RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 KIAA1586Q9HCI6 787 aa16.49■□□□□ 0.23
TRIM28-203ENST00000593582 AVENQ9NQS1 362 aaPredicted RBP16.49■□□□□ 0.23
TRIM28-203ENST00000593582 SERTAD1Q9UHV2 236 aa16.49■□□□□ 0.23
TRIM28-203ENST00000593582 NUMBLQ9Y6R0 609 aa16.49■□□□□ 0.23
TRIM28-203ENST00000593582 A0A1B0GVL5 298 aa16.48■□□□□ 0.23
TRIM28-203ENST00000593582 ZNF233A6NK53 670 aa16.48■□□□□ 0.23
TRIM28-203ENST00000593582 KPNA7A9QM74 516 aa16.48■□□□□ 0.23
TRIM28-203ENST00000593582 ACTN4O43707 911 aaKnown RBP16.48■□□□□ 0.23
TRIM28-203ENST00000593582 ITGB3P05106 788 aa16.48■□□□□ 0.23
TRIM28-203ENST00000593582 CYP11A1P05108 521 aa16.48■□□□□ 0.23
TRIM28-203ENST00000593582 OR4Q2P0C623 313 aa16.48■□□□□ 0.23
TRIM28-203ENST00000593582 PFKFB1P16118 471 aa16.48■□□□□ 0.23
TRIM28-203ENST00000593582 POLR2BP30876 1174 aaKnown RBP16.48■□□□□ 0.23
TRIM28-203ENST00000593582 WNT7BP56706 349 aa16.48■□□□□ 0.23
TRIM28-203ENST00000593582 TWF1Q12792 350 aa16.48■□□□□ 0.23
TRIM28-203ENST00000593582 SURF1Q15526 300 aa16.48■□□□□ 0.23
TRIM28-203ENST00000593582 HS2ST1Q7LGA3 356 aa16.48■□□□□ 0.23
TRIM28-203ENST00000593582 THEM5Q8N1Q8 247 aa16.48■□□□□ 0.23
TRIM28-203ENST00000593582 PGLYRP2Q96PD5 576 aa16.48■□□□□ 0.23
TRIM28-203ENST00000593582 PRRX2Q99811 253 aa16.48■□□□□ 0.23
TRIM28-203ENST00000593582 SCAND2PQ9GZW5 306 aaPredicted RBP16.48■□□□□ 0.23
TRIM28-203ENST00000593582 PDE11AQ9HCR9 933 aa16.48■□□□□ 0.23
TRIM28-203ENST00000593582 GDE1Q9NZC3 331 aa16.48■□□□□ 0.23
TRIM28-203ENST00000593582 HSPBP1Q9NZL4 362 aa16.48■□□□□ 0.23
TRIM28-203ENST00000593582 USP25Q9UHP3 1055 aa16.48■□□□□ 0.23
TRIM28-203ENST00000593582 ITGA11Q9UKX5 1188 aa16.48■□□□□ 0.23
TRIM28-203ENST00000593582 ZNF197O14709 1029 aa16.47■□□□□ 0.23
TRIM28-203ENST00000593582 NARSO43776 548 aaKnown RBP16.47■□□□□ 0.23
TRIM28-203ENST00000593582 TMEM191BP0C7N4 346 aa16.47■□□□□ 0.23
TRIM28-203ENST00000593582 SRFP11831 508 aa16.47■□□□□ 0.23
TRIM28-203ENST00000593582 AVPR2P30518 371 aa16.47■□□□□ 0.23
TRIM28-203ENST00000593582 SNRPFP62306 86 aaKnown RBP16.47■□□□□ 0.23
TRIM28-203ENST00000593582 DUSP4Q13115 394 aa16.47■□□□□ 0.23
TRIM28-203ENST00000593582 PLD1Q13393 1074 aa16.47■□□□□ 0.23
TRIM28-203ENST00000593582 CYP4A22Q5TCH4 519 aa16.47■□□□□ 0.23
TRIM28-203ENST00000593582 PARM1Q6UWI2 310 aa16.47■□□□□ 0.23
TRIM28-203ENST00000593582 PDZD4Q76G19 769 aaPredicted RBP16.47■□□□□ 0.23
TRIM28-203ENST00000593582 NPAS3Q8IXF0 933 aa16.47■□□□□ 0.23
TRIM28-203ENST00000593582 NELFCDQ8IXH7 590 aa16.47■□□□□ 0.23
TRIM28-203ENST00000593582 GRAMD1CQ8IYS0 662 aa16.47■□□□□ 0.23
TRIM28-203ENST00000593582 CSGALNACT2Q8N6G5 542 aa16.47■□□□□ 0.23
TRIM28-203ENST00000593582 C1orf127Q8N9H9 656 aa16.47■□□□□ 0.23
TRIM28-203ENST00000593582 SCFD1Q8WVM8 642 aa16.47■□□□□ 0.23
TRIM28-203ENST00000593582 ING5Q8WYH8 240 aa16.47■□□□□ 0.23
TRIM28-203ENST00000593582 PAGE5Q96GU1 130 aa16.47■□□□□ 0.23
TRIM28-203ENST00000593582 CHAMP1Q96JM3 812 aa16.47■□□□□ 0.23
TRIM28-203ENST00000593582 SLC39A2Q9NP94 309 aa16.47■□□□□ 0.23
TRIM28-203ENST00000593582 AGPAT3Q9NRZ7 376 aa16.47■□□□□ 0.23
TRIM28-203ENST00000593582 AGAP1Q9UPQ3 857 aa16.47■□□□□ 0.23
TRIM28-203ENST00000593582 R3HCC1Q9Y3T6 440 aaKnown RBP16.47■□□□□ 0.23
TRIM28-203ENST00000593582 TGFB1I1O43294 461 aa16.46■□□□□ 0.23
TRIM28-203ENST00000593582 CFHP08603 1231 aa16.46■□□□□ 0.23
TRIM28-203ENST00000593582 KRT19P08727 400 aa16.46■□□□□ 0.23
TRIM28-203ENST00000593582 ALDH1A3P47895 512 aa16.46■□□□□ 0.23
TRIM28-203ENST00000593582 VCPP55072 806 aaKnown RBP16.46■□□□□ 0.23
TRIM28-203ENST00000593582 RBP5P82980 135 aa16.46■□□□□ 0.23
TRIM28-203ENST00000593582 BMT2Q1RMZ1 405 aa16.46■□□□□ 0.23
TRIM28-203ENST00000593582 SLC5A9Q2M3M2 681 aa16.46■□□□□ 0.23
TRIM28-203ENST00000593582 WSCD1Q658N2 575 aa16.46■□□□□ 0.23
TRIM28-203ENST00000593582 CBWD2Q8IUF1 395 aa16.46■□□□□ 0.23
TRIM28-203ENST00000593582 SIX5Q8N196 739 aa16.46■□□□□ 0.23
TRIM28-203ENST00000593582 LRRC52Q8N7C0 313 aa16.46■□□□□ 0.23
TRIM28-203ENST00000593582 LEMD2Q8NC56 503 aa16.46■□□□□ 0.23
TRIM28-203ENST00000593582 ST13P5Q8NFI4 369 aaPredicted RBP16.46■□□□□ 0.23
TRIM28-203ENST00000593582 OR10T2Q8NGX3 314 aa16.46■□□□□ 0.23
TRIM28-203ENST00000593582 FGF14Q92915 247 aa16.46■□□□□ 0.23
TRIM28-203ENST00000593582 BORCS6Q96GS4 357 aa16.46■□□□□ 0.23
TRIM28-203ENST00000593582 ANKRD36BP1Q96IX9 119 aa16.46■□□□□ 0.23
TRIM28-203ENST00000593582 MTMR12Q9C0I1 747 aa16.46■□□□□ 0.23
TRIM28-203ENST00000593582 ASAH2Q9NR71 780 aa16.46■□□□□ 0.23
TRIM28-203ENST00000593582 EXOC1Q9NV70 894 aa16.46■□□□□ 0.23
TRIM28-203ENST00000593582 CGNQ9P2M7 1197 aaKnown RBP16.46■□□□□ 0.23
TRIM28-203ENST00000593582 WNT16Q9UBV4 365 aa16.46■□□□□ 0.23
TRIM28-203ENST00000593582 HPSEQ9Y251 543 aa16.46■□□□□ 0.23
TRIM28-203ENST00000593582 YIPF1Q9Y548 306 aa16.46■□□□□ 0.23
TRIM28-203ENST00000593582 ANK1P16157 1881 aa16.46■□□□□ 0.22
TRIM28-203ENST00000593582 MTMR11A4FU01 709 aa16.45■□□□□ 0.22
TRIM28-203ENST00000593582 MICAL2O94851 1124 aa16.45■□□□□ 0.22
TRIM28-203ENST00000593582 VNN2O95498 520 aa16.45■□□□□ 0.22
TRIM28-203ENST00000593582 TNNC2P02585 160 aa16.45■□□□□ 0.22
TRIM28-203ENST00000593582 MYL1P05976 194 aa16.45■□□□□ 0.22
TRIM28-203ENST00000593582 SYKP43405 635 aa16.45■□□□□ 0.22
TRIM28-203ENST00000593582 CYP2J2P51589 502 aa16.45■□□□□ 0.22
TRIM28-203ENST00000593582 EPHB3P54753 998 aa16.45■□□□□ 0.22
TRIM28-203ENST00000593582 SNRNP35Q16560 246 aaKnown RBP16.45■□□□□ 0.22
TRIM28-203ENST00000593582 KNOP1Q1ED39 458 aaKnown RBP16.45■□□□□ 0.22
TRIM28-203ENST00000593582 DUOXA2Q1HG44 320 aa16.45■□□□□ 0.22
TRIM28-203ENST00000593582 SLC39A12Q504Y0 691 aa16.45■□□□□ 0.22
TRIM28-203ENST00000593582 IER5LQ5T953 404 aa16.45■□□□□ 0.22
TRIM28-203ENST00000593582 ASTLQ6HA08 431 aaPredicted RBP16.45■□□□□ 0.22
TRIM28-203ENST00000593582 CENPPQ6IPU0 288 aa16.45■□□□□ 0.22
TRIM28-203ENST00000593582 ATAD1Q8NBU5 361 aa16.45■□□□□ 0.22
TRIM28-203ENST00000593582 MCRS1Q96EZ8 462 aa16.45■□□□□ 0.22
TRIM28-203ENST00000593582 TMEM209Q96SK2 561 aa16.45■□□□□ 0.22
TRIM28-203ENST00000593582 ZCWPW1Q9H0M4 648 aa16.45■□□□□ 0.22
TRIM28-203ENST00000593582 INTS13Q9NVM9 706 aa16.45■□□□□ 0.22
TRIM28-203ENST00000593582 CEP72Q9P209 647 aa16.45■□□□□ 0.22
TRIM28-203ENST00000593582 HSFX1Q9UBD0 423 aa16.45■□□□□ 0.22
TRIM28-203ENST00000593582 SLC27A5Q9Y2P5 690 aa16.45■□□□□ 0.22
TRIM28-203ENST00000593582 DOCK8Q8NF50 2099 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms