RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 PSMD2Q13200 908 aa19.96■□□□□ 0.79
SHKBP1-202ENST00000593764 KRBA2Q6ZNG9 492 aa19.96■□□□□ 0.79
SHKBP1-202ENST00000593764 HFE2Q6ZVN8 426 aa19.96■□□□□ 0.79
SHKBP1-202ENST00000593764 ASIC4Q96FT7 647 aa19.96■□□□□ 0.79
SHKBP1-202ENST00000593764 TMEM209Q96SK2 561 aa19.96■□□□□ 0.79
SHKBP1-202ENST00000593764 KCNK12Q9HB15 430 aa19.96■□□□□ 0.79
SHKBP1-202ENST00000593764 EXOC1Q9NV70 894 aa19.96■□□□□ 0.79
SHKBP1-202ENST00000593764 RAPGEFL1Q9UHV5 662 aa19.96■□□□□ 0.79
SHKBP1-202ENST00000593764 SIX4Q9UIU6 781 aa19.96■□□□□ 0.79
SHKBP1-202ENST00000593764 MAFFQ9ULX9 164 aa19.96■□□□□ 0.79
SHKBP1-202ENST00000593764 PTPRJQ12913 1337 aa19.96■□□□□ 0.79
SHKBP1-202ENST00000593764 TMEM221A6NGB7 291 aa19.95■□□□□ 0.78
SHKBP1-202ENST00000593764 KPNA7A9QM74 516 aa19.95■□□□□ 0.78
SHKBP1-202ENST00000593764 M0R296 226 aa19.95■□□□□ 0.78
SHKBP1-202ENST00000593764 RPN1P04843 607 aaKnown RBP19.95■□□□□ 0.78
SHKBP1-202ENST00000593764 LAMP2P13473 410 aa19.95■□□□□ 0.78
SHKBP1-202ENST00000593764 CPB1P15086 417 aa19.95■□□□□ 0.78
SHKBP1-202ENST00000593764 FSHRP23945 695 aa19.95■□□□□ 0.78
SHKBP1-202ENST00000593764 POLR2BP30876 1174 aaKnown RBP19.95■□□□□ 0.78
SHKBP1-202ENST00000593764 CYP2J2P51589 502 aa19.95■□□□□ 0.78
SHKBP1-202ENST00000593764 DPYDQ12882 1025 aa19.95■□□□□ 0.78
SHKBP1-202ENST00000593764 GPR17Q13304 367 aa19.95■□□□□ 0.78
SHKBP1-202ENST00000593764 SNRNP35Q16560 246 aaKnown RBP19.95■□□□□ 0.78
SHKBP1-202ENST00000593764 LMBRD2Q68DH5 695 aaPredicted RBP19.95■□□□□ 0.78
SHKBP1-202ENST00000593764 GET4Q7L5D6 327 aaPredicted RBP19.95■□□□□ 0.78
SHKBP1-202ENST00000593764 HS2ST1Q7LGA3 356 aa19.95■□□□□ 0.78
SHKBP1-202ENST00000593764 C12orf56Q8IXR9 622 aa19.95■□□□□ 0.78
SHKBP1-202ENST00000593764 CSGALNACT2Q8N6G5 542 aa19.95■□□□□ 0.78
SHKBP1-202ENST00000593764 RDH13Q8NBN7 331 aa19.95■□□□□ 0.78
SHKBP1-202ENST00000593764 OR5B17Q8NGF7 314 aa19.95■□□□□ 0.78
SHKBP1-202ENST00000593764 RTP3Q9BQQ7 232 aa19.95■□□□□ 0.78
SHKBP1-202ENST00000593764 MTMR12Q9C0I1 747 aa19.95■□□□□ 0.78
SHKBP1-202ENST00000593764 INTS13Q9NVM9 706 aa19.95■□□□□ 0.78
SHKBP1-202ENST00000593764 CGNQ9P2M7 1197 aaKnown RBP19.95■□□□□ 0.78
SHKBP1-202ENST00000593764 ITGA11Q9UKX5 1188 aa19.95■□□□□ 0.78
SHKBP1-202ENST00000593764 AGAP1Q9UPQ3 857 aa19.95■□□□□ 0.78
SHKBP1-202ENST00000593764 INSL5Q9Y5Q6 135 aa19.95■□□□□ 0.78
SHKBP1-202ENST00000593764 MTMR3Q13615 1198 aa19.94■□□□□ 0.78
SHKBP1-202ENST00000593764 MYBPC2Q14324 1141 aa19.94■□□□□ 0.78
SHKBP1-202ENST00000593764 SV2CQ496J9 727 aa19.94■□□□□ 0.78
SHKBP1-202ENST00000593764 WSCD1Q658N2 575 aa19.94■□□□□ 0.78
SHKBP1-202ENST00000593764 BMP8AQ7Z5Y6 402 aa19.94■□□□□ 0.78
SHKBP1-202ENST00000593764 UBALD2Q8IYN6 164 aa19.94■□□□□ 0.78
SHKBP1-202ENST00000593764 XXYLT1Q8NBI6 393 aa19.94■□□□□ 0.78
SHKBP1-202ENST00000593764 OR10T2Q8NGX3 314 aa19.94■□□□□ 0.78
SHKBP1-202ENST00000593764 ITFG1Q8TB96 612 aa19.94■□□□□ 0.78
SHKBP1-202ENST00000593764 RSAD2Q8WXG1 361 aa19.94■□□□□ 0.78
SHKBP1-202ENST00000593764 CRISPLD1Q9H336 500 aa19.94■□□□□ 0.78
SHKBP1-202ENST00000593764 KCTD10Q9H3F6 313 aa19.94■□□□□ 0.78
SHKBP1-202ENST00000593764 DSEQ9UL01 958 aa19.94■□□□□ 0.78
SHKBP1-202ENST00000593764 WDFY4Q6ZS81 3184 aa19.93■□□□□ 0.78
SHKBP1-202ENST00000593764 LRG1P02750 347 aa19.93■□□□□ 0.78
SHKBP1-202ENST00000593764 RHOP08100 348 aa19.93■□□□□ 0.78
SHKBP1-202ENST00000593764 PNPLA4P41247 253 aa19.93■□□□□ 0.78
SHKBP1-202ENST00000593764 CYP24A1Q07973 514 aa19.93■□□□□ 0.78
SHKBP1-202ENST00000593764 SURF1Q15526 300 aa19.93■□□□□ 0.78
SHKBP1-202ENST00000593764 PABPC1LQ4VXU2 614 aaKnown RBP19.93■□□□□ 0.78
SHKBP1-202ENST00000593764 LRRC52Q8N7C0 313 aa19.93■□□□□ 0.78
SHKBP1-202ENST00000593764 ZNF560Q96MR9 790 aa19.93■□□□□ 0.78
SHKBP1-202ENST00000593764 PGLYRP2Q96PD5 576 aa19.93■□□□□ 0.78
SHKBP1-202ENST00000593764 GZF1Q9H116 711 aaPredicted RBP19.93■□□□□ 0.78
SHKBP1-202ENST00000593764 DMAC2Q9NW81 257 aa19.93■□□□□ 0.78
SHKBP1-202ENST00000593764 IGSF9Q9P2J2 1179 aa19.93■□□□□ 0.78
SHKBP1-202ENST00000593764 CDH7Q9ULB5 785 aa19.93■□□□□ 0.78
SHKBP1-202ENST00000593764 ANHXE9PGG2 379 aa19.92■□□□□ 0.78
SHKBP1-202ENST00000593764 RHOBTB3O94955 611 aa19.92■□□□□ 0.78
SHKBP1-202ENST00000593764 TMEM191BP0C7N4 346 aa19.92■□□□□ 0.78
SHKBP1-202ENST00000593764 PTPN2P17706 415 aa19.92■□□□□ 0.78
SHKBP1-202ENST00000593764 RBP5P82980 135 aa19.92■□□□□ 0.78
SHKBP1-202ENST00000593764 DUSP4Q13115 394 aa19.92■□□□□ 0.78
SHKBP1-202ENST00000593764 TDGQ13569 410 aa19.92■□□□□ 0.78
SHKBP1-202ENST00000593764 PSMD6Q15008 389 aa19.92■□□□□ 0.78
SHKBP1-202ENST00000593764 DUOXA2Q1HG44 320 aa19.92■□□□□ 0.78
SHKBP1-202ENST00000593764 SLC5A9Q2M3M2 681 aa19.92■□□□□ 0.78
SHKBP1-202ENST00000593764 CENPPQ6IPU0 288 aa19.92■□□□□ 0.78
SHKBP1-202ENST00000593764 POTEHQ6S545 545 aa19.92■□□□□ 0.78
SHKBP1-202ENST00000593764 WDR49Q8IV35 697 aa19.92■□□□□ 0.78
SHKBP1-202ENST00000593764 FMR1NBQ8N0W7 255 aaPredicted RBP19.92■□□□□ 0.78
SHKBP1-202ENST00000593764 ATAD1Q8NBU5 361 aa19.92■□□□□ 0.78
SHKBP1-202ENST00000593764 TMEM174Q8WUU8 243 aa19.92■□□□□ 0.78
SHKBP1-202ENST00000593764 FGF13Q92913 245 aa19.92■□□□□ 0.78
SHKBP1-202ENST00000593764 ANKRD36BP1Q96IX9 119 aa19.92■□□□□ 0.78
SHKBP1-202ENST00000593764 MFSD14AQ96MC6 490 aa19.92■□□□□ 0.78
SHKBP1-202ENST00000593764 ZCWPW1Q9H0M4 648 aa19.92■□□□□ 0.78
SHKBP1-202ENST00000593764 AVENQ9NQS1 362 aaPredicted RBP19.92■□□□□ 0.78
SHKBP1-202ENST00000593764 GDAP2Q9NXN4 497 aa19.92■□□□□ 0.78
SHKBP1-202ENST00000593764 CEP72Q9P209 647 aa19.92■□□□□ 0.78
SHKBP1-202ENST00000593764 ZFP37Q9Y6Q3 630 aaPredicted RBP19.92■□□□□ 0.78
SHKBP1-202ENST00000593764 TSC2P49815 1807 aa19.92■□□□□ 0.78
SHKBP1-202ENST00000593764 ZDBF2Q9HCK1 2354 aa19.92■□□□□ 0.78
SHKBP1-202ENST00000593764 MTMR11A4FU01 709 aa19.91■□□□□ 0.78
SHKBP1-202ENST00000593764 KRT19P08727 400 aa19.91■□□□□ 0.78
SHKBP1-202ENST00000593764 TWF1Q12792 350 aa19.91■□□□□ 0.78
SHKBP1-202ENST00000593764 SNW1Q13573 536 aaKnown RBP19.91■□□□□ 0.78
SHKBP1-202ENST00000593764 LRRTM3Q86VH5 581 aa19.91■□□□□ 0.78
SHKBP1-202ENST00000593764 METTL23Q86XA0 190 aa19.91■□□□□ 0.78
SHKBP1-202ENST00000593764 PDCL2Q8N4E4 241 aa19.91■□□□□ 0.78
SHKBP1-202ENST00000593764 ENGASEQ8NFI3 743 aa19.91■□□□□ 0.78
SHKBP1-202ENST00000593764 GOLGA5Q8TBA6 731 aa19.91■□□□□ 0.78
SHKBP1-202ENST00000593764 NXPE3Q969Y0 559 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms