RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 BFSP1Q12934 665 aa12.02□□□□□ -0.49
VRK3-210ENST00000596121 MYBPC2Q14324 1141 aa12.02□□□□□ -0.49
VRK3-210ENST00000596121 SURF1Q15526 300 aa12.02□□□□□ -0.49
VRK3-210ENST00000596121 NFIL3Q16649 462 aa12.02□□□□□ -0.49
VRK3-210ENST00000596121 COBLL1Q53SF7 1204 aa12.02□□□□□ -0.49
VRK3-210ENST00000596121 ATAT1Q5SQI0 421 aa12.02□□□□□ -0.49
VRK3-210ENST00000596121 OVOS1Q6IE37 1185 aa12.02□□□□□ -0.49
VRK3-210ENST00000596121 ZNF280DQ6N043 979 aa12.02□□□□□ -0.49
VRK3-210ENST00000596121 CES5AQ6NT32 575 aa12.02□□□□□ -0.49
VRK3-210ENST00000596121 RNF19BQ6ZMZ0 732 aa12.02□□□□□ -0.49
VRK3-210ENST00000596121 LIMS2Q7Z4I7 341 aa12.02□□□□□ -0.49
VRK3-210ENST00000596121 OSTM1Q86WC4 334 aa12.02□□□□□ -0.49
VRK3-210ENST00000596121 ZNF461Q8TAF7 563 aa12.02□□□□□ -0.49
VRK3-210ENST00000596121 SLC7A14Q8TBB6 771 aa12.02□□□□□ -0.49
VRK3-210ENST00000596121 PARD3BQ8TEW8 1205 aa12.02□□□□□ -0.49
VRK3-210ENST00000596121 EEF2KMTQ96G04 330 aa12.02□□□□□ -0.49
VRK3-210ENST00000596121 RPGRIP1Q96KN7 1286 aa12.02□□□□□ -0.49
VRK3-210ENST00000596121 PHF7Q9BWX1 381 aaPredicted RBP12.02□□□□□ -0.49
VRK3-210ENST00000596121 PRKD2Q9BZL6 878 aa12.02□□□□□ -0.49
VRK3-210ENST00000596121 CRISPLD1Q9H336 500 aa12.02□□□□□ -0.49
VRK3-210ENST00000596121 LMBRD1Q9NUN5 540 aa12.02□□□□□ -0.49
VRK3-210ENST00000596121 RMND1Q9NWS8 449 aa12.02□□□□□ -0.49
VRK3-210ENST00000596121 L1RE1Q9UN81 338 aa12.02□□□□□ -0.49
VRK3-210ENST00000596121 FAM50BQ9Y247 325 aa12.02□□□□□ -0.49
VRK3-210ENST00000596121 C2orf16Q68DN1 1984 aa12.01□□□□□ -0.49
VRK3-210ENST00000596121 TRIM49BA6NDI0 452 aa12.01□□□□□ -0.49
VRK3-210ENST00000596121 PPP1R3GB7ZBB8 358 aa12.01□□□□□ -0.49
VRK3-210ENST00000596121 BIN1O00499 593 aa12.01□□□□□ -0.49
VRK3-210ENST00000596121 CCL16O15467 120 aa12.01□□□□□ -0.49
VRK3-210ENST00000596121 CALUO43852 315 aaPredicted RBP12.01□□□□□ -0.49
VRK3-210ENST00000596121 N4BP1O75113 896 aaKnown RBP12.01□□□□□ -0.49
VRK3-210ENST00000596121 VNN1O95497 513 aa12.01□□□□□ -0.49
VRK3-210ENST00000596121 TNNC2P02585 160 aa12.01□□□□□ -0.49
VRK3-210ENST00000596121 C4BPAP04003 597 aaKnown RBP12.01□□□□□ -0.49
VRK3-210ENST00000596121 KRT19P08727 400 aa12.01□□□□□ -0.49
VRK3-210ENST00000596121 ODC1P11926 461 aa12.01□□□□□ -0.49
VRK3-210ENST00000596121 TNNI1P19237 187 aa12.01□□□□□ -0.49
VRK3-210ENST00000596121 NR2F2P24468 414 aa12.01□□□□□ -0.49
VRK3-210ENST00000596121 MTHFRP42898 656 aa12.01□□□□□ -0.49
VRK3-210ENST00000596121 MCCD1P59942 119 aaPredicted RBP12.01□□□□□ -0.49
VRK3-210ENST00000596121 NTHL1P78549 312 aa12.01□□□□□ -0.49
VRK3-210ENST00000596121 MORC3Q14149 939 aa12.01□□□□□ -0.49
VRK3-210ENST00000596121 CAMK4Q16566 473 aa12.01□□□□□ -0.49
VRK3-210ENST00000596121 CCDC142Q17RM4 750 aa12.01□□□□□ -0.49
VRK3-210ENST00000596121 CEP135Q66GS9 1140 aa12.01□□□□□ -0.49
VRK3-210ENST00000596121 ANKRD40Q6AI12 368 aa12.01□□□□□ -0.49
VRK3-210ENST00000596121 CENPPQ6IPU0 288 aa12.01□□□□□ -0.49
VRK3-210ENST00000596121 C15orf39Q6ZRI6 1047 aa12.01□□□□□ -0.49
VRK3-210ENST00000596121 LRRTM3Q86VH5 581 aa12.01□□□□□ -0.49
VRK3-210ENST00000596121 PDCL2Q8N4E4 241 aa12.01□□□□□ -0.49
VRK3-210ENST00000596121 LRRC52Q8N7C0 313 aa12.01□□□□□ -0.49
VRK3-210ENST00000596121 HPDLQ96IR7 371 aa12.01□□□□□ -0.49
VRK3-210ENST00000596121 ANKRD36BP1Q96IX9 119 aa12.01□□□□□ -0.49
VRK3-210ENST00000596121 ZDHHC7Q9NXF8 308 aa12.01□□□□□ -0.49
VRK3-210ENST00000596121 GDAP2Q9NXN4 497 aa12.01□□□□□ -0.49
VRK3-210ENST00000596121 TSC2P49815 1807 aa12□□□□□ -0.49
VRK3-210ENST00000596121 C2CD4DB7Z1M9 353 aa12□□□□□ -0.49
VRK3-210ENST00000596121 NRG2O14511 850 aaPredicted RBP12□□□□□ -0.49
VRK3-210ENST00000596121 ATF2P15336 505 aa12□□□□□ -0.49
VRK3-210ENST00000596121 PAX3P23760 479 aa12□□□□□ -0.49
VRK3-210ENST00000596121 SSTR3P32745 418 aaPredicted RBP12□□□□□ -0.49
VRK3-210ENST00000596121 PNPLA4P41247 253 aa12□□□□□ -0.49
VRK3-210ENST00000596121 MYL6P60660 151 aa12□□□□□ -0.49
VRK3-210ENST00000596121 ADCY1Q08828 1119 aa12□□□□□ -0.49
VRK3-210ENST00000596121 GPR17Q13304 367 aa12□□□□□ -0.49
VRK3-210ENST00000596121 ADAM9Q13443 819 aa12□□□□□ -0.49
VRK3-210ENST00000596121 SOWAHAQ2M3V2 549 aa12□□□□□ -0.49
VRK3-210ENST00000596121 SV2CQ496J9 727 aa12□□□□□ -0.49
VRK3-210ENST00000596121 TDRD10Q5VZ19 366 aaKnown RBP12□□□□□ -0.49
VRK3-210ENST00000596121 POTEHQ6S545 545 aa12□□□□□ -0.49
VRK3-210ENST00000596121 USP37Q86T82 979 aa12□□□□□ -0.49
VRK3-210ENST00000596121 RNF135Q8IUD6 432 aa12□□□□□ -0.49
VRK3-210ENST00000596121 ZC3H3Q8IXZ2 948 aaKnown RBP12□□□□□ -0.49
VRK3-210ENST00000596121 TCEAL8Q8IYN2 117 aa12□□□□□ -0.49
VRK3-210ENST00000596121 SMG7Q92540 1137 aaKnown RBP12□□□□□ -0.49
VRK3-210ENST00000596121 CCDC34Q96HJ3 373 aa12□□□□□ -0.49
VRK3-210ENST00000596121 RIPOR3Q96MK2 946 aa12□□□□□ -0.49
VRK3-210ENST00000596121 NECTIN4Q96NY8 510 aa12□□□□□ -0.49
VRK3-210ENST00000596121 PGLYRP2Q96PD5 576 aa12□□□□□ -0.49
VRK3-210ENST00000596121 FNBP1Q96RU3 617 aa12□□□□□ -0.49
VRK3-210ENST00000596121 DUSP9Q99956 384 aaKnown RBP12□□□□□ -0.49
VRK3-210ENST00000596121 RHOBTB2Q9BYZ6 727 aa12□□□□□ -0.49
VRK3-210ENST00000596121 ZCWPW1Q9H0M4 648 aa12□□□□□ -0.49
VRK3-210ENST00000596121 XYLT2Q9H1B5 865 aa12□□□□□ -0.49
VRK3-210ENST00000596121 EPHX3Q9H6B9 360 aa12□□□□□ -0.49
VRK3-210ENST00000596121 TMLHEQ9NVH6 421 aa12□□□□□ -0.49
VRK3-210ENST00000596121 HCFC1R1Q9NWW0 138 aa12□□□□□ -0.49
VRK3-210ENST00000596121 NME7Q9Y5B8 376 aa12□□□□□ -0.49
VRK3-210ENST00000596121 SNX9Q9Y5X1 595 aa12□□□□□ -0.49
VRK3-210ENST00000596121 ARHGEF37A1IGU5 675 aa11.99□□□□□ -0.49
VRK3-210ENST00000596121 OR6C75A6NL08 312 aa11.99□□□□□ -0.49
VRK3-210ENST00000596121 SPDYE4A6NLX3 237 aa11.99□□□□□ -0.49
VRK3-210ENST00000596121 LRRN2O75325 713 aa11.99□□□□□ -0.49
VRK3-210ENST00000596121 KIF20AO95235 890 aa11.99□□□□□ -0.49
VRK3-210ENST00000596121 CPB1P15086 417 aa11.99□□□□□ -0.49
VRK3-210ENST00000596121 PPP3CAQ08209 521 aa11.99□□□□□ -0.49
VRK3-210ENST00000596121 UVSSAQ2YD98 709 aa11.99□□□□□ -0.49
VRK3-210ENST00000596121 EDRF1Q3B7T1 1238 aa11.99□□□□□ -0.49
VRK3-210ENST00000596121 PPM1LQ5SGD2 360 aa11.99□□□□□ -0.49
VRK3-210ENST00000596121 LIN9Q5TKA1 542 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms