RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 ZNF197O14709 1029 aa15.19■□□□□ 0.02
SHKBP1-218ENST00000598907 DCLK1O15075 740 aa15.19■□□□□ 0.02
SHKBP1-218ENST00000598907 SPATA31C1P0DKV0 1188 aa15.19■□□□□ 0.02
SHKBP1-218ENST00000598907 CSRP1P21291 193 aaKnown RBP15.19■□□□□ 0.02
SHKBP1-218ENST00000598907 TKTP29401 623 aaKnown RBP15.19■□□□□ 0.02
SHKBP1-218ENST00000598907 ELF1P32519 619 aa15.19■□□□□ 0.02
SHKBP1-218ENST00000598907 PSMC5P62195 406 aa15.19■□□□□ 0.02
SHKBP1-218ENST00000598907 ROR1Q01973 937 aa15.19■□□□□ 0.02
SHKBP1-218ENST00000598907 NFKBIBQ15653 356 aa15.19■□□□□ 0.02
SHKBP1-218ENST00000598907 ELF2Q15723 593 aa15.19■□□□□ 0.02
SHKBP1-218ENST00000598907 CYP4A22Q5TCH4 519 aa15.19■□□□□ 0.02
SHKBP1-218ENST00000598907 C1orf228Q6PIY5 440 aa15.19■□□□□ 0.02
SHKBP1-218ENST00000598907 PROSER1Q86XN7 944 aa15.19■□□□□ 0.02
SHKBP1-218ENST00000598907 MFSD6LQ8IWD5 586 aa15.19■□□□□ 0.02
SHKBP1-218ENST00000598907 ENGASEQ8NFI3 743 aa15.19■□□□□ 0.02
SHKBP1-218ENST00000598907 ZFYVE19Q96K21 471 aa15.19■□□□□ 0.02
SHKBP1-218ENST00000598907 BBC3Q96PG8 261 aaPredicted RBP15.19■□□□□ 0.02
SHKBP1-218ENST00000598907 MKNK1Q9BUB5 465 aa15.19■□□□□ 0.02
SHKBP1-218ENST00000598907 POLR3CQ9BUI4 534 aaPredicted RBP15.19■□□□□ 0.02
SHKBP1-218ENST00000598907 GOLPH3LQ9H4A5 285 aa15.19■□□□□ 0.02
SHKBP1-218ENST00000598907 C8orf33Q9H7E9 229 aaPredicted RBP15.19■□□□□ 0.02
SHKBP1-218ENST00000598907 CYP4F11Q9HBI6 524 aa15.19■□□□□ 0.02
SHKBP1-218ENST00000598907 POLR3BQ9NW08 1133 aaPredicted RBP15.19■□□□□ 0.02
SHKBP1-218ENST00000598907 SNTG2Q9NY99 539 aa15.19■□□□□ 0.02
SHKBP1-218ENST00000598907 SLC8A2Q9UPR5 921 aa15.19■□□□□ 0.02
SHKBP1-218ENST00000598907 MSRB2Q9Y3D2 182 aa15.19■□□□□ 0.02
SHKBP1-218ENST00000598907 ARID2Q68CP9 1835 aa15.18■□□□□ 0.02
SHKBP1-218ENST00000598907 A0A1B0GVL5 298 aa15.18■□□□□ 0.02
SHKBP1-218ENST00000598907 MED24O75448 989 aa15.18■□□□□ 0.02
SHKBP1-218ENST00000598907 SLITRK3O94933 977 aa15.18■□□□□ 0.02
SHKBP1-218ENST00000598907 PFKFB1P16118 471 aa15.18■□□□□ 0.02
SHKBP1-218ENST00000598907 PTMSP20962 102 aa15.18■□□□□ 0.02
SHKBP1-218ENST00000598907 MUTP22033 750 aa15.18■□□□□ 0.02
SHKBP1-218ENST00000598907 FGFR3P22607 806 aa15.18■□□□□ 0.02
SHKBP1-218ENST00000598907 IGFBP6P24592 240 aaPredicted RBP15.18■□□□□ 0.02
SHKBP1-218ENST00000598907 RPA1P27694 616 aa15.18■□□□□ 0.02
SHKBP1-218ENST00000598907 UBA7P41226 1012 aa15.18■□□□□ 0.02
SHKBP1-218ENST00000598907 MBTD1Q05BQ5 628 aa15.18■□□□□ 0.02
SHKBP1-218ENST00000598907 CCINQ13939 588 aa15.18■□□□□ 0.02
SHKBP1-218ENST00000598907 KRT79Q5XKE5 535 aa15.18■□□□□ 0.02
SHKBP1-218ENST00000598907 CATSPER3Q86XQ3 398 aa15.18■□□□□ 0.02
SHKBP1-218ENST00000598907 FSIP1Q8NA03 581 aa15.18■□□□□ 0.02
SHKBP1-218ENST00000598907 ERMNQ8TAM6 284 aa15.18■□□□□ 0.02
SHKBP1-218ENST00000598907 TCP11Q8WWU5 503 aa15.18■□□□□ 0.02
SHKBP1-218ENST00000598907 DDX27Q96GQ7 796 aaKnown RBP15.18■□□□□ 0.02
SHKBP1-218ENST00000598907 ZC3H10Q96K80 434 aaKnown RBP15.18■□□□□ 0.02
SHKBP1-218ENST00000598907 PNMA5Q96PV4 448 aa15.18■□□□□ 0.02
SHKBP1-218ENST00000598907 HHIPQ96QV1 700 aa15.18■□□□□ 0.02
SHKBP1-218ENST00000598907 EIF2AK1Q9BQI3 630 aaKnown RBP15.18■□□□□ 0.02
SHKBP1-218ENST00000598907 DUSP15Q9H1R2 295 aaPredicted RBP15.18■□□□□ 0.02
SHKBP1-218ENST00000598907 CXCL16Q9H2A7 254 aa15.18■□□□□ 0.02
SHKBP1-218ENST00000598907 DHX33Q9H6R0 707 aaKnown RBP15.18■□□□□ 0.02
SHKBP1-218ENST00000598907 TUFT1Q9NNX1 390 aa15.18■□□□□ 0.02
SHKBP1-218ENST00000598907 FAM13BQ9NYF5 915 aa15.18■□□□□ 0.02
SHKBP1-218ENST00000598907 GTSE1Q9NYZ3 720 aa15.18■□□□□ 0.02
SHKBP1-218ENST00000598907 ANKFY1Q9P2R3 1169 aa15.18■□□□□ 0.02
SHKBP1-218ENST00000598907 A0A087X0B3 334 aa15.17■□□□□ 0.02
SHKBP1-218ENST00000598907 SPAARA0A1B0GVQ0 90 aa15.17■□□□□ 0.02
SHKBP1-218ENST00000598907 ARHGEF37A1IGU5 675 aa15.17■□□□□ 0.02
SHKBP1-218ENST00000598907 MYBPHLA2RUH7 354 aa15.17■□□□□ 0.02
SHKBP1-218ENST00000598907 PATE3B3GLJ2 98 aa15.17■□□□□ 0.02
SHKBP1-218ENST00000598907 PTGESO14684 152 aa15.17■□□□□ 0.02
SHKBP1-218ENST00000598907 AKAP3O75969 853 aa15.17■□□□□ 0.02
SHKBP1-218ENST00000598907 P4HBP07237 508 aaKnown RBP15.17■□□□□ 0.02
SHKBP1-218ENST00000598907 LIG1P18858 919 aa15.17■□□□□ 0.02
SHKBP1-218ENST00000598907 GBP1P32455 592 aa15.17■□□□□ 0.02
SHKBP1-218ENST00000598907 RFC5P40937 340 aa15.17■□□□□ 0.02
SHKBP1-218ENST00000598907 NDUFA8P51970 172 aa15.17■□□□□ 0.02
SHKBP1-218ENST00000598907 PTENP60484 403 aa15.17■□□□□ 0.02
SHKBP1-218ENST00000598907 TEAD2Q15562 447 aa15.17■□□□□ 0.02
SHKBP1-218ENST00000598907 ECM1Q16610 540 aa15.17■□□□□ 0.02
SHKBP1-218ENST00000598907 AMHR2Q16671 573 aa15.17■□□□□ 0.02
SHKBP1-218ENST00000598907 TMEM119Q4V9L6 283 aa15.17■□□□□ 0.02
SHKBP1-218ENST00000598907 HAUS3Q68CZ6 603 aa15.17■□□□□ 0.02
SHKBP1-218ENST00000598907 SLC27A1Q6PCB7 646 aa15.17■□□□□ 0.02
SHKBP1-218ENST00000598907 RTL10Q7L3V2 364 aa15.17■□□□□ 0.02
SHKBP1-218ENST00000598907 RALGPS2Q86X27 583 aaPredicted RBP15.17■□□□□ 0.02
SHKBP1-218ENST00000598907 FMR1NBQ8N0W7 255 aaPredicted RBP15.17■□□□□ 0.02
SHKBP1-218ENST00000598907 KCTD17Q8N5Z5 321 aa15.17■□□□□ 0.02
SHKBP1-218ENST00000598907 GPT2Q8TD30 523 aa15.17■□□□□ 0.02
SHKBP1-218ENST00000598907 SNX29Q8TEQ0 813 aa15.17■□□□□ 0.02
SHKBP1-218ENST00000598907 DYDC2Q96IM9 177 aa15.17■□□□□ 0.02
SHKBP1-218ENST00000598907 INSL5Q9Y5Q6 135 aa15.17■□□□□ 0.02
SHKBP1-218ENST00000598907 LAMA5O15230 3695 aa15.17■□□□□ 0.02
SHKBP1-218ENST00000598907 KIF26AQ9ULI4 1882 aaPredicted RBP15.16■□□□□ 0.02
SHKBP1-218ENST00000598907 ZMYM2Q9UBW7 1377 aa15.16■□□□□ 0.02
SHKBP1-218ENST00000598907 BCLAF3A2AJT9 711 aaKnown RBP15.16■□□□□ 0.02
SHKBP1-218ENST00000598907 CHADO15335 359 aa15.16■□□□□ 0.02
SHKBP1-218ENST00000598907 MOSPD3O75425 235 aa15.16■□□□□ 0.02
SHKBP1-218ENST00000598907 LYPLA2O95372 231 aa15.16■□□□□ 0.02
SHKBP1-218ENST00000598907 SEC24AO95486 1093 aa15.16■□□□□ 0.02
SHKBP1-218ENST00000598907 TXLNAP40222 546 aa15.16■□□□□ 0.02
SHKBP1-218ENST00000598907 CCT6AP40227 531 aaKnown RBP15.16■□□□□ 0.02
SHKBP1-218ENST00000598907 MLLT6P55198 1093 aaPredicted RBP15.16■□□□□ 0.02
SHKBP1-218ENST00000598907 KARSQ15046 597 aaKnown RBP15.16■□□□□ 0.02
SHKBP1-218ENST00000598907 E2F4Q16254 413 aa15.16■□□□□ 0.02
SHKBP1-218ENST00000598907 IQCEQ6IPM2 695 aa15.16■□□□□ 0.02
SHKBP1-218ENST00000598907 ELMOD1Q8N336 334 aa15.16■□□□□ 0.02
SHKBP1-218ENST00000598907 RGL1Q9NZL6 768 aa15.16■□□□□ 0.02
SHKBP1-218ENST00000598907 WRAP73Q9P2S5 460 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms