RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 CNOT6LQ96LI5 555 aaKnown RBP16.05■□□□□ 0.16
DDX39A-221ENST00000593026 CLSTN3Q9BQT9 956 aa16.05■□□□□ 0.16
DDX39A-221ENST00000593026 DNAJC25Q9H1X3 360 aa16.05■□□□□ 0.16
DDX39A-221ENST00000593026 THAP9Q9H5L6 903 aa16.05■□□□□ 0.16
DDX39A-221ENST00000593026 BACE2Q9Y5Z0 518 aa16.05■□□□□ 0.16
DDX39A-221ENST00000593026 HCFC2Q9Y5Z7 792 aa16.05■□□□□ 0.16
DDX39A-221ENST00000593026 TSC2P49815 1807 aa16.05■□□□□ 0.16
DDX39A-221ENST00000593026 HUS1O60921 280 aa16.04■□□□□ 0.16
DDX39A-221ENST00000593026 OAZ2O95190 189 aa16.04■□□□□ 0.16
DDX39A-221ENST00000593026 STAU1O95793 577 aaKnown RBP16.04■□□□□ 0.16
DDX39A-221ENST00000593026 HLA-DRAP01903 254 aa16.04■□□□□ 0.16
DDX39A-221ENST00000593026 CYP11A1P05108 521 aa16.04■□□□□ 0.16
DDX39A-221ENST00000593026 SRGAP2BP0DMP2 458 aa16.04■□□□□ 0.16
DDX39A-221ENST00000593026 TNNC1P63316 161 aa16.04■□□□□ 0.16
DDX39A-221ENST00000593026 MRPL58Q14197 206 aaKnown RBP16.04■□□□□ 0.16
DDX39A-221ENST00000593026 WSCD1Q658N2 575 aa16.04■□□□□ 0.16
DDX39A-221ENST00000593026 OVOS1Q6IE37 1185 aa16.04■□□□□ 0.16
DDX39A-221ENST00000593026 LLGL2Q6P1M3 1020 aa16.04■□□□□ 0.16
DDX39A-221ENST00000593026 CREBRFQ8IUR6 639 aa16.04■□□□□ 0.16
DDX39A-221ENST00000593026 FAM114A1Q8IWE2 563 aa16.04■□□□□ 0.16
DDX39A-221ENST00000593026 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.04■□□□□ 0.16
DDX39A-221ENST00000593026 ENOX1Q8TC92 643 aaKnown RBP16.04■□□□□ 0.16
DDX39A-221ENST00000593026 TAS1R2Q8TE23 839 aa16.04■□□□□ 0.16
DDX39A-221ENST00000593026 PABPC5Q96DU9 382 aaKnown RBP16.04■□□□□ 0.16
DDX39A-221ENST00000593026 IMPG2Q9BZV3 1241 aa16.04■□□□□ 0.16
DDX39A-221ENST00000593026 NAT10Q9H0A0 1025 aaKnown RBP16.04■□□□□ 0.16
DDX39A-221ENST00000593026 XYLT2Q9H1B5 865 aa16.04■□□□□ 0.16
DDX39A-221ENST00000593026 CLDND1Q9NY35 253 aa16.04■□□□□ 0.16
DDX39A-221ENST00000593026 NFE2L3Q9Y4A8 694 aa16.04■□□□□ 0.16
DDX39A-221ENST00000593026 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.04■□□□□ 0.16
DDX39A-221ENST00000593026 CDY1Q9Y6F8 540 aa16.04■□□□□ 0.16
DDX39A-221ENST00000593026 LINC01565O15544 149 aa16.03■□□□□ 0.16
DDX39A-221ENST00000593026 GLUD1P00367 558 aa16.03■□□□□ 0.16
DDX39A-221ENST00000593026 OR1D2P34982 312 aa16.03■□□□□ 0.16
DDX39A-221ENST00000593026 CLCN4P51793 760 aa16.03■□□□□ 0.16
DDX39A-221ENST00000593026 ADAM15Q13444 863 aa16.03■□□□□ 0.16
DDX39A-221ENST00000593026 COL19A1Q14993 1142 aa16.03■□□□□ 0.16
DDX39A-221ENST00000593026 CTC1Q2NKJ3 1217 aa16.03■□□□□ 0.16
DDX39A-221ENST00000593026 SGSM1Q2NKQ1 1148 aa16.03■□□□□ 0.16
DDX39A-221ENST00000593026 WDR72Q3MJ13 1102 aa16.03■□□□□ 0.16
DDX39A-221ENST00000593026 ANO6Q4KMQ2 910 aa16.03■□□□□ 0.16
DDX39A-221ENST00000593026 CBWD6Q4V339 395 aa16.03■□□□□ 0.16
DDX39A-221ENST00000593026 ZNF667Q5HYK9 610 aa16.03■□□□□ 0.16
DDX39A-221ENST00000593026 CBWD3Q5JTY5 395 aa16.03■□□□□ 0.16
DDX39A-221ENST00000593026 CBWD5Q5RIA9 395 aa16.03■□□□□ 0.16
DDX39A-221ENST00000593026 SLC8B1Q6J4K2 584 aa16.03■□□□□ 0.16
DDX39A-221ENST00000593026 PALB2Q86YC2 1186 aa16.03■□□□□ 0.16
DDX39A-221ENST00000593026 TMEM86AQ8N2M4 240 aa16.03■□□□□ 0.16
DDX39A-221ENST00000593026 PDCL2Q8N4E4 241 aa16.03■□□□□ 0.16
DDX39A-221ENST00000593026 TOP6BLQ8N6T0 577 aa16.03■□□□□ 0.16
DDX39A-221ENST00000593026 FBXL13Q8NEE6 735 aa16.03■□□□□ 0.16
DDX39A-221ENST00000593026 TAF4BQ92750 862 aa16.03■□□□□ 0.16
DDX39A-221ENST00000593026 MMS19Q96T76 1030 aa16.03■□□□□ 0.16
DDX39A-221ENST00000593026 OXCT2Q9BYC2 517 aaPredicted RBP16.03■□□□□ 0.16
DDX39A-221ENST00000593026 VRTNQ9H8Y1 702 aa16.03■□□□□ 0.16
DDX39A-221ENST00000593026 MAGEC2Q9UBF1 373 aaPredicted RBP16.03■□□□□ 0.16
DDX39A-221ENST00000593026 NXF1Q9UBU9 619 aaKnown RBP16.03■□□□□ 0.16
DDX39A-221ENST00000593026 FBXL5Q9UKA1 691 aa16.03■□□□□ 0.16
DDX39A-221ENST00000593026 L1RE1Q9UN81 338 aa16.03■□□□□ 0.16
DDX39A-221ENST00000593026 OR6C75A6NL08 312 aa16.02■□□□□ 0.16
DDX39A-221ENST00000593026 ADAM12O43184 909 aa16.02■□□□□ 0.16
DDX39A-221ENST00000593026 TBC1D4O60343 1298 aa16.02■□□□□ 0.16
DDX39A-221ENST00000593026 N4BP1O75113 896 aaKnown RBP16.02■□□□□ 0.16
DDX39A-221ENST00000593026 GLP2RO95838 553 aa16.02■□□□□ 0.16
DDX39A-221ENST00000593026 ASS1P00966 412 aaKnown RBP16.02■□□□□ 0.16
DDX39A-221ENST00000593026 EPCAMP16422 314 aa16.02■□□□□ 0.16
DDX39A-221ENST00000593026 MTIF2P46199 727 aaKnown RBP16.02■□□□□ 0.16
DDX39A-221ENST00000593026 FMO5P49326 533 aa16.02■□□□□ 0.16
DDX39A-221ENST00000593026 RBM10P98175 930 aaKnown RBP16.02■□□□□ 0.16
DDX39A-221ENST00000593026 MYL7Q01449 175 aa16.02■□□□□ 0.16
DDX39A-221ENST00000593026 MYL5Q02045 173 aa16.02■□□□□ 0.16
DDX39A-221ENST00000593026 KCNC3Q14003 757 aa16.02■□□□□ 0.16
DDX39A-221ENST00000593026 SOWAHAQ2M3V2 549 aa16.02■□□□□ 0.16
DDX39A-221ENST00000593026 ZSCAN23Q3MJ62 389 aa16.02■□□□□ 0.16
DDX39A-221ENST00000593026 HSP90AA4PQ58FG1 418 aa16.02■□□□□ 0.16
DDX39A-221ENST00000593026 RSPO2Q6UXX9 243 aaPredicted RBP16.02■□□□□ 0.16
DDX39A-221ENST00000593026 DPH6Q7L8W6 267 aa16.02■□□□□ 0.16
DDX39A-221ENST00000593026 IRF2BP1Q8IU81 584 aa16.02■□□□□ 0.16
DDX39A-221ENST00000593026 ADGRF2Q8IZF7 708 aa16.02■□□□□ 0.16
DDX39A-221ENST00000593026 THEM5Q8N1Q8 247 aa16.02■□□□□ 0.16
DDX39A-221ENST00000593026 CCDC150Q8NCX0 1101 aa16.02■□□□□ 0.16
DDX39A-221ENST00000593026 VN1R2Q8NFZ6 395 aa16.02■□□□□ 0.16
DDX39A-221ENST00000593026 SLC22A17Q8WUG5 538 aa16.02■□□□□ 0.16
DDX39A-221ENST00000593026 CASP10Q92851 521 aa16.02■□□□□ 0.16
DDX39A-221ENST00000593026 UBE2ZQ9H832 354 aaPredicted RBP16.02■□□□□ 0.16
DDX39A-221ENST00000593026 COL6A3P12111 3177 aa16.01■□□□□ 0.15
DDX39A-221ENST00000593026 TGM5O43548 720 aa16.01■□□□□ 0.15
DDX39A-221ENST00000593026 C1RP00736 705 aa16.01■□□□□ 0.15
DDX39A-221ENST00000593026 P4HA1P13674 534 aa16.01■□□□□ 0.15
DDX39A-221ENST00000593026 CPB1P15086 417 aa16.01■□□□□ 0.15
DDX39A-221ENST00000593026 ARPP19P56211 112 aa16.01■□□□□ 0.15
DDX39A-221ENST00000593026 NOP14P78316 857 aaKnown RBP16.01■□□□□ 0.15
DDX39A-221ENST00000593026 ROR1Q01973 937 aa16.01■□□□□ 0.15
DDX39A-221ENST00000593026 KCNH2Q12809 1159 aa16.01■□□□□ 0.15
DDX39A-221ENST00000593026 RAB33AQ14088 237 aa16.01■□□□□ 0.15
DDX39A-221ENST00000593026 LIMS2Q7Z4I7 341 aa16.01■□□□□ 0.15
DDX39A-221ENST00000593026 SPATA18Q8TC71 538 aa16.01■□□□□ 0.15
DDX39A-221ENST00000593026 HLA-CQ95604 372 aa16.01■□□□□ 0.15
DDX39A-221ENST00000593026 ELMO3Q96BJ8 720 aa16.01■□□□□ 0.15
DDX39A-221ENST00000593026 PI4K2AQ9BTU6 479 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms