RNA–Protein interactions for RNA: ENST00000595858.5

DDX49-204, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-204ENST00000595858 NDST4Q9H3R1 872 aa16.07■□□□□ 0.16
DDX49-204ENST00000595858 NGRNQ9NPE2 291 aaKnown RBP16.07■□□□□ 0.16
DDX49-204ENST00000595858 ENTPD7Q9NQZ7 604 aa16.07■□□□□ 0.16
DDX49-204ENST00000595858 LIMA1Q9UHB6 759 aaKnown RBP16.07■□□□□ 0.16
DDX49-204ENST00000595858 TIMM13Q9Y5L4 95 aaPredicted RBP16.07■□□□□ 0.16
DDX49-204ENST00000595858 URODP06132 367 aa16.06■□□□□ 0.16
DDX49-204ENST00000595858 CETN1Q12798 172 aa16.06■□□□□ 0.16
DDX49-204ENST00000595858 MRPL43Q8N983 215 aaKnown RBP16.06■□□□□ 0.16
DDX49-204ENST00000595858 APPL2Q8NEU8 664 aa16.06■□□□□ 0.16
DDX49-204ENST00000595858 ANKRD20A12PQ8NF67 263 aa16.06■□□□□ 0.16
DDX49-204ENST00000595858 RIN2Q8WYP3 895 aaPredicted RBP16.06■□□□□ 0.16
DDX49-204ENST00000595858 IMPG2Q9BZV3 1241 aa16.06■□□□□ 0.16
DDX49-204ENST00000595858 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.06■□□□□ 0.169e-13■■■■■ 192.3
DDX49-204ENST00000595858 MRPL17Q9NRX2 175 aaKnown RBP16.06■□□□□ 0.16
DDX49-204ENST00000595858 MTMR10Q9NXD2 777 aa16.06■□□□□ 0.16
DDX49-204ENST00000595858 TAB2Q9NYJ8 693 aa16.06■□□□□ 0.16
DDX49-204ENST00000595858 LMCD1Q9NZU5 365 aa16.06■□□□□ 0.16
DDX49-204ENST00000595858 PCDHGC5Q9Y5F6 944 aa16.06■□□□□ 0.16
DDX49-204ENST00000595858 ARHGEF37A1IGU5 675 aa16.05■□□□□ 0.16
DDX49-204ENST00000595858 C2CD2LO14523 706 aa16.05■□□□□ 0.16
DDX49-204ENST00000595858 LILRB3O75022 631 aa16.05■□□□□ 0.16
DDX49-204ENST00000595858 ODC1P11926 461 aa16.05■□□□□ 0.16
DDX49-204ENST00000595858 TYMPP19971 482 aa16.05■□□□□ 0.16
DDX49-204ENST00000595858 PTPN14Q15678 1187 aa16.05■□□□□ 0.16
DDX49-204ENST00000595858 ZNF667Q5HYK9 610 aa16.05■□□□□ 0.16
DDX49-204ENST00000595858 PLPP4Q5VZY2 271 aa16.05■□□□□ 0.16
DDX49-204ENST00000595858 SPOPLQ6IQ16 392 aa16.05■□□□□ 0.16
DDX49-204ENST00000595858 GPR65Q8IYL9 337 aa16.05■□□□□ 0.16
DDX49-204ENST00000595858 PIK3R5Q8WYR1 880 aa16.05■□□□□ 0.16
DDX49-204ENST00000595858 CDX2Q99626 313 aaPredicted RBP16.05■□□□□ 0.16
DDX49-204ENST00000595858 VPS16Q9H269 839 aa16.05■□□□□ 0.16
DDX49-204ENST00000595858 NXF1Q9UBU9 619 aaKnown RBP16.05■□□□□ 0.16
DDX49-204ENST00000595858 SSX2IPQ9Y2D8 614 aa16.05■□□□□ 0.16
DDX49-204ENST00000595858 IRAK3Q9Y616 596 aa16.05■□□□□ 0.16
DDX49-204ENST00000595858 GOLGA6L19H0YKK7 550 aa16.05■□□□□ 0.16
DDX49-204ENST00000595858 HUS1O60921 280 aa16.05■□□□□ 0.16
DDX49-204ENST00000595858 CYP11A1P05108 521 aa16.05■□□□□ 0.16
DDX49-204ENST00000595858 POU3F3P20264 500 aaPredicted RBP16.05■□□□□ 0.16
DDX49-204ENST00000595858 IGFBP4P22692 258 aa16.05■□□□□ 0.16
DDX49-204ENST00000595858 NOP14P78316 857 aaKnown RBP16.05■□□□□ 0.16
DDX49-204ENST00000595858 MRPL58Q14197 206 aaKnown RBP16.05■□□□□ 0.16
DDX49-204ENST00000595858 SMC1AQ14683 1233 aaKnown RBP16.05■□□□□ 0.16
DDX49-204ENST00000595858 SOWAHAQ2M3V2 549 aa16.05■□□□□ 0.16
DDX49-204ENST00000595858 VARS2Q5ST30 1063 aaKnown RBP16.05■□□□□ 0.16
DDX49-204ENST00000595858 WSCD1Q658N2 575 aa16.05■□□□□ 0.16
DDX49-204ENST00000595858 PRSS55Q6UWB4 352 aaPredicted RBP16.05■□□□□ 0.16
DDX49-204ENST00000595858 ANKS3Q6ZW76 656 aa16.05■□□□□ 0.16
DDX49-204ENST00000595858 DPH6Q7L8W6 267 aa16.05■□□□□ 0.16
DDX49-204ENST00000595858 APTXQ7Z2E3 356 aaKnown RBP16.05■□□□□ 0.16
DDX49-204ENST00000595858 LIMS2Q7Z4I7 341 aa16.05■□□□□ 0.16
DDX49-204ENST00000595858 TOP6BLQ8N6T0 577 aa16.05■□□□□ 0.16
DDX49-204ENST00000595858 CCDC150Q8NCX0 1101 aa16.05■□□□□ 0.16
DDX49-204ENST00000595858 LMO3Q8TAP4 145 aa16.05■□□□□ 0.16
DDX49-204ENST00000595858 LNX1Q8TBB1 728 aaPredicted RBP16.05■□□□□ 0.16
DDX49-204ENST00000595858 GUCD1Q96NT3 240 aa16.05■□□□□ 0.16
DDX49-204ENST00000595858 MMS19Q96T76 1030 aa16.05■□□□□ 0.16
DDX49-204ENST00000595858 GAS2L1Q99501 681 aaPredicted RBP16.05■□□□□ 0.16
DDX49-204ENST00000595858 APOBEC3GQ9HC16 384 aaKnown RBP16.05■□□□□ 0.16
DDX49-204ENST00000595858 DSEQ9UL01 958 aa16.05■□□□□ 0.16
DDX49-204ENST00000595858 L1RE1Q9UN81 338 aa16.05■□□□□ 0.16
DDX49-204ENST00000595858 MTCH2Q9Y6C9 303 aa16.05■□□□□ 0.16
DDX49-204ENST00000595858 C2orf71A6NGG8 1288 aa16.04■□□□□ 0.16
DDX49-204ENST00000595858 HIDE1A8MVS5 230 aa16.04■□□□□ 0.16
DDX49-204ENST00000595858 PES1O00541 588 aaKnown RBP16.04■□□□□ 0.16
DDX49-204ENST00000595858 CLSTN1O94985 981 aa16.04■□□□□ 0.16
DDX49-204ENST00000595858 TPM2P07951 284 aa16.04■□□□□ 0.16
DDX49-204ENST00000595858 CA8P35219 290 aa16.04■□□□□ 0.16
DDX49-204ENST00000595858 COPB1P53618 953 aaKnown RBP16.04■□□□□ 0.16
DDX49-204ENST00000595858 TNNC1P63316 161 aa16.04■□□□□ 0.16
DDX49-204ENST00000595858 TPM4P67936 248 aa16.04■□□□□ 0.16
DDX49-204ENST00000595858 YWHAHQ04917 246 aaPredicted RBP16.04■□□□□ 0.16
DDX49-204ENST00000595858 WDR44Q5JSH3 913 aa16.04■□□□□ 0.16
DDX49-204ENST00000595858 PDCL2Q8N4E4 241 aa16.04■□□□□ 0.16
DDX49-204ENST00000595858 EHBP1Q8NDI1 1231 aa16.04■□□□□ 0.16
DDX49-204ENST00000595858 POLIQ9UNA4 740 aa16.04■□□□□ 0.16
DDX49-204ENST00000595858 VWA8A3KMH1 1905 aa16.04■□□□□ 0.16
DDX49-204ENST00000595858 COL4A4P53420 1690 aaPredicted RBP16.04■□□□□ 0.16
DDX49-204ENST00000595858 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.03■□□□□ 0.16
DDX49-204ENST00000595858 GTPBP10A4D1E9 387 aaKnown RBP16.03■□□□□ 0.16
DDX49-204ENST00000595858 OAZ2O95190 189 aa16.03■□□□□ 0.16
DDX49-204ENST00000595858 OVOS1Q6IE37 1185 aa16.03■□□□□ 0.16
DDX49-204ENST00000595858 PDXDC1Q6P996 788 aa16.03■□□□□ 0.16
DDX49-204ENST00000595858 METTL23Q86XA0 190 aa16.03■□□□□ 0.16
DDX49-204ENST00000595858 RNF214Q8ND24 703 aa16.03■□□□□ 0.16
DDX49-204ENST00000595858 MYLIPQ8WY64 445 aa16.03■□□□□ 0.16
DDX49-204ENST00000595858 TATDN2Q93075 761 aa16.03■□□□□ 0.16
DDX49-204ENST00000595858 CRACR2AQ9BSW2 395 aa16.03■□□□□ 0.16
DDX49-204ENST00000595858 RXFP1Q9HBX9 757 aa16.03■□□□□ 0.16
DDX49-204ENST00000595858 P4HA1P13674 534 aa16.03■□□□□ 0.16
DDX49-204ENST00000595858 PSMD5Q16401 504 aa16.03■□□□□ 0.16
DDX49-204ENST00000595858 GBP6Q6ZN66 633 aa16.03■□□□□ 0.16
DDX49-204ENST00000595858 TMEM86AQ8N2M4 240 aa16.03■□□□□ 0.16
DDX49-204ENST00000595858 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.03■□□□□ 0.16
DDX49-204ENST00000595858 FNIP2Q9P278 1114 aa16.03■□□□□ 0.16
DDX49-204ENST00000595858 PRRC2BQ5JSZ5 2229 aaKnown RBP16.03■□□□□ 0.16
DDX49-204ENST00000595858 H7C4K7 107 aa16.02■□□□□ 0.16
DDX49-204ENST00000595858 TBC1D4O60343 1298 aa16.02■□□□□ 0.16
DDX49-204ENST00000595858 CNPP09543 421 aaKnown RBP16.02■□□□□ 0.16
DDX49-204ENST00000595858 FAM163BP0C2L3 166 aa16.02■□□□□ 0.16
DDX49-204ENST00000595858 RPL17P18621 184 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms