RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 PCIF1Q9H4Z3 704 aa19.15■□□□□ 0.66
SHKBP1-204ENST00000594862 KCNK12Q9HB15 430 aa19.15■□□□□ 0.66
SHKBP1-204ENST00000594862 AGPAT3Q9NRZ7 376 aa19.15■□□□□ 0.66
SHKBP1-204ENST00000594862 HSPBP1Q9NZL4 362 aa19.15■□□□□ 0.66
SHKBP1-204ENST00000594862 HSFX1Q9UBD0 423 aa19.15■□□□□ 0.66
SHKBP1-204ENST00000594862 CDH7Q9ULB5 785 aa19.15■□□□□ 0.66
SHKBP1-204ENST00000594862 DUSP12Q9UNI6 340 aa19.15■□□□□ 0.66
SHKBP1-204ENST00000594862 GOLGA8IPA6NC78 632 aa19.14■□□□□ 0.65
SHKBP1-204ENST00000594862 GOLGA8JA6NMD2 632 aa19.14■□□□□ 0.65
SHKBP1-204ENST00000594862 KPNA7A9QM74 516 aa19.14■□□□□ 0.65
SHKBP1-204ENST00000594862 PPEF2O14830 753 aa19.14■□□□□ 0.65
SHKBP1-204ENST00000594862 N4BP1O75113 896 aaKnown RBP19.14■□□□□ 0.65
SHKBP1-204ENST00000594862 PRPF40AO75400 957 aaKnown RBP19.14■□□□□ 0.65
SHKBP1-204ENST00000594862 KIF20AO95235 890 aa19.14■□□□□ 0.65
SHKBP1-204ENST00000594862 PTPN2P17706 415 aa19.14■□□□□ 0.65
SHKBP1-204ENST00000594862 ADCY1Q08828 1119 aa19.14■□□□□ 0.65
SHKBP1-204ENST00000594862 IQCEQ6IPM2 695 aa19.14■□□□□ 0.65
SHKBP1-204ENST00000594862 C12orf56Q8IXR9 622 aa19.14■□□□□ 0.65
SHKBP1-204ENST00000594862 FBXL6Q8N531 539 aa19.14■□□□□ 0.65
SHKBP1-204ENST00000594862 GLIS3Q8NEA6 775 aa19.14■□□□□ 0.65
SHKBP1-204ENST00000594862 SPATA18Q8TC71 538 aa19.14■□□□□ 0.65
SHKBP1-204ENST00000594862 ASIC4Q96FT7 647 aa19.14■□□□□ 0.65
SHKBP1-204ENST00000594862 ANKRD36BP1Q96IX9 119 aa19.14■□□□□ 0.65
SHKBP1-204ENST00000594862 TIMM13Q9Y5L4 95 aaPredicted RBP19.14■□□□□ 0.65
SHKBP1-204ENST00000594862 TECTAO75443 2155 aa19.14■□□□□ 0.65
SHKBP1-204ENST00000594862 TCHHQ07283 1943 aa19.13■□□□□ 0.65
SHKBP1-204ENST00000594862 CYB561D2O14569 222 aa19.13■□□□□ 0.65
SHKBP1-204ENST00000594862 ZNF197O14709 1029 aa19.13■□□□□ 0.65
SHKBP1-204ENST00000594862 SPTLC1O15269 473 aa19.13■□□□□ 0.65
SHKBP1-204ENST00000594862 MICAL2O94851 1124 aa19.13■□□□□ 0.65
SHKBP1-204ENST00000594862 TNNC2P02585 160 aa19.13■□□□□ 0.65
SHKBP1-204ENST00000594862 HOXD13P35453 343 aa19.13■□□□□ 0.65
SHKBP1-204ENST00000594862 RBP5P82980 135 aa19.13■□□□□ 0.65
SHKBP1-204ENST00000594862 KNOP1Q1ED39 458 aaKnown RBP19.13■□□□□ 0.65
SHKBP1-204ENST00000594862 WDR49Q8IV35 697 aa19.13■□□□□ 0.65
SHKBP1-204ENST00000594862 XXYLT1Q8NBI6 393 aa19.13■□□□□ 0.65
SHKBP1-204ENST00000594862 C2orf15Q8WU43 125 aaKnown RBP19.13■□□□□ 0.65
SHKBP1-204ENST00000594862 PRRX2Q99811 253 aa19.13■□□□□ 0.65
SHKBP1-204ENST00000594862 SLC39A2Q9NP94 309 aa19.13■□□□□ 0.65
SHKBP1-204ENST00000594862 DNMT3BQ9UBC3 853 aaKnown RBP19.13■□□□□ 0.65
SHKBP1-204ENST00000594862 MRPS23Q9Y3D9 190 aaKnown RBP19.13■□□□□ 0.65
SHKBP1-204ENST00000594862 DOCK8Q8NF50 2099 aa19.12■□□□□ 0.65
SHKBP1-204ENST00000594862 ANHXE9PGG2 379 aa19.12■□□□□ 0.65
SHKBP1-204ENST00000594862 TGFB1I1O43294 461 aa19.12■□□□□ 0.65
SHKBP1-204ENST00000594862 ITGB3P05106 788 aa19.12■□□□□ 0.65
SHKBP1-204ENST00000594862 POLR2BP30876 1174 aaKnown RBP19.12■□□□□ 0.65
SHKBP1-204ENST00000594862 MYO1EQ12965 1108 aa19.12■□□□□ 0.65
SHKBP1-204ENST00000594862 SNRNP35Q16560 246 aaKnown RBP19.12■□□□□ 0.65
SHKBP1-204ENST00000594862 RNF19BQ6ZMZ0 732 aa19.12■□□□□ 0.65
SHKBP1-204ENST00000594862 ALYREFQ86V81 257 aaKnown RBP19.12■□□□□ 0.65
SHKBP1-204ENST00000594862 TMEM86AQ8N2M4 240 aa19.12■□□□□ 0.65
SHKBP1-204ENST00000594862 C1orf127Q8N9H9 656 aa19.12■□□□□ 0.65
SHKBP1-204ENST00000594862 FSIP1Q8NA03 581 aa19.12■□□□□ 0.65
SHKBP1-204ENST00000594862 FGF13Q92913 245 aa19.12■□□□□ 0.65
SHKBP1-204ENST00000594862 ZNF512Q96ME7 567 aaPredicted RBP19.12■□□□□ 0.65
SHKBP1-204ENST00000594862 PDE11AQ9HCR9 933 aa19.12■□□□□ 0.65
SHKBP1-204ENST00000594862 INTS13Q9NVM9 706 aa19.12■□□□□ 0.65
SHKBP1-204ENST00000594862 GDE1Q9NZC3 331 aa19.12■□□□□ 0.65
SHKBP1-204ENST00000594862 AGAP1Q9UPQ3 857 aa19.12■□□□□ 0.65
SHKBP1-204ENST00000594862 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.11■□□□□ 0.65
SHKBP1-204ENST00000594862 TULP1O00294 542 aaPredicted RBP19.11■□□□□ 0.65
SHKBP1-204ENST00000594862 HUS1O60921 280 aa19.11■□□□□ 0.65
SHKBP1-204ENST00000594862 SEC24AO95486 1093 aa19.11■□□□□ 0.65
SHKBP1-204ENST00000594862 RHOP08100 348 aa19.11■□□□□ 0.65
SHKBP1-204ENST00000594862 CASP1P29466 404 aa19.11■□□□□ 0.65
SHKBP1-204ENST00000594862 NDUFA8P51970 172 aa19.11■□□□□ 0.65
SHKBP1-204ENST00000594862 NTHL1P78549 312 aa19.11■□□□□ 0.65
SHKBP1-204ENST00000594862 HTR4Q13639 388 aa19.11■□□□□ 0.65
SHKBP1-204ENST00000594862 DUOXA2Q1HG44 320 aa19.11■□□□□ 0.65
SHKBP1-204ENST00000594862 CYP4A22Q5TCH4 519 aa19.11■□□□□ 0.65
SHKBP1-204ENST00000594862 PDZD4Q76G19 769 aaPredicted RBP19.11■□□□□ 0.65
SHKBP1-204ENST00000594862 CBWD2Q8IUF1 395 aa19.11■□□□□ 0.65
SHKBP1-204ENST00000594862 NELFCDQ8IXH7 590 aa19.11■□□□□ 0.65
SHKBP1-204ENST00000594862 GRAMD1CQ8IYS0 662 aa19.11■□□□□ 0.65
SHKBP1-204ENST00000594862 TMEM130Q8N3G9 435 aa19.11■□□□□ 0.65
SHKBP1-204ENST00000594862 ZSWIM2Q8NEG5 633 aa19.11■□□□□ 0.65
SHKBP1-204ENST00000594862 FNBP1Q96RU3 617 aa19.11■□□□□ 0.65
SHKBP1-204ENST00000594862 MTMR12Q9C0I1 747 aa19.11■□□□□ 0.65
SHKBP1-204ENST00000594862 YIPF1Q9Y548 306 aa19.11■□□□□ 0.65
SHKBP1-204ENST00000594862 SCN1AP35498 2009 aa19.11■□□□□ 0.65
SHKBP1-204ENST00000594862 GOLGA6L4A6NEF3 574 aa19.1■□□□□ 0.65
SHKBP1-204ENST00000594862 KLRC4O43908 158 aa19.1■□□□□ 0.65
SHKBP1-204ENST00000594862 KRT19P08727 400 aa19.1■□□□□ 0.65
SHKBP1-204ENST00000594862 SRFP11831 508 aa19.1■□□□□ 0.65
SHKBP1-204ENST00000594862 ALDH1A3P47895 512 aa19.1■□□□□ 0.65
SHKBP1-204ENST00000594862 NUBP1P53384 320 aa19.1■□□□□ 0.65
SHKBP1-204ENST00000594862 EPHB3P54753 998 aa19.1■□□□□ 0.65
SHKBP1-204ENST00000594862 WNT7BP56706 349 aa19.1■□□□□ 0.65
SHKBP1-204ENST00000594862 TWF1Q12792 350 aa19.1■□□□□ 0.65
SHKBP1-204ENST00000594862 KMT5BQ4FZB7 885 aa19.1■□□□□ 0.65
SHKBP1-204ENST00000594862 NPAS3Q8IXF0 933 aa19.1■□□□□ 0.65
SHKBP1-204ENST00000594862 DCP1BQ8IZD4 617 aaKnown RBP19.1■□□□□ 0.65
SHKBP1-204ENST00000594862 CSGALNACT2Q8N6G5 542 aa19.1■□□□□ 0.65
SHKBP1-204ENST00000594862 TMEM174Q8WUU8 243 aa19.1■□□□□ 0.65
SHKBP1-204ENST00000594862 CORO1BQ9BR76 489 aa19.1■□□□□ 0.65
SHKBP1-204ENST00000594862 ASAH2Q9NR71 780 aa19.1■□□□□ 0.65
SHKBP1-204ENST00000594862 HCFC1R1Q9NWW0 138 aa19.1■□□□□ 0.65
SHKBP1-204ENST00000594862 GDAP2Q9NXN4 497 aa19.1■□□□□ 0.65
SHKBP1-204ENST00000594862 ASB3Q9Y575 518 aa19.1■□□□□ 0.65
SHKBP1-204ENST00000594862 MYO10Q9HD67 2058 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms