RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 DCAF4L1Q3SXM0 396 aa16.97■□□□□ 0.31
LIG1-214ENST00000597146 ZNF280DQ6N043 979 aa16.97■□□□□ 0.31
LIG1-214ENST00000597146 CEP120Q8N960 986 aa16.97■□□□□ 0.31
LIG1-214ENST00000597146 HSD17B14Q9BPX1 270 aa16.97■□□□□ 0.31
LIG1-214ENST00000597146 CRISPLD1Q9H336 500 aa16.97■□□□□ 0.31
LIG1-214ENST00000597146 INVSQ9Y283 1065 aa16.97■□□□□ 0.31
LIG1-214ENST00000597146 MSRB2Q9Y3D2 182 aa16.97■□□□□ 0.31
LIG1-214ENST00000597146 PTPRDP23468 1912 aa16.97■□□□□ 0.31
LIG1-214ENST00000597146 PI4KAP42356 2102 aa16.97■□□□□ 0.31
LIG1-214ENST00000597146 OBSL1O75147 1896 aa16.97■□□□□ 0.31
LIG1-214ENST00000597146 CCDC194A0A1B0GVG4 234 aa16.96■□□□□ 0.31
LIG1-214ENST00000597146 DEXIO95424 95 aa16.96■□□□□ 0.31
LIG1-214ENST00000597146 EGFP01133 1207 aa16.96■□□□□ 0.31
LIG1-214ENST00000597146 OR4Q2P0C623 313 aa16.96■□□□□ 0.31
LIG1-214ENST00000597146 XBP1P17861 261 aa16.96■□□□□ 0.31
LIG1-214ENST00000597146 GBP1P32455 592 aa16.96■□□□□ 0.31
LIG1-214ENST00000597146 MAPK6Q16659 721 aa16.96■□□□□ 0.31
LIG1-214ENST00000597146 ITPRIPL2Q3MIP1 535 aa16.96■□□□□ 0.31
LIG1-214ENST00000597146 TMEM196Q5HYL7 178 aa16.96■□□□□ 0.31
LIG1-214ENST00000597146 PDZD3Q86UT5 571 aa16.96■□□□□ 0.31
LIG1-214ENST00000597146 CAMKK1Q8N5S9 505 aa16.96■□□□□ 0.31
LIG1-214ENST00000597146 PGLYRP2Q96PD5 576 aa16.96■□□□□ 0.31
LIG1-214ENST00000597146 KIFC3Q9BVG8 833 aa16.96■□□□□ 0.31
LIG1-214ENST00000597146 C2orf40Q9H1Z8 148 aa16.96■□□□□ 0.31
LIG1-214ENST00000597146 GPSM3Q9Y4H4 160 aa16.96■□□□□ 0.31
LIG1-214ENST00000597146 ANK1P16157 1881 aa16.95■□□□□ 0.3
LIG1-214ENST00000597146 SPAARA0A1B0GVQ0 90 aa16.95■□□□□ 0.3
LIG1-214ENST00000597146 ACKR2O00590 384 aa16.95■□□□□ 0.3
LIG1-214ENST00000597146 KHNYNO15037 678 aaKnown RBP16.95■□□□□ 0.3
LIG1-214ENST00000597146 ATG13O75143 517 aa16.95■□□□□ 0.3
LIG1-214ENST00000597146 NEK4P51957 841 aa16.95■□□□□ 0.3
LIG1-214ENST00000597146 GRSF1Q12849 480 aaKnown RBP eCLIP16.95■□□□□ 0.3
LIG1-214ENST00000597146 KARSQ15046 597 aaKnown RBP16.95■□□□□ 0.3
LIG1-214ENST00000597146 GPR158Q5T848 1215 aa16.95■□□□□ 0.3
LIG1-214ENST00000597146 GAREM2Q75VX8 874 aa16.95■□□□□ 0.3
LIG1-214ENST00000597146 BPIFB1Q8TDL5 484 aa16.95■□□□□ 0.3
LIG1-214ENST00000597146 ZMAT2Q96NC0 199 aaKnown RBP16.95■□□□□ 0.3
LIG1-214ENST00000597146 SMG9Q9H0W8 520 aaKnown RBP16.95■□□□□ 0.3
LIG1-214ENST00000597146 NUB1Q9Y5A7 615 aa16.95■□□□□ 0.3
LIG1-214ENST00000597146 TSC2P49815 1807 aa16.95■□□□□ 0.3
LIG1-214ENST00000597146 FAM205CA6NFA0 338 aa16.94■□□□□ 0.3
LIG1-214ENST00000597146 OTOL1A6NHN0 477 aaPredicted RBP16.94■□□□□ 0.3
LIG1-214ENST00000597146 U2AF2P26368 475 aaKnown RBP eCLIP16.94■□□□□ 0.3
LIG1-214ENST00000597146 OSTNP61366 133 aa16.94■□□□□ 0.3
LIG1-214ENST00000597146 IRX4P78413 519 aa16.94■□□□□ 0.3
LIG1-214ENST00000597146 PLCB2Q00722 1185 aa16.94■□□□□ 0.3
LIG1-214ENST00000597146 EARS2Q5JPH6 523 aaKnown RBP16.94■□□□□ 0.3
LIG1-214ENST00000597146 NT5DC1Q5TFE4 455 aa16.94■□□□□ 0.3
LIG1-214ENST00000597146 PMS2CLQ68D20 193 aa16.94■□□□□ 0.3
LIG1-214ENST00000597146 NAIF1Q69YI7 327 aaPredicted RBP16.94■□□□□ 0.3
LIG1-214ENST00000597146 GALNT17Q6IS24 598 aa16.94■□□□□ 0.3
LIG1-214ENST00000597146 PIK3AP1Q6ZUJ8 805 aa16.94■□□□□ 0.3
LIG1-214ENST00000597146 PROSER1Q86XN7 944 aa16.94■□□□□ 0.3
LIG1-214ENST00000597146 DDX12PQ92771 950 aa16.94■□□□□ 0.3
LIG1-214ENST00000597146 C18orf25Q96B23 403 aaPredicted RBP16.94■□□□□ 0.3
LIG1-214ENST00000597146 ATXN3LQ9H3M9 355 aa16.94■□□□□ 0.3
LIG1-214ENST00000597146 OBP2AQ9NY56 170 aa16.94■□□□□ 0.3
LIG1-214ENST00000597146 ACACAQ13085 2346 aa16.93■□□□□ 0.3
LIG1-214ENST00000597146 MCM4P33991 863 aa16.93■□□□□ 0.3
LIG1-214ENST00000597146 MCM2P49736 904 aa16.93■□□□□ 0.3
LIG1-214ENST00000597146 CYP4F8P98187 520 aa16.93■□□□□ 0.3
LIG1-214ENST00000597146 COL28A1Q2UY09 1125 aa16.93■□□□□ 0.3
LIG1-214ENST00000597146 ATF7IP2Q5U623 682 aa16.93■□□□□ 0.3
LIG1-214ENST00000597146 TRIM68Q6AZZ1 485 aa16.93■□□□□ 0.3
LIG1-214ENST00000597146 CYP2U1Q7Z449 544 aa16.93■□□□□ 0.3
LIG1-214ENST00000597146 SLFN12Q8IYM2 578 aa16.93■□□□□ 0.3
LIG1-214ENST00000597146 TMEM130Q8N3G9 435 aa16.93■□□□□ 0.3
LIG1-214ENST00000597146 BEST2Q8NFU1 509 aa16.93■□□□□ 0.3
LIG1-214ENST00000597146 DEPTORQ8TB45 409 aa16.93■□□□□ 0.3
LIG1-214ENST00000597146 OXER1Q8TDS5 423 aa16.93■□□□□ 0.3
LIG1-214ENST00000597146 SUSD3Q96L08 255 aa16.93■□□□□ 0.3
LIG1-214ENST00000597146 BBC3Q96PG8 261 aaPredicted RBP16.93■□□□□ 0.3
LIG1-214ENST00000597146 POLR3CQ9BUI4 534 aaPredicted RBP16.93■□□□□ 0.3
LIG1-214ENST00000597146 FBRSL1Q9HCM7 1045 aaKnown RBP16.93■□□□□ 0.3
LIG1-214ENST00000597146 HPS4Q9NQG7 708 aa16.93■□□□□ 0.3
LIG1-214ENST00000597146 MAFFQ9ULX9 164 aa16.93■□□□□ 0.3
LIG1-214ENST00000597146 APC2O95996 2303 aa16.93■□□□□ 0.3
LIG1-214ENST00000597146 TRDMT1O14717 391 aaKnown RBP16.92■□□□□ 0.3
LIG1-214ENST00000597146 SOAT2O75908 522 aa16.92■□□□□ 0.3
LIG1-214ENST00000597146 APBB3O95704 486 aa16.92■□□□□ 0.3
LIG1-214ENST00000597146 CAPNS1P04632 268 aa16.92■□□□□ 0.3
LIG1-214ENST00000597146 ATP2B1P20020 1258 aa16.92■□□□□ 0.3
LIG1-214ENST00000597146 BCKDHBP21953 392 aa16.92■□□□□ 0.3
LIG1-214ENST00000597146 GABRR2P28476 465 aa16.92■□□□□ 0.3
LIG1-214ENST00000597146 EPHB3P54753 998 aa16.92■□□□□ 0.3
LIG1-214ENST00000597146 DUSP4Q13115 394 aa16.92■□□□□ 0.3
LIG1-214ENST00000597146 PLD1Q13393 1074 aa16.92■□□□□ 0.3
LIG1-214ENST00000597146 XKR4Q5GH76 650 aa16.92■□□□□ 0.3
LIG1-214ENST00000597146 TTC9BQ8N6N2 239 aa16.92■□□□□ 0.3
LIG1-214ENST00000597146 MCPH1Q8NEM0 835 aa16.92■□□□□ 0.3
LIG1-214ENST00000597146 RPLP0P6Q8NHW5 317 aa16.92■□□□□ 0.3
LIG1-214ENST00000597146 WASF1Q92558 559 aa16.92■□□□□ 0.3
LIG1-214ENST00000597146 TBC1D32Q96NH3 1257 aa16.92■□□□□ 0.3
LIG1-214ENST00000597146 TPSD1Q9BZJ3 242 aa16.92■□□□□ 0.3
LIG1-214ENST00000597146 EBF3Q9H4W6 596 aa16.92■□□□□ 0.3
LIG1-214ENST00000597146 SLC38A7Q9NVC3 462 aa16.92■□□□□ 0.3
LIG1-214ENST00000597146 TPCN1Q9ULQ1 816 aa16.92■□□□□ 0.3
LIG1-214ENST00000597146 GON4LQ3T8J9 2241 aa16.92■□□□□ 0.3
LIG1-214ENST00000597146 MEFVO15553 781 aaPredicted RBP16.91■□□□□ 0.3
LIG1-214ENST00000597146 PFKFB2O60825 505 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms