RNA–Protein interactions for RNA: ENST00000594116.1

LTBP4-209, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-209ENST00000594116 MKNK1Q9BUB5 465 aa18.39■□□□□ 0.53
LTBP4-209ENST00000594116 DUSP12Q9UNI6 340 aa18.39■□□□□ 0.53
LTBP4-209ENST00000594116 SLC16A3O15427 465 aaKnown RBP18.38■□□□□ 0.53
LTBP4-209ENST00000594116 GALR2O43603 387 aaPredicted RBP18.38■□□□□ 0.53
LTBP4-209ENST00000594116 EXOC3O60645 756 aa18.38■□□□□ 0.53
LTBP4-209ENST00000594116 RPL17P18621 184 aaKnown RBP18.38■□□□□ 0.53
LTBP4-209ENST00000594116 TNFSF9P41273 254 aa18.38■□□□□ 0.53
LTBP4-209ENST00000594116 CASP4P49662 377 aa18.38■□□□□ 0.53
LTBP4-209ENST00000594116 ELAVL2Q12926 359 aaKnown RBP18.38■□□□□ 0.53
LTBP4-209ENST00000594116 PRSS55Q6UWB4 352 aaPredicted RBP18.38■□□□□ 0.53
LTBP4-209ENST00000594116 FILIP1Q7Z7B0 1213 aa18.38■□□□□ 0.53
LTBP4-209ENST00000594116 GLYCTKQ8IVS8 523 aa18.38■□□□□ 0.53
LTBP4-209ENST00000594116 AOPEPQ8N6M6 819 aa18.38■□□□□ 0.53
LTBP4-209ENST00000594116 HASPINQ8TF76 798 aa18.38■□□□□ 0.53
LTBP4-209ENST00000594116 NOC3LQ8WTT2 800 aaKnown RBP18.38■□□□□ 0.53
LTBP4-209ENST00000594116 FAM213AQ9BRX8 229 aa18.38■□□□□ 0.53
LTBP4-209ENST00000594116 CCDC94Q9BW85 323 aaPredicted RBP18.38■□□□□ 0.53
LTBP4-209ENST00000594116 SRRTQ9BXP5 876 aaKnown RBP18.38■□□□□ 0.53
LTBP4-209ENST00000594116 PRKD2Q9BZL6 878 aa18.38■□□□□ 0.53
LTBP4-209ENST00000594116 CXCL16Q9H2A7 254 aa18.38■□□□□ 0.53
LTBP4-209ENST00000594116 CBX8Q9HC52 389 aa18.38■□□□□ 0.53
LTBP4-209ENST00000594116 EPS15L1Q9UBC2 864 aa18.38■□□□□ 0.53
LTBP4-209ENST00000594116 NFE2L3Q9Y4A8 694 aa18.38■□□□□ 0.53
LTBP4-209ENST00000594116 ZFHX2Q9C0A1 2572 aaPredicted RBP18.38■□□□□ 0.53
LTBP4-209ENST00000594116 GOLGA8IPA6NC78 632 aa18.37■□□□□ 0.53
LTBP4-209ENST00000594116 GOLGA8JA6NMD2 632 aa18.37■□□□□ 0.53
LTBP4-209ENST00000594116 TMEM189-UBE2V1I3L0A0 370 aa18.37■□□□□ 0.53
LTBP4-209ENST00000594116 ZMYND10O75800 440 aa18.37■□□□□ 0.53
LTBP4-209ENST00000594116 AKAP3O75969 853 aa18.37■□□□□ 0.53
LTBP4-209ENST00000594116 FGFR1OPO95684 399 aaKnown RBP18.37■□□□□ 0.53
LTBP4-209ENST00000594116 ADRB2P07550 413 aa18.37■□□□□ 0.53
LTBP4-209ENST00000594116 CLTAP09496 248 aa18.37■□□□□ 0.53
LTBP4-209ENST00000594116 GBP2P32456 591 aaPredicted RBP18.37■□□□□ 0.53
LTBP4-209ENST00000594116 ACOT2P49753 483 aa18.37■□□□□ 0.53
LTBP4-209ENST00000594116 CLCN5P51795 746 aa18.37■□□□□ 0.53
LTBP4-209ENST00000594116 MCCD1P59942 119 aaPredicted RBP18.37■□□□□ 0.53
LTBP4-209ENST00000594116 PSMD5Q16401 504 aa18.37■□□□□ 0.53
LTBP4-209ENST00000594116 SNRNP35Q16560 246 aaKnown RBP18.37■□□□□ 0.53
LTBP4-209ENST00000594116 SEZ6Q53EL9 994 aa18.37■□□□□ 0.53
LTBP4-209ENST00000594116 FAM171A1Q5VUB5 890 aa18.37■□□□□ 0.53
LTBP4-209ENST00000594116 CEP135Q66GS9 1140 aa18.37■□□□□ 0.53
LTBP4-209ENST00000594116 ASTLQ6HA08 431 aaPredicted RBP18.37■□□□□ 0.53
LTBP4-209ENST00000594116 PDXDC1Q6P996 788 aa18.37■□□□□ 0.53
LTBP4-209ENST00000594116 CBWD2Q8IUF1 395 aa18.37■□□□□ 0.53
LTBP4-209ENST00000594116 BRSK2Q8IWQ3 736 aa18.37■□□□□ 0.53
LTBP4-209ENST00000594116 TMEM105Q8N8V8 129 aa18.37■□□□□ 0.53
LTBP4-209ENST00000594116 LNX1Q8TBB1 728 aaPredicted RBP18.37■□□□□ 0.53
LTBP4-209ENST00000594116 PPP1R10Q96QC0 940 aaKnown RBP18.37■□□□□ 0.53
LTBP4-209ENST00000594116 MFSD1Q9H3U5 465 aa18.37■□□□□ 0.53
LTBP4-209ENST00000594116 THAP9Q9H5L6 903 aa18.37■□□□□ 0.53
LTBP4-209ENST00000594116 PIDD1Q9HB75 910 aa18.37■□□□□ 0.53
LTBP4-209ENST00000594116 FBXW11Q9UKB1 542 aa18.37■□□□□ 0.53
LTBP4-209ENST00000594116 ZNF233A6NK53 670 aa18.36■□□□□ 0.53
LTBP4-209ENST00000594116 SMTNL1A8MU46 457 aa18.36■□□□□ 0.53
LTBP4-209ENST00000594116 MEFVO15553 781 aaPredicted RBP18.36■□□□□ 0.53
LTBP4-209ENST00000594116 PSMC2P35998 433 aaKnown RBP18.36■□□□□ 0.53
LTBP4-209ENST00000594116 MARSP56192 900 aaKnown RBP18.36■□□□□ 0.53
LTBP4-209ENST00000594116 ENOX2Q16206 610 aaKnown RBP18.36■□□□□ 0.53
LTBP4-209ENST00000594116 CDKAL1Q5VV42 579 aa18.36■□□□□ 0.53
LTBP4-209ENST00000594116 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.36■□□□□ 0.53
LTBP4-209ENST00000594116 CEP57Q86XR8 500 aa18.36■□□□□ 0.53
LTBP4-209ENST00000594116 IRF2BP1Q8IU81 584 aa18.36■□□□□ 0.53
LTBP4-209ENST00000594116 NXPE3Q969Y0 559 aa18.36■□□□□ 0.53
LTBP4-209ENST00000594116 EEF2KMTQ96G04 330 aa18.36■□□□□ 0.53
LTBP4-209ENST00000594116 BORCS6Q96GS4 357 aa18.36■□□□□ 0.53
LTBP4-209ENST00000594116 UROC1Q96N76 676 aa18.36■□□□□ 0.53
LTBP4-209ENST00000594116 ACAP3Q96P50 834 aa18.36■□□□□ 0.53
LTBP4-209ENST00000594116 MYADMQ96S97 322 aa18.36■□□□□ 0.53
LTBP4-209ENST00000594116 CLSTN3Q9BQT9 956 aa18.36■□□□□ 0.53
LTBP4-209ENST00000594116 HSD3B7Q9H2F3 369 aa18.36■□□□□ 0.53
LTBP4-209ENST00000594116 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.36■□□□□ 0.53
LTBP4-209ENST00000594116 FRMD4BQ9Y2L6 1034 aa18.36■□□□□ 0.53
LTBP4-209ENST00000594116 GNA14O95837 355 aa18.35■□□□□ 0.53
LTBP4-209ENST00000594116 CXCL8P10145 99 aa18.35■□□□□ 0.53
LTBP4-209ENST00000594116 EPB41P11171 864 aaKnown RBP18.35■□□□□ 0.53
LTBP4-209ENST00000594116 OSTNP61366 133 aa18.35■□□□□ 0.53
LTBP4-209ENST00000594116 ENPEPQ07075 957 aa18.35■□□□□ 0.53
LTBP4-209ENST00000594116 CYP24A1Q07973 514 aa18.35■□□□□ 0.53
LTBP4-209ENST00000594116 TPD52L1Q16890 204 aaPredicted RBP18.35■□□□□ 0.53
LTBP4-209ENST00000594116 SLC10A6Q3KNW5 377 aa18.35■□□□□ 0.53
LTBP4-209ENST00000594116 XKR4Q5GH76 650 aa18.35■□□□□ 0.53
LTBP4-209ENST00000594116 FAM186BQ8IYM0 893 aa18.35■□□□□ 0.53
LTBP4-209ENST00000594116 SNX27Q96L92 541 aa18.35■□□□□ 0.53
LTBP4-209ENST00000594116 RPF1Q9H9Y2 349 aaKnown RBP18.35■□□□□ 0.53
LTBP4-209ENST00000594116 PLEKHA5Q9HAU0 1116 aa18.35■□□□□ 0.53
LTBP4-209ENST00000594116 RBAKQ9NYW8 714 aaPredicted RBP18.35■□□□□ 0.53
LTBP4-209ENST00000594116 DOCK6Q96HP0 2047 aa18.35■□□□□ 0.53
LTBP4-209ENST00000594116 MYO15AQ9UKN7 3530 aa18.34■□□□□ 0.53
LTBP4-209ENST00000594116 TTC26A0AVF1 554 aa18.34■□□□□ 0.53
LTBP4-209ENST00000594116 HNRNPA1P09651 372 aaKnown RBP eCLIP18.34■□□□□ 0.53
LTBP4-209ENST00000594116 ZNF18P17022 549 aa18.34■□□□□ 0.53
LTBP4-209ENST00000594116 FGFR3P22607 806 aa18.34■□□□□ 0.53
LTBP4-209ENST00000594116 HOXA9P31269 272 aa18.34■□□□□ 0.53
LTBP4-209ENST00000594116 WNT7BP56706 349 aa18.34■□□□□ 0.53
LTBP4-209ENST00000594116 PSMD6Q15008 389 aa18.34■□□□□ 0.53
LTBP4-209ENST00000594116 GLRA4Q5JXX5 417 aa18.34■□□□□ 0.53
LTBP4-209ENST00000594116 LIN9Q5TKA1 542 aa18.34■□□□□ 0.53
LTBP4-209ENST00000594116 CWF19L1Q69YN2 538 aaKnown RBP18.34■□□□□ 0.53
LTBP4-209ENST00000594116 ALKAL1Q6UXT8 129 aa18.34■□□□□ 0.53
LTBP4-209ENST00000594116 FRMD5Q7Z6J6 570 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms