RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 ZNF560Q96MR9 790 aa18.04■□□□□ 0.48
SSBP4-204ENST00000597724 HOOK1Q9UJC3 728 aaKnown RBP18.04■□□□□ 0.48
SSBP4-204ENST00000597724 DSEQ9UL01 958 aa18.04■□□□□ 0.48
SSBP4-204ENST00000597724 NR2E1Q9Y466 385 aa18.04■□□□□ 0.48
SSBP4-204ENST00000597724 CALUO43852 315 aaPredicted RBP18.03■□□□□ 0.48
SSBP4-204ENST00000597724 KINO60870 393 aaKnown RBP18.03■□□□□ 0.48
SSBP4-204ENST00000597724 PRPF40AO75400 957 aaKnown RBP18.03■□□□□ 0.48
SSBP4-204ENST00000597724 SMC2O95347 1197 aa18.03■□□□□ 0.48
SSBP4-204ENST00000597724 TNNC2P02585 160 aa18.03■□□□□ 0.48
SSBP4-204ENST00000597724 NR3C1P04150 777 aa18.03■□□□□ 0.48
SSBP4-204ENST00000597724 DLATP10515 647 aaKnown RBP18.03■□□□□ 0.48
SSBP4-204ENST00000597724 TNNI1P19237 187 aa18.03■□□□□ 0.48
SSBP4-204ENST00000597724 PPM1LQ5SGD2 360 aa18.03■□□□□ 0.48
SSBP4-204ENST00000597724 CCDC149Q6ZUS6 474 aa18.03■□□□□ 0.48
SSBP4-204ENST00000597724 RNF135Q8IUD6 432 aa18.03■□□□□ 0.48
SSBP4-204ENST00000597724 ERCC4Q92889 916 aaPredicted RBP18.03■□□□□ 0.48
SSBP4-204ENST00000597724 SMARCE1Q969G3 411 aa18.03■□□□□ 0.48
SSBP4-204ENST00000597724 CCDC127Q96BQ5 260 aa18.03■□□□□ 0.48
SSBP4-204ENST00000597724 FNBP1Q96RU3 617 aa18.03■□□□□ 0.48
SSBP4-204ENST00000597724 CGRRF1Q99675 332 aa18.03■□□□□ 0.48
SSBP4-204ENST00000597724 WDR6Q9NNW5 1121 aaKnown RBP18.03■□□□□ 0.48
SSBP4-204ENST00000597724 USTQ9Y2C2 406 aa18.03■□□□□ 0.48
SSBP4-204ENST00000597724 DENND4AQ7Z401 1863 aa18.03■□□□□ 0.48
SSBP4-204ENST00000597724 OR6C75A6NL08 312 aa18.02■□□□□ 0.48
SSBP4-204ENST00000597724 C2CD4DB7Z1M9 353 aa18.02■□□□□ 0.48
SSBP4-204ENST00000597724 KRT19P08727 400 aa18.02■□□□□ 0.48
SSBP4-204ENST00000597724 CPB1P15086 417 aa18.02■□□□□ 0.48
SSBP4-204ENST00000597724 SP100P23497 879 aaPredicted RBP18.02■□□□□ 0.48
SSBP4-204ENST00000597724 CASP4P49662 377 aa18.02■□□□□ 0.48
SSBP4-204ENST00000597724 GPR17Q13304 367 aa18.02■□□□□ 0.48
SSBP4-204ENST00000597724 NFIL3Q16649 462 aa18.02■□□□□ 0.48
SSBP4-204ENST00000597724 ZNF658Q5TYW1 1059 aaPredicted RBP18.02■□□□□ 0.48
SSBP4-204ENST00000597724 TRAPPC11Q7Z392 1133 aa18.02■□□□□ 0.48
SSBP4-204ENST00000597724 TCEAL8Q8IYN2 117 aa18.02■□□□□ 0.48
SSBP4-204ENST00000597724 SMYD4Q8IYR2 804 aaPredicted RBP18.02■□□□□ 0.48
SSBP4-204ENST00000597724 PLEKHO2Q8TD55 490 aa18.02■□□□□ 0.48
SSBP4-204ENST00000597724 PARD3BQ8TEW8 1205 aa18.02■□□□□ 0.48
SSBP4-204ENST00000597724 ZNF516Q92618 1163 aa18.02■□□□□ 0.48
SSBP4-204ENST00000597724 PIDD1Q9HB75 910 aa18.02■□□□□ 0.48
SSBP4-204ENST00000597724 TSHZ2Q9NRE2 1034 aa18.02■□□□□ 0.48
SSBP4-204ENST00000597724 GDAP2Q9NXN4 497 aa18.02■□□□□ 0.48
SSBP4-204ENST00000597724 AFF4Q9UHB7 1163 aaKnown RBP18.02■□□□□ 0.48
SSBP4-204ENST00000597724 MAFFQ9ULX9 164 aa18.02■□□□□ 0.48
SSBP4-204ENST00000597724 TSC2P49815 1807 aa18.02■□□□□ 0.47
SSBP4-204ENST00000597724 CCL16O15467 120 aa18.01■□□□□ 0.47
SSBP4-204ENST00000597724 SEC24AO95486 1093 aa18.01■□□□□ 0.47
SSBP4-204ENST00000597724 POU2F2P09086 479 aa18.01■□□□□ 0.47
SSBP4-204ENST00000597724 OR4Q2P0C623 313 aa18.01■□□□□ 0.47
SSBP4-204ENST00000597724 ELF1P32519 619 aa18.01■□□□□ 0.47
SSBP4-204ENST00000597724 UBE2HP62256 183 aa18.01■□□□□ 0.47
SSBP4-204ENST00000597724 BFSP1Q12934 665 aa18.01■□□□□ 0.47
SSBP4-204ENST00000597724 ZCWPW2Q504Y3 356 aa18.01■□□□□ 0.47
SSBP4-204ENST00000597724 COBLL1Q53SF7 1204 aa18.01■□□□□ 0.47
SSBP4-204ENST00000597724 WSCD1Q658N2 575 aa18.01■□□□□ 0.47
SSBP4-204ENST00000597724 RNF19BQ6ZMZ0 732 aa18.01■□□□□ 0.47
SSBP4-204ENST00000597724 METTL23Q86XA0 190 aa18.01■□□□□ 0.47
SSBP4-204ENST00000597724 RTP3Q9BQQ7 232 aa18.01■□□□□ 0.47
SSBP4-204ENST00000597724 R3HCC1Q9Y3T6 440 aaKnown RBP18.01■□□□□ 0.47
SSBP4-204ENST00000597724 CLUHO75153 1309 aa18■□□□□ 0.47
SSBP4-204ENST00000597724 PI4K2BG5E9Z4 385 aa18■□□□□ 0.47
SSBP4-204ENST00000597724 PRRG1O14668 218 aa18■□□□□ 0.47
SSBP4-204ENST00000597724 HUS1O60921 280 aa18■□□□□ 0.47
SSBP4-204ENST00000597724 XYLBO75191 536 aa18■□□□□ 0.47
SSBP4-204ENST00000597724 CST3P01034 146 aaPredicted RBP18■□□□□ 0.47
SSBP4-204ENST00000597724 NR2F2P24468 414 aa18■□□□□ 0.47
SSBP4-204ENST00000597724 PRCPP42785 496 aa18■□□□□ 0.47
SSBP4-204ENST00000597724 CLDN10P78369 228 aa18■□□□□ 0.47
SSBP4-204ENST00000597724 ADCY1Q08828 1119 aa18■□□□□ 0.47
SSBP4-204ENST00000597724 MYO1EQ12965 1108 aa18■□□□□ 0.47
SSBP4-204ENST00000597724 CLEC17AQ6ZS10 378 aa18■□□□□ 0.47
SSBP4-204ENST00000597724 OTOP3Q7RTS5 596 aa18■□□□□ 0.47
SSBP4-204ENST00000597724 GRASPQ7Z6J2 395 aaPredicted RBP18■□□□□ 0.47
SSBP4-204ENST00000597724 THEM5Q8N1Q8 247 aa18■□□□□ 0.47
SSBP4-204ENST00000597724 HPDLQ96IR7 371 aa18■□□□□ 0.47
SSBP4-204ENST00000597724 GTPBP4Q9BZE4 634 aaKnown RBP18■□□□□ 0.47
SSBP4-204ENST00000597724 EPHX3Q9H6B9 360 aa18■□□□□ 0.47
SSBP4-204ENST00000597724 CYP4F11Q9HBI6 524 aa18■□□□□ 0.47
SSBP4-204ENST00000597724 L1RE1Q9UN81 338 aa18■□□□□ 0.47
SSBP4-204ENST00000597724 FRMD4BQ9Y2L6 1034 aa18■□□□□ 0.47
SSBP4-204ENST00000597724 DOCK6Q96HP0 2047 aa17.99■□□□□ 0.47
SSBP4-204ENST00000597724 LRRIQ3A6PVS8 624 aaPredicted RBP17.99■□□□□ 0.47
SSBP4-204ENST00000597724 MAPK13O15264 365 aa17.99■□□□□ 0.47
SSBP4-204ENST00000597724 N4BP1O75113 896 aaKnown RBP17.99■□□□□ 0.47
SSBP4-204ENST00000597724 VNN2O95498 520 aa17.99■□□□□ 0.47
SSBP4-204ENST00000597724 AP3M2P53677 418 aa17.99■□□□□ 0.47
SSBP4-204ENST00000597724 EDRF1Q3B7T1 1238 aa17.99■□□□□ 0.47
SSBP4-204ENST00000597724 CEP135Q66GS9 1140 aa17.99■□□□□ 0.47
SSBP4-204ENST00000597724 ZDHHC14Q8IZN3 488 aa17.99■□□□□ 0.47
SSBP4-204ENST00000597724 PLCD3Q8N3E9 789 aa17.99■□□□□ 0.47
SSBP4-204ENST00000597724 PDCL2Q8N4E4 241 aa17.99■□□□□ 0.47
SSBP4-204ENST00000597724 TDRD5Q8NAT2 981 aaKnown RBP17.99■□□□□ 0.47
SSBP4-204ENST00000597724 OR10T2Q8NGX3 314 aa17.99■□□□□ 0.47
SSBP4-204ENST00000597724 TMC2Q8TDI7 906 aa17.99■□□□□ 0.47
SSBP4-204ENST00000597724 ACSF2Q96CM8 615 aaPredicted RBP17.99■□□□□ 0.47
SSBP4-204ENST00000597724 TMEM209Q96SK2 561 aa17.99■□□□□ 0.47
SSBP4-204ENST00000597724 MUTYHQ9UIF7 546 aa17.99■□□□□ 0.47
SSBP4-204ENST00000597724 POLIQ9UNA4 740 aa17.99■□□□□ 0.47
SSBP4-204ENST00000597724 INSL5Q9Y5Q6 135 aa17.99■□□□□ 0.47
SSBP4-204ENST00000597724 SNX9Q9Y5X1 595 aa17.99■□□□□ 0.47
SSBP4-204ENST00000597724 DCXO43602 365 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms