RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 IER2Q9BTL4 223 aa11.48□□□□□ -0.57
CHMP2A-202ENST00000596708 SLC27A5Q9Y2P5 690 aa11.48□□□□□ -0.57
CHMP2A-202ENST00000596708 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.48□□□□□ -0.57
CHMP2A-202ENST00000596708 ZNF292O60281 2723 aa11.47□□□□□ -0.57
CHMP2A-202ENST00000596708 GREB1Q4ZG55 1949 aa11.47□□□□□ -0.57
CHMP2A-202ENST00000596708 K7ENM7 598 aa11.47□□□□□ -0.57
CHMP2A-202ENST00000596708 HNRNPDLO14979 420 aaKnown RBP11.47□□□□□ -0.57
CHMP2A-202ENST00000596708 OGTO15294 1046 aa11.47□□□□□ -0.57
CHMP2A-202ENST00000596708 FAM13AO94988 1023 aa11.47□□□□□ -0.57
CHMP2A-202ENST00000596708 KRT18P05783 430 aaKnown RBP11.47□□□□□ -0.57
CHMP2A-202ENST00000596708 CXCL12P48061 93 aa11.47□□□□□ -0.57
CHMP2A-202ENST00000596708 GPR17Q13304 367 aa11.47□□□□□ -0.57
CHMP2A-202ENST00000596708 ZBTB6Q15916 424 aa11.47□□□□□ -0.57
CHMP2A-202ENST00000596708 LPAL2Q16609 132 aa11.47□□□□□ -0.57
CHMP2A-202ENST00000596708 ARSHQ5FYA8 562 aa11.47□□□□□ -0.57
CHMP2A-202ENST00000596708 ARMCX5Q6P1M9 558 aa11.47□□□□□ -0.57
CHMP2A-202ENST00000596708 PRR23BQ6ZRT6 265 aa11.47□□□□□ -0.57
CHMP2A-202ENST00000596708 GPBP1Q86WP2 473 aa11.47□□□□□ -0.57
CHMP2A-202ENST00000596708 ZNF687Q8N1G0 1237 aa11.47□□□□□ -0.57
CHMP2A-202ENST00000596708 BEST2Q8NFU1 509 aa11.47□□□□□ -0.57
CHMP2A-202ENST00000596708 CALML4Q96GE6 196 aa11.47□□□□□ -0.57
CHMP2A-202ENST00000596708 CRISPLD1Q9H336 500 aa11.47□□□□□ -0.57
CHMP2A-202ENST00000596708 ATXN3LQ9H3M9 355 aa11.47□□□□□ -0.57
CHMP2A-202ENST00000596708 ZHX3Q9H4I2 956 aa11.47□□□□□ -0.57
CHMP2A-202ENST00000596708 TRPV4Q9HBA0 871 aa11.47□□□□□ -0.57
CHMP2A-202ENST00000596708 ODF2LQ9ULJ1 636 aa11.47□□□□□ -0.57
CHMP2A-202ENST00000596708 SPTBN2O15020 2390 aa11.46□□□□□ -0.57
CHMP2A-202ENST00000596708 NCANO14594 1321 aa11.46□□□□□ -0.57
CHMP2A-202ENST00000596708 MTMR11A4FU01 709 aa11.46□□□□□ -0.57
CHMP2A-202ENST00000596708 SLC38A8A6NNN8 435 aa11.46□□□□□ -0.57
CHMP2A-202ENST00000596708 PRR5-ARHGAP8B1AHC4 643 aa11.46□□□□□ -0.57
CHMP2A-202ENST00000596708 PPEF2O14830 753 aa11.46□□□□□ -0.57
CHMP2A-202ENST00000596708 CHADO15335 359 aa11.46□□□□□ -0.57
CHMP2A-202ENST00000596708 VNN2O95498 520 aa11.46□□□□□ -0.57
CHMP2A-202ENST00000596708 CHRNB1P11230 501 aa11.46□□□□□ -0.57
CHMP2A-202ENST00000596708 ODC1P11926 461 aa11.46□□□□□ -0.57
CHMP2A-202ENST00000596708 TYMPP19971 482 aa11.46□□□□□ -0.57
CHMP2A-202ENST00000596708 GJB2P29033 226 aa11.46□□□□□ -0.57
CHMP2A-202ENST00000596708 UBA7P41226 1012 aa11.46□□□□□ -0.57
CHMP2A-202ENST00000596708 AARSP49588 968 aaKnown RBP eCLIP11.46□□□□□ -0.57
CHMP2A-202ENST00000596708 ATXN1P54253 815 aaKnown RBP11.46□□□□□ -0.57
CHMP2A-202ENST00000596708 ARHGAP8P85298 464 aa11.46□□□□□ -0.57
CHMP2A-202ENST00000596708 MYBPC2Q14324 1141 aa11.46□□□□□ -0.57
CHMP2A-202ENST00000596708 ENOX2Q16206 610 aaKnown RBP11.46□□□□□ -0.57
CHMP2A-202ENST00000596708 TMEM119Q4V9L6 283 aa11.46□□□□□ -0.57
CHMP2A-202ENST00000596708 ARHGAP15Q53QZ3 475 aa11.46□□□□□ -0.57
CHMP2A-202ENST00000596708 ARL6IP4Q66PJ3 421 aaKnown RBP11.46□□□□□ -0.57
CHMP2A-202ENST00000596708 JADE1Q6IE81 842 aa11.46□□□□□ -0.57
CHMP2A-202ENST00000596708 CENPPQ6IPU0 288 aa11.46□□□□□ -0.57
CHMP2A-202ENST00000596708 MAMSTRQ6ZN01 415 aa11.46□□□□□ -0.57
CHMP2A-202ENST00000596708 DNAJB7Q7Z6W7 309 aaPredicted RBP11.46□□□□□ -0.57
CHMP2A-202ENST00000596708 TMC8Q8IU68 726 aa11.46□□□□□ -0.57
CHMP2A-202ENST00000596708 ARID3BQ8IVW6 561 aaPredicted RBP11.46□□□□□ -0.57
CHMP2A-202ENST00000596708 CD302Q8IX05 232 aa11.46□□□□□ -0.57
CHMP2A-202ENST00000596708 CELF5Q8N6W0 485 aaKnown RBP11.46□□□□□ -0.57
CHMP2A-202ENST00000596708 ATAD1Q8NBU5 361 aa11.46□□□□□ -0.57
CHMP2A-202ENST00000596708 RASSF8Q8NHQ8 419 aa11.46□□□□□ -0.57
CHMP2A-202ENST00000596708 TTC8Q8TAM2 541 aa11.46□□□□□ -0.57
CHMP2A-202ENST00000596708 FAM200AQ8TCP9 573 aa11.46□□□□□ -0.57
CHMP2A-202ENST00000596708 SENP8Q96LD8 212 aa11.46□□□□□ -0.57
CHMP2A-202ENST00000596708 TSPAN18Q96SJ8 248 aa11.46□□□□□ -0.57
CHMP2A-202ENST00000596708 TMEM209Q96SK2 561 aa11.46□□□□□ -0.57
CHMP2A-202ENST00000596708 REEP2Q9BRK0 252 aa11.46□□□□□ -0.57
CHMP2A-202ENST00000596708 MSTO1Q9BUK6 570 aa11.46□□□□□ -0.57
CHMP2A-202ENST00000596708 LRRC3Q9BY71 257 aa11.46□□□□□ -0.57
CHMP2A-202ENST00000596708 DNAJC25Q9H1X3 360 aa11.46□□□□□ -0.57
CHMP2A-202ENST00000596708 C8orf33Q9H7E9 229 aaPredicted RBP11.46□□□□□ -0.57
CHMP2A-202ENST00000596708 CDV3Q9UKY7 258 aaKnown RBP11.46□□□□□ -0.57
CHMP2A-202ENST00000596708 TBX20Q9UMR3 447 aa11.46□□□□□ -0.57
CHMP2A-202ENST00000596708 ASB3Q9Y575 518 aa11.46□□□□□ -0.57
CHMP2A-202ENST00000596708 EML5Q05BV3 1969 aa11.46□□□□□ -0.58
CHMP2A-202ENST00000596708 ANAPC1Q9H1A4 1944 aa11.46□□□□□ -0.58
CHMP2A-202ENST00000596708 DNAH14Q0VDD8 3507 aa11.45□□□□□ -0.58
CHMP2A-202ENST00000596708 TULP1O00294 542 aaPredicted RBP11.45□□□□□ -0.58
CHMP2A-202ENST00000596708 TRAK2O60296 914 aa11.45□□□□□ -0.58
CHMP2A-202ENST00000596708 SOAT2O75908 522 aa11.45□□□□□ -0.58
CHMP2A-202ENST00000596708 GABRR2P28476 465 aa11.45□□□□□ -0.58
CHMP2A-202ENST00000596708 SOX9P48436 509 aa11.45□□□□□ -0.58
CHMP2A-202ENST00000596708 CDR1P51861 262 aa11.45□□□□□ -0.58
CHMP2A-202ENST00000596708 LILRA4P59901 499 aa11.45□□□□□ -0.58
CHMP2A-202ENST00000596708 SATB1Q01826 763 aa11.45□□□□□ -0.58
CHMP2A-202ENST00000596708 LMNB2Q03252 620 aa11.45□□□□□ -0.58
CHMP2A-202ENST00000596708 SPEM2Q0P670 501 aa11.45□□□□□ -0.58
CHMP2A-202ENST00000596708 LRRC32Q14392 662 aa11.45□□□□□ -0.58
CHMP2A-202ENST00000596708 MCM6Q14566 821 aa11.45□□□□□ -0.58
CHMP2A-202ENST00000596708 TAF12Q16514 161 aa11.45□□□□□ -0.58
CHMP2A-202ENST00000596708 STXBP5Q5T5C0 1151 aa11.45□□□□□ -0.58
CHMP2A-202ENST00000596708 GPR158Q5T848 1215 aa11.45□□□□□ -0.58
CHMP2A-202ENST00000596708 SPATA1Q5VX52 437 aa11.45□□□□□ -0.58
CHMP2A-202ENST00000596708 C1orf228Q6PIY5 440 aa11.45□□□□□ -0.58
CHMP2A-202ENST00000596708 ITIH5Q86UX2 942 aa11.45□□□□□ -0.58
CHMP2A-202ENST00000596708 RSPRY1Q96DX4 576 aa11.45□□□□□ -0.58
CHMP2A-202ENST00000596708 MSANTD3Q96H12 275 aa11.45□□□□□ -0.58
CHMP2A-202ENST00000596708 AK8Q96MA6 479 aa11.45□□□□□ -0.58
CHMP2A-202ENST00000596708 SEPT5Q99719 369 aaPredicted RBP11.45□□□□□ -0.58
CHMP2A-202ENST00000596708 PARVGQ9HBI0 331 aa11.45□□□□□ -0.58
CHMP2A-202ENST00000596708 RBM12Q9NTZ6 932 aaKnown RBP11.45□□□□□ -0.58
CHMP2A-202ENST00000596708 CACNA1AO00555 2505 aa11.44□□□□□ -0.58
CHMP2A-202ENST00000596708 CHURC1-FNTBB4DL54 471 aa11.44□□□□□ -0.58
CHMP2A-202ENST00000596708 ARNTLO00327 626 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms