR1D2P34982 312 aa14.77□□□□□ -0.05
VRK3-219ENST00000600137 BIRC3Q13489 604 aa14.77□□□□□ -0.05
VRK3-219ENST00000600137 RAB33AQ14088 237 aa14.77□□□□□ -0.05
VRK3-219ENST00000600137 BMS1Q14692 1282 aaKnown RBP14.77□□□□□ -0.05
VRK3-219ENST00000600137 CCDC40Q4G0X9 1142 aa14.77□□□□□ -0.05
VRK3-219ENST00000600137 USP37Q86T82 979 aa14.77□□□□□ -0.05
VRK3-219ENST00000600137 PDCL2Q8N4E4 241 aa14.77□□□□□ -0.05
VRK3-219ENST00000600137 LMO3Q8TAP4 145 aa14.77□□□□□ -0.05
VRK3-219ENST00000600137 FEZF2Q8TBJ5 459 aa14.77□□□□□ -0.05
VRK3-219ENST00000600137 TMEM209Q96SK2 561 aa14.77□□□□□ -0.05
VRK3-219ENST00000600137 EMILIN2Q9BXX0 1053 aa14.77□□□□□ -0.05
VRK3-219ENST00000600137 THAP9Q9H5L6 903 aa14.77□□□□□ -0.05
VRK3-219ENST00000600137 APOBEC3GQ9HC16 384 aaKnown RBP14.77□□□□□ -0.05
VRK3-219ENST00000600137 SNX9Q9Y5X1 595 aa14.77□□□□□ -0.05
VRK3-219ENST00000600137 TGM5O43548 720 aa14.76□□□□□ -0.05
VRK3-219ENST00000600137 PHACTR2O75167 634 aa14.76□□□□□ -0.05
VRK3-219ENST00000600137 TBX10O75333 385 aa14.76□□□□□ -0.05
VRK3-219ENST00000600137 ABLIM3O94929 683 aa14.76□□□□□ -0.05
VRK3-219ENST00000600137 LETM1O95202 739 aaPredicted RBP14.76□□□□□ -0.05
VRK3-219ENST00000600137 PAPLNO95428 1278 aa14.76□□□□□ -0.05
VRK3-219ENST00000600137 FAM163BP0C2L3 166 aa14.76□□□□□ -0.05
VRK3-219ENST00000600137 ODC1P11926 461 aa14.76□□□□□ -0.05
VRK3-219ENST00000600137 KLRC2P26717 231 aa14.76□□□□□ -0.05
VRK3-219ENST00000600137 FMO5P49326 533 aa14.76□□□□□ -0.05
VRK3-219ENST00000600137 NDUFV1P49821 464 aa14.76□□□□□ -0.05
VRK3-219ENST00000600137 YWHAHQ04917 246 aaPredicted RBP14.76□□□□□ -0.05
VRK3-219ENST00000600137 KCNH2Q12809 1159 aa14.76□□□□□ -0.05
VRK3-219ENST00000600137 MYO1EQ12965 1108 aa14.76□□□□□ -0.05
VRK3-219ENST00000600137 TRPC3Q13507 836 aa14.76□□□□□ -0.05
VRK3-219ENST00000600137 SGSM1Q2NKQ1 1148 aa14.76□□□□□ -0.05
VRK3-219ENST00000600137 WDR72Q3MJ13 1102 aa14.76□□□□□ -0.05
VRK3-219ENST00000600137 ZSCAN23Q3MJ62 389 aa14.76□□□□□ -0.05
VRK3-219ENST00000600137 ANO6Q4KMQ2 910 aa14.76□□□□□ -0.05
VRK3-219ENST00000600137 CDKAL1Q5VV42 579 aa14.76□□□□□ -0.05
VRK3-219ENST00000600137 OVOS1Q6IE37 1185 aa14.76□□□□□ -0.05
VRK3-219ENST00000600137 SPOPLQ6IQ16 392 aa14.76□□□□□ -0.05
VRK3-219ENST00000600137 PDXDC1Q6P996 788 aa14.76□□□□□ -0.05
VRK3-219ENST00000600137 DPH6Q7L8W6 267 aa14.76□□□□□ -0.05
VRK3-219ENST00000600137 PALB2Q86YC2 1186 aa14.76□□□□□ -0.05
VRK3-219ENST00000600137 GLYCTKQ8IVS8 523 aa14.76□□□□□ -0.05
VRK3-219ENST00000600137 TOP6BLQ8N6T0 577 aa14.76□□□□□ -0.05
VRK3-219ENST00000600137 OR10T2Q8NGX3 314 aa14.76□□□□□ -0.05
VRK3-219ENST00000600137 MSLNLQ96KJ4 702 aa14.76□□□□□ -0.05
VRK3-219ENST00000600137 CNOT6LQ96LI5 555 aaKnown RBP14.76□□□□□ -0.05
VRK3-219ENST00000600137 PI4K2AQ9BTU6 479 aa14.76□□□□□ -0.05
VRK3-219ENST00000600137 SDCBP2Q9H190 292 aa14.76□□□□□ -0.05
VRK3-219ENST00000600137 POLIQ9UNA4 740 aa14.76□□□□□ -0.05
VRK3-219ENST00000600137 NFE2L3Q9Y4A8 694 aa14.76□□□□□ -0.05
VRK3-219ENST00000600137 CDY1Q9Y6F8 540 aa14.76□□□□□ -0.05
VRK3-219ENST00000600137 WDR27A2RRH5 827 aa14.75□□□□□ -0.05
VRK3-219ENST00000600137 H7C4K7 107 aa14.75□□□□□ -0.05
VRK3-219ENST00000600137 HCRTO43612 131 aa14.75□□□□□ -0.05
VRK3-219ENST00000600137 NCK2O43639 380 aa14.75□□□□□ -0.05
VRK3-219ENST00000600137 FGFR1OPO95684 399 aaKnown RBP14.75□□□□□ -0.05
VRK3-219ENST00000600137 ADH1AP07327 375 aa14.75□□□□□ -0.05
VRK3-219ENST00000600137 CA8P35219 290 aa14.75□□□□□ -0.05
VRK3-219ENST00000600137 MXI1P50539 228 aa14.75□□□□□ -0.05
VRK3-219ENST00000600137 ROR1Q01973 937 aa14.75□□□□□ -0.05
VRK3-219ENST00000600137 IQCB1Q15051 598 aa14.75□□□□□ -0.05
VRK3-219ENST00000600137 CTXN3Q4LDR2 81 aa14.75□□□□□ -0.05
VRK3-219ENST00000600137 DCAF17Q5H9S7 520 aaPredicted RBP14.75□□□□□ -0.05
VRK3-219ENST00000600137 TCERG1LQ5VWI1 586 aa14.75□□□□□ -0.05
VRK3-219ENST00000600137 SYCE2Q6PIF2 218 aa14.75□□□□□ -0.05
VRK3-219ENST00000600137 LRRTM3Q86VH5 581 aa14.75□□□□□ -0.05
VRK3-219ENST00000600137 TAF4BQ92750 862 aa14.75□□□□□ -0.05
VRK3-219ENST00000600137 PPP2R3CQ969Q6 453 aa14.75□□□□□ -0.05
VRK3-219ENST00000600137 PKMYT1Q99640 499 aa14.75□□□□□ -0.05
VRK3-219ENST00000600137 BPIFA3Q9BQP9 254 aa14.75□□□□□ -0.05
VRK3-219ENST00000600137 MRPL45Q9BRJ2 306 aaKnown RBP14.75□□□□□ -0.05
VRK3-219ENST00000600137 S1PR5Q9H228 398 aa14.75□□□□□ -0.05
VRK3-219ENST00000600137 UBE2ZQ9H832 354 aaPredicted RBP14.75□□□□□ -0.05
VRK3-219ENST00000600137 MMRN2Q9H8L6 949 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms