RNA–Protein interactions for RNA: ENST00000599848.5

UPF1-207, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 1 (best) BASIC

Gene UPF1, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-207ENST00000599848 IL10P22301 178 aa21.43■■□□□ 1.02
UPF1-207ENST00000599848 STAT4Q14765 748 aa21.43■■□□□ 1.02
UPF1-207ENST00000599848 FBXO32Q969P5 355 aa21.43■■□□□ 1.02
UPF1-207ENST00000599848 C1QTNF7Q9BXJ2 289 aa21.43■■□□□ 1.02
UPF1-207ENST00000599848 TMEM39BQ9GZU3 492 aa21.43■■□□□ 1.02
UPF1-207ENST00000599848 COPS7BQ9H9Q2 264 aaPredicted RBP21.43■■□□□ 1.02
UPF1-207ENST00000599848 ABI2Q9NYB9 513 aaPredicted RBP21.43■■□□□ 1.02
UPF1-207ENST00000599848 NRKQ7Z2Y5 1582 aa21.43■■□□□ 1.02
UPF1-207ENST00000599848 ZMYND10O75800 440 aa21.43■■□□□ 1.02
UPF1-207ENST00000599848 KRT8P05787 483 aa21.43■■□□□ 1.02
UPF1-207ENST00000599848 AKR1A1P14550 325 aa21.43■■□□□ 1.02
UPF1-207ENST00000599848 CTXN3Q4LDR2 81 aa21.43■■□□□ 1.02
UPF1-207ENST00000599848 REM2Q8IYK8 340 aaPredicted RBP21.43■■□□□ 1.02
UPF1-207ENST00000599848 KRCC1Q9NPI7 259 aaPredicted RBP21.43■■□□□ 1.02
UPF1-207ENST00000599848 C2orf81A6NN90 581 aa21.43■■□□□ 1.02
UPF1-207ENST00000599848 KRT78Q8N1N4 520 aa21.43■■□□□ 1.02
UPF1-207ENST00000599848 COG1Q8WTW3 980 aa21.43■■□□□ 1.02
UPF1-207ENST00000599848 PDGFRBP09619 1106 aa21.42■■□□□ 1.02
UPF1-207ENST00000599848 HIF1AQ16665 826 aa21.42■■□□□ 1.02
UPF1-207ENST00000599848 PDE11AQ9HCR9 933 aa21.42■■□□□ 1.02
UPF1-207ENST00000599848 ABHD10Q9NUJ1 306 aa21.42■■□□□ 1.02
UPF1-207ENST00000599848 SMARCAL1Q9NZC9 954 aa21.42■■□□□ 1.02
UPF1-207ENST00000599848 TPX2Q9ULW0 747 aaKnown RBP21.42■■□□□ 1.02
UPF1-207ENST00000599848 GPD1P21695 349 aa21.42■■□□□ 1.02
UPF1-207ENST00000599848 GEMP55040 296 aa21.42■■□□□ 1.02
UPF1-207ENST00000599848 ERAP2Q6P179 960 aa21.42■■□□□ 1.02
UPF1-207ENST00000599848 BBS7Q8IWZ6 715 aa21.42■■□□□ 1.02
UPF1-207ENST00000599848 DNERQ8NFT8 737 aa21.42■■□□□ 1.02
UPF1-207ENST00000599848 TNIP2Q8NFZ5 429 aa21.42■■□□□ 1.02
UPF1-207ENST00000599848 PLEKHA8Q96JA3 519 aa21.42■■□□□ 1.02
UPF1-207ENST00000599848 ANGPT2O15123 496 aa21.42■■□□□ 1.02
UPF1-207ENST00000599848 ZNF500O60304 480 aaPredicted RBP21.42■■□□□ 1.02
UPF1-207ENST00000599848 TRPA1O75762 1119 aa21.42■■□□□ 1.02
UPF1-207ENST00000599848 CSF1RP07333 972 aa21.42■■□□□ 1.02
UPF1-207ENST00000599848 TRIM49P0CI25 452 aa21.42■■□□□ 1.02
UPF1-207ENST00000599848 TRIM49CP0CI26 452 aa21.42■■□□□ 1.02
UPF1-207ENST00000599848 SRBD1Q8N5C6 995 aaKnown RBP21.42■■□□□ 1.02
UPF1-207ENST00000599848 PAWRQ96IZ0 340 aaKnown RBP21.42■■□□□ 1.02
UPF1-207ENST00000599848 GOLPH3LQ9H4A5 285 aa21.42■■□□□ 1.02
UPF1-207ENST00000599848 IQSEC2Q5JU85 1478 aa21.42■■□□□ 1.02
UPF1-207ENST00000599848 KCNN4O15554 427 aa21.42■■□□□ 1.02
UPF1-207ENST00000599848 GNRH1P01148 92 aa21.42■■□□□ 1.02
UPF1-207ENST00000599848 PPP3CCP48454 512 aa21.42■■□□□ 1.02
UPF1-207ENST00000599848 OCA2Q04671 838 aa21.42■■□□□ 1.02
UPF1-207ENST00000599848 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.42■■□□□ 1.02
UPF1-207ENST00000599848 RAP1GDS1P52306 607 aa21.42■■□□□ 1.02
UPF1-207ENST00000599848 BOLA3Q53S33 107 aa21.42■■□□□ 1.02
UPF1-207ENST00000599848 NUGGCQ68CJ6 796 aa21.42■■□□□ 1.02
UPF1-207ENST00000599848 RUBCNQ92622 972 aa21.42■■□□□ 1.02
UPF1-207ENST00000599848 GRAMD1AQ96CP6 724 aa21.42■■□□□ 1.02
UPF1-207ENST00000599848 SLC39A10Q9ULF5 831 aa21.42■■□□□ 1.02
UPF1-207ENST00000599848 FHOD1Q9Y613 1164 aa21.42■■□□□ 1.02
UPF1-207ENST00000599848 GSNP06396 782 aa21.41■■□□□ 1.02
UPF1-207ENST00000599848 ALOX15P16050 662 aaPredicted RBP21.41■■□□□ 1.02
UPF1-207ENST00000599848 KRT4P19013 534 aa21.41■■□□□ 1.02
UPF1-207ENST00000599848 SPRP35270 261 aaPredicted RBP21.41■■□□□ 1.02
UPF1-207ENST00000599848 CCDC144BQ3MJ40 725 aa21.41■■□□□ 1.02
UPF1-207ENST00000599848 TRIM65Q6PJ69 517 aa21.41■■□□□ 1.02
UPF1-207ENST00000599848 RNF168Q8IYW5 571 aaPredicted RBP21.41■■□□□ 1.02
UPF1-207ENST00000599848 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.41■■□□□ 1.023e-6■■■■■ 47.7
UPF1-207ENST00000599848 DACH2Q96NX9 599 aa21.41■■□□□ 1.02
UPF1-207ENST00000599848 LNPEPQ9UIQ6 1025 aa21.41■■□□□ 1.02
UPF1-207ENST00000599848 IZUMO3Q5VZ72 239 aa21.41■■□□□ 1.02
UPF1-207ENST00000599848 CES5AQ6NT32 575 aa21.41■■□□□ 1.02
UPF1-207ENST00000599848 TRIML2Q8N7C3 387 aa21.41■■□□□ 1.02
UPF1-207ENST00000599848 NKX2-3Q8TAU0 364 aa21.41■■□□□ 1.02
UPF1-207ENST00000599848 ACOT2P49753 483 aa21.41■■□□□ 1.02
UPF1-207ENST00000599848 HDAC4P56524 1084 aa21.41■■□□□ 1.02
UPF1-207ENST00000599848 MOXD1Q6UVY6 613 aa21.41■■□□□ 1.02
UPF1-207ENST00000599848 FAM83AQ86UY5 434 aa21.41■■□□□ 1.02
UPF1-207ENST00000599848 NLNQ9BYT8 704 aa21.41■■□□□ 1.02
UPF1-207ENST00000599848 FRMD8P1Q9BZ68 369 aaPredicted RBP21.41■■□□□ 1.02
UPF1-207ENST00000599848 ZNF556Q9HAH1 456 aa21.41■■□□□ 1.02
UPF1-207ENST00000599848 ALKQ9UM73 1620 aa21.41■■□□□ 1.02
UPF1-207ENST00000599848 RNF135Q8IUD6 432 aa21.41■■□□□ 1.02
UPF1-207ENST00000599848 ZBED8Q8IZ13 594 aa21.41■■□□□ 1.02
UPF1-207ENST00000599848 C17orf53Q8N3J3 647 aaPredicted RBP21.41■■□□□ 1.02
UPF1-207ENST00000599848 SCOCQ9UIL1 159 aa21.41■■□□□ 1.02
UPF1-207ENST00000599848 BMP10O95393 424 aa21.4■■□□□ 1.02
UPF1-207ENST00000599848 ERVK-10P10266 1014 aa21.4■■□□□ 1.02
UPF1-207ENST00000599848 SPDYAQ5MJ70 313 aa21.4■■□□□ 1.02
UPF1-207ENST00000599848 CENPPQ6IPU0 288 aa21.4■■□□□ 1.02
UPF1-207ENST00000599848 SARM1Q6SZW1 724 aa21.4■■□□□ 1.02
UPF1-207ENST00000599848 CD274Q9NZQ7 290 aa21.4■■□□□ 1.02
UPF1-207ENST00000599848 H2AFY2Q9P0M6 372 aaPredicted RBP21.4■■□□□ 1.02
UPF1-207ENST00000599848 A0A0G2JND7 137 aa21.4■■□□□ 1.02
UPF1-207ENST00000599848 B3GAT3O94766 335 aa21.4■■□□□ 1.02
UPF1-207ENST00000599848 NMT1P30419 496 aaKnown RBP21.4■■□□□ 1.02
UPF1-207ENST00000599848 PMS2P54278 862 aa21.4■■□□□ 1.02
UPF1-207ENST00000599848 TMEM62Q0P6H9 643 aa21.4■■□□□ 1.02
UPF1-207ENST00000599848 INPP5AQ14642 412 aa21.4■■□□□ 1.02
UPF1-207ENST00000599848 GRAMD1BQ3KR37 738 aa21.4■■□□□ 1.02
UPF1-207ENST00000599848 NBPF10Q6P3W6 841 aaKnown RBP21.4■■□□□ 1.02
UPF1-207ENST00000599848 UNC45BQ8IWX7 931 aa21.4■■□□□ 1.02
UPF1-207ENST00000599848 NBPF15Q8N660 670 aa21.4■■□□□ 1.02
UPF1-207ENST00000599848 C7orf25Q9BPX7 421 aa21.4■■□□□ 1.02
UPF1-207ENST00000599848 MPP6Q9NZW5 540 aa21.4■■□□□ 1.02
UPF1-207ENST00000599848 RNF103-CHMP3A0A140T963 221 aa21.4■■□□□ 1.02
UPF1-207ENST00000599848 OGTO15294 1046 aa21.4■■□□□ 1.02
UPF1-207ENST00000599848 TGFB3P10600 412 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms