RNA–Protein interactions for RNA: ENST00000593160.2

CACNA1A-212, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,651 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-212ENST00000593160 TWNKQ96RR1 684 aa13.59□□□□□ -0.23
CACNA1A-212ENST00000593160 HMGXB4Q9UGU5 601 aa13.59□□□□□ -0.23
CACNA1A-212ENST00000593160 GTF3C4Q9UKN8 822 aa13.59□□□□□ -0.23
CACNA1A-212ENST00000593160 SNX12Q9UMY4 172 aa13.59□□□□□ -0.23
CACNA1A-212ENST00000593160 SAR1BQ9Y6B6 198 aa13.59□□□□□ -0.23
CACNA1A-212ENST00000593160 PIRO00625 290 aa13.59□□□□□ -0.23
CACNA1A-212ENST00000593160 XPOTO43592 962 aaKnown RBP13.59□□□□□ -0.23
CACNA1A-212ENST00000593160 MTA2O94776 668 aa13.59□□□□□ -0.23
CACNA1A-212ENST00000593160 FTCDO95954 541 aa13.59□□□□□ -0.23
CACNA1A-212ENST00000593160 ATF7P17544 494 aaPredicted RBP13.59□□□□□ -0.23
CACNA1A-212ENST00000593160 CYP3A5P20815 502 aa13.59□□□□□ -0.23
CACNA1A-212ENST00000593160 BRD2P25440 801 aaKnown RBP13.59□□□□□ -0.23
CACNA1A-212ENST00000593160 NOP2P46087 812 aaKnown RBP13.59□□□□□ -0.23
CACNA1A-212ENST00000593160 CDK7P50613 346 aa13.59□□□□□ -0.23
CACNA1A-212ENST00000593160 RAD23BP54727 409 aa13.59□□□□□ -0.23
CACNA1A-212ENST00000593160 TNNC1P63316 161 aa13.59□□□□□ -0.23
CACNA1A-212ENST00000593160 MBTPS1Q14703 1052 aa13.59□□□□□ -0.23
CACNA1A-212ENST00000593160 WHAMMP3Q1A5X7 153 aa13.59□□□□□ -0.23
CACNA1A-212ENST00000593160 MEI1Q5TIA1 1274 aa13.59□□□□□ -0.23
CACNA1A-212ENST00000593160 NAA35Q5VZE5 725 aa13.59□□□□□ -0.23
CACNA1A-212ENST00000593160 MON1BQ7L1V2 547 aa13.59□□□□□ -0.23
CACNA1A-212ENST00000593160 MRPL10Q7Z7H8 261 aaKnown RBP13.59□□□□□ -0.23
CACNA1A-212ENST00000593160 USP38Q8NB14 1042 aa13.59□□□□□ -0.23
CACNA1A-212ENST00000593160 GSTCDQ8NEC7 633 aa13.59□□□□□ -0.23
CACNA1A-212ENST00000593160 TFAP2BQ92481 460 aa13.59□□□□□ -0.23
CACNA1A-212ENST00000593160 CYFIP2Q96F07 1278 aa13.59□□□□□ -0.23
CACNA1A-212ENST00000593160 ZFP42Q96MM3 310 aa13.59□□□□□ -0.23
CACNA1A-212ENST00000593160 ELOVL4Q9GZR5 314 aa13.59□□□□□ -0.23
CACNA1A-212ENST00000593160 GOLPH3Q9H4A6 298 aa13.59□□□□□ -0.23
CACNA1A-212ENST00000593160 OGDHLQ9ULD0 1010 aa13.59□□□□□ -0.23
CACNA1A-212ENST00000593160 CEP350Q5VT06 3117 aa13.58□□□□□ -0.24
CACNA1A-212ENST00000593160 TLR3O15455 904 aaKnown RBP13.58□□□□□ -0.24
CACNA1A-212ENST00000593160 ATMINO43313 823 aaPredicted RBP13.58□□□□□ -0.24
CACNA1A-212ENST00000593160 SRGAP2O75044 1071 aa13.58□□□□□ -0.24
CACNA1A-212ENST00000593160 ZNF623O75123 536 aa13.58□□□□□ -0.24
CACNA1A-212ENST00000593160 TADA3O75528 432 aa13.58□□□□□ -0.24
CACNA1A-212ENST00000593160 CD4P01730 458 aa13.58□□□□□ -0.24
CACNA1A-212ENST00000593160 CYP1A2P05177 515 aa13.58□□□□□ -0.24
CACNA1A-212ENST00000593160 PAEPP09466 180 aa13.58□□□□□ -0.24
CACNA1A-212ENST00000593160 CCL5P13501 91 aa13.58□□□□□ -0.24
CACNA1A-212ENST00000593160 ITGA4P13612 1032 aa13.58□□□□□ -0.24
CACNA1A-212ENST00000593160 PRLRP16471 622 aa13.58□□□□□ -0.24
CACNA1A-212ENST00000593160 RAB27AP51159 221 aa13.58□□□□□ -0.24
CACNA1A-212ENST00000593160 MYO1EQ12965 1108 aa13.58□□□□□ -0.24
CACNA1A-212ENST00000593160 PASD1Q8IV76 773 aa13.58□□□□□ -0.24
CACNA1A-212ENST00000593160 FAM126BQ8IXS8 530 aa13.58□□□□□ -0.24
CACNA1A-212ENST00000593160 SLC4A11Q8NBS3 891 aa13.58□□□□□ -0.24
CACNA1A-212ENST00000593160 ZNF653Q96CK0 615 aa13.58□□□□□ -0.24
CACNA1A-212ENST00000593160 DEFB118Q96PH6 123 aa13.58□□□□□ -0.24
CACNA1A-212ENST00000593160 SEZ6LQ9BYH1 1024 aa13.58□□□□□ -0.24
CACNA1A-212ENST00000593160 GOLGA2P5Q9HBQ8 144 aa13.58□□□□□ -0.24
CACNA1A-212ENST00000593160 ABCB6Q9NP58 842 aa13.58□□□□□ -0.24
CACNA1A-212ENST00000593160 PCDHGC3Q9UN70 934 aa13.58□□□□□ -0.24
CACNA1A-212ENST00000593160 HYOU1Q9Y4L1 999 aa13.58□□□□□ -0.24
CACNA1A-212ENST00000593160 BUB1BO60566 1050 aaPredicted RBP13.57□□□□□ -0.24
CACNA1A-212ENST00000593160 ZSCAN20P17040 1043 aaPredicted RBP13.57□□□□□ -0.24
CACNA1A-212ENST00000593160 LRPAP1P30533 357 aa13.57□□□□□ -0.24
CACNA1A-212ENST00000593160 SSTR3P32745 418 aaPredicted RBP13.57□□□□□ -0.24
CACNA1A-212ENST00000593160 CDH5P33151 784 aaPredicted RBP13.57□□□□□ -0.24
CACNA1A-212ENST00000593160 MLH1P40692 756 aa13.57□□□□□ -0.24
CACNA1A-212ENST00000593160 PTP4A2Q12974 167 aa13.57□□□□□ -0.24
CACNA1A-212ENST00000593160 AGMOQ6ZNB7 445 aa13.57□□□□□ -0.24
CACNA1A-212ENST00000593160 PHF13Q86YI8 300 aaPredicted RBP13.57□□□□□ -0.24
CACNA1A-212ENST00000593160 HACE1Q8IYU2 909 aa13.57□□□□□ -0.24
CACNA1A-212ENST00000593160 MCOLN2Q8IZK6 566 aa13.57□□□□□ -0.24
CACNA1A-212ENST00000593160 CPA5Q8WXQ8 436 aa13.57□□□□□ -0.24
CACNA1A-212ENST00000593160 TSC1Q92574 1164 aa13.57□□□□□ -0.24
CACNA1A-212ENST00000593160 LPPQ93052 612 aa13.57□□□□□ -0.24
CACNA1A-212ENST00000593160 ZNF560Q96MR9 790 aa13.57□□□□□ -0.24
CACNA1A-212ENST00000593160 OSBPL9Q96SU4 736 aa13.57□□□□□ -0.24
CACNA1A-212ENST00000593160 AVENQ9NQS1 362 aaPredicted RBP13.57□□□□□ -0.24
CACNA1A-212ENST00000593160 PUF60Q9UHX1 559 aaKnown RBP13.57□□□□□ -0.24
CACNA1A-212ENST00000593160 BARX2Q9UMQ3 279 aaPredicted RBP13.57□□□□□ -0.24
CACNA1A-212ENST00000593160 STXBP5LQ9Y2K9 1186 aa13.57□□□□□ -0.24
CACNA1A-212ENST00000593160 TDRD15B5MCY1 1934 aaKnown RBP13.57□□□□□ -0.24
CACNA1A-212ENST00000593160 A0A0U1RQF3 1178 aa13.56□□□□□ -0.24
CACNA1A-212ENST00000593160 SPTLC1O15269 473 aa13.56□□□□□ -0.24
CACNA1A-212ENST00000593160 LSM8O95777 96 aaKnown RBP13.56□□□□□ -0.24
CACNA1A-212ENST00000593160 MYCP01106 439 aaPredicted RBP13.56□□□□□ -0.24
CACNA1A-212ENST00000593160 TCP1P17987 556 aaKnown RBP13.56□□□□□ -0.24
CACNA1A-212ENST00000593160 NSFP46459 744 aaKnown RBP13.56□□□□□ -0.24
CACNA1A-212ENST00000593160 AFF1P51825 1210 aaKnown RBP13.56□□□□□ -0.24
CACNA1A-212ENST00000593160 NDST1P52848 882 aa13.56□□□□□ -0.24
CACNA1A-212ENST00000593160 ORC1Q13415 861 aa13.56□□□□□ -0.24
CACNA1A-212ENST00000593160 NT5DC3Q86UY8 548 aa13.56□□□□□ -0.24
CACNA1A-212ENST00000593160 TTC39CQ8N584 583 aa13.56□□□□□ -0.24
CACNA1A-212ENST00000593160 MNS1Q8NEH6 495 aa13.56□□□□□ -0.24
CACNA1A-212ENST00000593160 CAGE1Q8TC20 777 aa13.56□□□□□ -0.24
CACNA1A-212ENST00000593160 TRIM11Q96F44 468 aa13.56□□□□□ -0.24
CACNA1A-212ENST00000593160 TMEM176AQ96HP8 235 aa13.56□□□□□ -0.24
CACNA1A-212ENST00000593160 CALR3Q96L12 384 aaKnown RBP13.56□□□□□ -0.24
CACNA1A-212ENST00000593160 GAD1Q99259 594 aa13.56□□□□□ -0.24
CACNA1A-212ENST00000593160 PDCL3Q9H2J4 239 aa13.56□□□□□ -0.24
CACNA1A-212ENST00000593160 CTTNBP2NLQ9P2B4 639 aa13.56□□□□□ -0.24
CACNA1A-212ENST00000593160 CNOT8Q9UFF9 292 aaKnown RBP13.56□□□□□ -0.24
CACNA1A-212ENST00000593160 PACSIN2Q9UNF0 486 aaPredicted RBP13.56□□□□□ -0.24
CACNA1A-212ENST00000593160 GIT1Q9Y2X7 761 aa13.56□□□□□ -0.24
CACNA1A-212ENST00000593160 NME7Q9Y5B8 376 aa13.56□□□□□ -0.24
CACNA1A-212ENST00000593160 SNX9Q9Y5X1 595 aa13.56□□□□□ -0.24
CACNA1A-212ENST00000593160 TSC2P49815 1807 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms