RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 RNF149Q8NC42 400 aa14□□□□□ -0.17
SCAF1-202ENST00000595242 CCDC51Q96ER9 411 aa14□□□□□ -0.17
SCAF1-202ENST00000595242 MTMR9Q96QG7 549 aa14□□□□□ -0.17
SCAF1-202ENST00000595242 HSD3B7Q9H2F3 369 aa14□□□□□ -0.17
SCAF1-202ENST00000595242 SMOC1Q9H4F8 434 aa14□□□□□ -0.17
SCAF1-202ENST00000595242 AVENQ9NQS1 362 aaPredicted RBP14□□□□□ -0.17
SCAF1-202ENST00000595242 RBM12Q9NTZ6 932 aaKnown RBP14□□□□□ -0.17
SCAF1-202ENST00000595242 C2orf42Q9NWW7 574 aa14□□□□□ -0.17
SCAF1-202ENST00000595242 KLK14Q9P0G3 267 aa14□□□□□ -0.17
SCAF1-202ENST00000595242 ASCC3Q8N3C0 2202 aaKnown RBP14□□□□□ -0.17
SCAF1-202ENST00000595242 CCNT1O60563 726 aaKnown RBP13.99□□□□□ -0.17
SCAF1-202ENST00000595242 KIF4AO95239 1232 aa13.99□□□□□ -0.17
SCAF1-202ENST00000595242 TOP3BO95985 862 aaKnown RBP13.99□□□□□ -0.17
SCAF1-202ENST00000595242 HOXA6P31267 233 aa13.99□□□□□ -0.17
SCAF1-202ENST00000595242 RAP1GAPP47736 663 aa13.99□□□□□ -0.17
SCAF1-202ENST00000595242 FXR2P51116 673 aaKnown RBP eCLIP13.99□□□□□ -0.17
SCAF1-202ENST00000595242 NPEPPSP55786 919 aa13.99□□□□□ -0.17
SCAF1-202ENST00000595242 ZNF252P-AS1Q0IIN9 211 aa13.99□□□□□ -0.17
SCAF1-202ENST00000595242 VITQ6UXI7 678 aa13.99□□□□□ -0.17
SCAF1-202ENST00000595242 Q6ZS52 159 aa13.99□□□□□ -0.17
SCAF1-202ENST00000595242 CACNA2D4Q7Z3S7 1137 aa13.99□□□□□ -0.17
SCAF1-202ENST00000595242 WDR5BQ86VZ2 330 aa13.99□□□□□ -0.17
SCAF1-202ENST00000595242 ENOX1Q8TC92 643 aaKnown RBP13.99□□□□□ -0.17
SCAF1-202ENST00000595242 ZCCHC14Q8WYQ9 949 aaKnown RBP13.99□□□□□ -0.17
SCAF1-202ENST00000595242 GATA6Q92908 595 aa13.99□□□□□ -0.17
SCAF1-202ENST00000595242 ASB16Q96NS5 453 aa13.99□□□□□ -0.17
SCAF1-202ENST00000595242 THADAQ6YHU6 1953 aa13.98□□□□□ -0.17
SCAF1-202ENST00000595242 CASTOR2A6NHX0 329 aa13.98□□□□□ -0.17
SCAF1-202ENST00000595242 TAF4O00268 1085 aa13.98□□□□□ -0.17
SCAF1-202ENST00000595242 ASAP2O43150 1006 aa13.98□□□□□ -0.17
SCAF1-202ENST00000595242 USP11P51784 963 aa13.98□□□□□ -0.17
SCAF1-202ENST00000595242 MLLT6P55198 1093 aaPredicted RBP13.98□□□□□ -0.17
SCAF1-202ENST00000595242 PSMC5P62195 406 aa13.98□□□□□ -0.17
SCAF1-202ENST00000595242 TUSC3Q13454 348 aa13.98□□□□□ -0.17
SCAF1-202ENST00000595242 PCBP1Q15365 356 aaKnown RBP eCLIP13.98□□□□□ -0.17
SCAF1-202ENST00000595242 PRSS36Q5K4E3 855 aa13.98□□□□□ -0.17
SCAF1-202ENST00000595242 B3GNT9Q6UX72 402 aa13.98□□□□□ -0.17
SCAF1-202ENST00000595242 KBTBD6Q86V97 674 aa13.98□□□□□ -0.17
SCAF1-202ENST00000595242 EXOC8Q8IYI6 725 aa13.98□□□□□ -0.17
SCAF1-202ENST00000595242 GRAMD1CQ8IYS0 662 aa13.98□□□□□ -0.17
SCAF1-202ENST00000595242 ABCA7Q8IZY2 2146 aa13.98□□□□□ -0.17
SCAF1-202ENST00000595242 GAB3Q8WWW8 586 aa13.98□□□□□ -0.17
SCAF1-202ENST00000595242 MTRQ99707 1265 aa13.98□□□□□ -0.17
SCAF1-202ENST00000595242 DHX33Q9H6R0 707 aaKnown RBP13.98□□□□□ -0.17
SCAF1-202ENST00000595242 BMP2KQ9NSY1 1161 aaPredicted RBP13.98□□□□□ -0.17
SCAF1-202ENST00000595242 CDY1Q9Y6F8 540 aa13.98□□□□□ -0.17
SCAF1-202ENST00000595242 FREM2Q5SZK8 3169 aa13.97□□□□□ -0.17
SCAF1-202ENST00000595242 ZNF263O14978 683 aa13.97□□□□□ -0.17
SCAF1-202ENST00000595242 SLC26A4O43511 780 aa13.97□□□□□ -0.17
SCAF1-202ENST00000595242 RPP40O75818 363 aaKnown RBP13.97□□□□□ -0.17
SCAF1-202ENST00000595242 MPLP40238 635 aa13.97□□□□□ -0.17
SCAF1-202ENST00000595242 VIPR2P41587 438 aa13.97□□□□□ -0.17
SCAF1-202ENST00000595242 STAT6P42226 847 aa13.97□□□□□ -0.17
SCAF1-202ENST00000595242 ELAVL2Q12926 359 aaKnown RBP13.97□□□□□ -0.17
SCAF1-202ENST00000595242 WDR44Q5JSH3 913 aa13.97□□□□□ -0.17
SCAF1-202ENST00000595242 TCEAL6Q6IPX3 200 aa13.97□□□□□ -0.17
SCAF1-202ENST00000595242 C1orf228Q6PIY5 440 aa13.97□□□□□ -0.17
SCAF1-202ENST00000595242 POTEDQ86YR6 584 aa13.97□□□□□ -0.17
SCAF1-202ENST00000595242 DEPDC1BQ8WUY9 529 aa13.97□□□□□ -0.17
SCAF1-202ENST00000595242 TCP11Q8WWU5 503 aa13.97□□□□□ -0.17
SCAF1-202ENST00000595242 TCEAL3Q969E4 200 aa13.97□□□□□ -0.17
SCAF1-202ENST00000595242 TCEAL4Q96EI5 215 aa13.97□□□□□ -0.17
SCAF1-202ENST00000595242 CEP170P1Q96L14 293 aa13.97□□□□□ -0.17
SCAF1-202ENST00000595242 ZSWIM3Q96MP5 696 aa13.97□□□□□ -0.17
SCAF1-202ENST00000595242 CORO1BQ9BR76 489 aa13.97□□□□□ -0.17
SCAF1-202ENST00000595242 SCNM1Q9BWG6 230 aa13.97□□□□□ -0.17
SCAF1-202ENST00000595242 KBTBD4Q9NVX7 518 aa13.97□□□□□ -0.17
SCAF1-202ENST00000595242 PARP2Q9UGN5 583 aa13.97□□□□□ -0.17
SCAF1-202ENST00000595242 PCDHGA5Q9Y5G8 931 aa13.97□□□□□ -0.17
SCAF1-202ENST00000595242 ZMYM2Q9UBW7 1377 aa13.96□□□□□ -0.17
SCAF1-202ENST00000595242 IGSF10Q6WRI0 2623 aa13.96□□□□□ -0.17
SCAF1-202ENST00000595242 PI4KAP42356 2102 aa13.96□□□□□ -0.17
SCAF1-202ENST00000595242 CYP3A7-CYP3A51PA0A087WV96 503 aa13.96□□□□□ -0.17
SCAF1-202ENST00000595242 WDR27A2RRH5 827 aa13.96□□□□□ -0.17
SCAF1-202ENST00000595242 INO80B-WBP1J3KQ70 363 aa13.96□□□□□ -0.17
SCAF1-202ENST00000595242 ARNTLO00327 626 aa13.96□□□□□ -0.17
SCAF1-202ENST00000595242 MICAL2O94851 1124 aa13.96□□□□□ -0.17
SCAF1-202ENST00000595242 LRG1P02750 347 aa13.96□□□□□ -0.17
SCAF1-202ENST00000595242 ZNF18P17022 549 aa13.96□□□□□ -0.17
SCAF1-202ENST00000595242 ARF4P18085 180 aaPredicted RBP13.96□□□□□ -0.17
SCAF1-202ENST00000595242 CYP3A7P24462 503 aa13.96□□□□□ -0.17
SCAF1-202ENST00000595242 RFC5P40937 340 aa13.96□□□□□ -0.17
SCAF1-202ENST00000595242 UBA7P41226 1012 aa13.96□□□□□ -0.17
SCAF1-202ENST00000595242 AFMP43652 599 aa13.96□□□□□ -0.17
SCAF1-202ENST00000595242 PTENP60484 403 aa13.96□□□□□ -0.17
SCAF1-202ENST00000595242 SPIRE1Q08AE8 756 aa13.96□□□□□ -0.17
SCAF1-202ENST00000595242 CUL4BQ13620 913 aa13.96□□□□□ -0.17
SCAF1-202ENST00000595242 PDIA5Q14554 519 aa13.96□□□□□ -0.17
SCAF1-202ENST00000595242 DHX8Q14562 1220 aaKnown RBP13.96□□□□□ -0.17
SCAF1-202ENST00000595242 KCNB1Q14721 858 aa13.96□□□□□ -0.17
SCAF1-202ENST00000595242 KARSQ15046 597 aaKnown RBP13.96□□□□□ -0.17
SCAF1-202ENST00000595242 CALCRLQ16602 461 aa13.96□□□□□ -0.17
SCAF1-202ENST00000595242 DGKKQ5KSL6 1271 aa13.96□□□□□ -0.17
SCAF1-202ENST00000595242 SH3PXD2AQ5TCZ1 1133 aa13.96□□□□□ -0.17
SCAF1-202ENST00000595242 ISM2Q6H9L7 571 aa13.96□□□□□ -0.17
SCAF1-202ENST00000595242 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.96□□□□□ -0.17
SCAF1-202ENST00000595242 CSGALNACT1Q8TDX6 532 aa13.96□□□□□ -0.17
SCAF1-202ENST00000595242 SMARCD2Q92925 531 aa13.96□□□□□ -0.17
SCAF1-202ENST00000595242 KCNF1Q9H3M0 494 aa13.96□□□□□ -0.17
SCAF1-202ENST00000595242 VPS45Q9NRW7 570 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms