RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	TTC9B	Q8N6N2	239 aa		19.91	■□□□□ 0.78
CIRBP-238	ENST00000592412	TMEM209	Q96SK2	561 aa		19.91	■□□□□ 0.78
CIRBP-238	ENST00000592412	TIPIN	Q9BVW5	301 aa		19.91	■□□□□ 0.78
CIRBP-238	ENST00000592412	RAB34	Q9BZG1	259 aa		19.91	■□□□□ 0.78
CIRBP-238	ENST00000592412	GPR88	Q9GZN0	384 aa		19.91	■□□□□ 0.78
CIRBP-238	ENST00000592412	CEP295	Q9C0D2	2601 aa		19.91	■□□□□ 0.78
CIRBP-238	ENST00000592412	TSC2	P49815	1807 aa		19.9	■□□□□ 0.78
CIRBP-238	ENST00000592412	MYBPHL	A2RUH7	354 aa		19.9	■□□□□ 0.78
CIRBP-238	ENST00000592412	MTMR11	A4FU01	709 aa		19.9	■□□□□ 0.78
CIRBP-238	ENST00000592412	CLDN3	O15551	220 aa		19.9	■□□□□ 0.78
CIRBP-238	ENST00000592412	MARCKS	P29966	332 aa	Predicted RBP	19.9	■□□□□ 0.78
CIRBP-238	ENST00000592412	PRPH	P41219	470 aa		19.9	■□□□□ 0.78
CIRBP-238	ENST00000592412	HMGN5	P82970	282 aa	Known RBP	19.9	■□□□□ 0.78
CIRBP-238	ENST00000592412	STRN3	Q13033	797 aa		19.9	■□□□□ 0.78
CIRBP-238	ENST00000592412	CENPP	Q6IPU0	288 aa		19.9	■□□□□ 0.78
CIRBP-238	ENST00000592412	ARID3B	Q8IVW6	561 aa	Predicted RBP	19.9	■□□□□ 0.78
CIRBP-238	ENST00000592412	E2F7	Q96AV8	911 aa		19.9	■□□□□ 0.78
CIRBP-238	ENST00000592412	KIF12	Q96FN5	646 aa		19.9	■□□□□ 0.78
CIRBP-238	ENST00000592412	ZFYVE19	Q96K21	471 aa		19.9	■□□□□ 0.78
CIRBP-238	ENST00000592412	PLEKHA5	Q9HAU0	1116 aa		19.9	■□□□□ 0.78
CIRBP-238	ENST00000592412	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	19.9	■□□□□ 0.78
CIRBP-238	ENST00000592412	RAB23	Q9ULC3	237 aa		19.9	■□□□□ 0.78
CIRBP-238	ENST00000592412	SLC27A5	Q9Y2P5	690 aa		19.9	■□□□□ 0.78
CIRBP-238	ENST00000592412	FRY	Q5TBA9	3013 aa		19.9	■□□□□ 0.78
CIRBP-238	ENST00000592412	NUP210	Q8TEM1	1887 aa	Predicted RBP	19.9	■□□□□ 0.78
CIRBP-238	ENST00000592412	NPHP3-ACAD11	A0A0J9YXS1	232 aa		19.89	■□□□□ 0.77
CIRBP-238	ENST00000592412	SPECC1L-ADORA2A	F8WAN1	911 aa		19.89	■□□□□ 0.77
CIRBP-238	ENST00000592412	LAD1	O00515	517 aa		19.89	■□□□□ 0.77
CIRBP-238	ENST00000592412	SLC30A4	O14863	429 aa		19.89	■□□□□ 0.77
CIRBP-238	ENST00000592412	LRP3	O75074	770 aa		19.89	■□□□□ 0.77
CIRBP-238	ENST00000592412	SOAT2	O75908	522 aa		19.89	■□□□□ 0.77
CIRBP-238	ENST00000592412	ADRB1	P08588	477 aa		19.89	■□□□□ 0.77
CIRBP-238	ENST00000592412	CLTA	P09496	248 aa		19.89	■□□□□ 0.77
CIRBP-238	ENST00000592412	CYP3A5	P20815	502 aa		19.89	■□□□□ 0.77
CIRBP-238	ENST00000592412	MYH11	P35749	1972 aa		19.89	■□□□□ 0.77
CIRBP-238	ENST00000592412	SLC12A3	P55017	1021 aa		19.89	■□□□□ 0.77
CIRBP-238	ENST00000592412	CACNB1	Q02641	598 aa	Predicted RBP	19.89	■□□□□ 0.77
CIRBP-238	ENST00000592412	SIM2	Q14190	667 aa	Predicted RBP	19.89	■□□□□ 0.77
CIRBP-238	ENST00000592412	SYT2	Q8N9I0	419 aa	Predicted RBP	19.89	■□□□□ 0.77
CIRBP-238	ENST00000592412	ATAD1	Q8NBU5	361 aa		19.89	■□□□□ 0.77
CIRBP-238	ENST00000592412	TTC8	Q8TAM2	541 aa		19.89	■□□□□ 0.77
CIRBP-238	ENST00000592412	CSGALNACT1	Q8TDX6	532 aa		19.89	■□□□□ 0.77
CIRBP-238	ENST00000592412	MSANTD3	Q96H12	275 aa		19.89	■□□□□ 0.77
CIRBP-238	ENST00000592412	SEMA4G	Q9NTN9	838 aa		19.89	■□□□□ 0.77
CIRBP-238	ENST00000592412	GTSE1	Q9NYZ3	720 aa		19.89	■□□□□ 0.77
CIRBP-238	ENST00000592412	UBQLN1	Q9UMX0	589 aa	Known RBP	19.89	■□□□□ 0.77
CIRBP-238	ENST00000592412	OR6C75	A6NL08	312 aa		19.88	■□□□□ 0.77
CIRBP-238	ENST00000592412	LACTBL1	A8MY62	500 aa		19.88	■□□□□ 0.77
CIRBP-238	ENST00000592412	GDF9	O60383	454 aa		19.88	■□□□□ 0.77
CIRBP-238	ENST00000592412	PRAMEF12	O95522	483 aa		19.88	■□□□□ 0.77
CIRBP-238	ENST00000592412	CTH	P32929	405 aa		19.88	■□□□□ 0.77
CIRBP-238	ENST00000592412	NCKAP1L	P55160	1127 aa		19.88	■□□□□ 0.77
CIRBP-238	ENST00000592412	PLD1	Q13393	1074 aa		19.88	■□□□□ 0.77
CIRBP-238	ENST00000592412	ENOX2	Q16206	610 aa	Known RBP	19.88	■□□□□ 0.77
CIRBP-238	ENST00000592412	ARSH	Q5FYA8	562 aa		19.88	■□□□□ 0.77
CIRBP-238	ENST00000592412	DTHD1	Q6ZMT9	781 aa		19.88	■□□□□ 0.77
CIRBP-238	ENST00000592412	FAM184A	Q8NB25	1140 aa		19.88	■□□□□ 0.77
CIRBP-238	ENST00000592412	NETO1	Q8TDF5	533 aa		19.88	■□□□□ 0.77
CIRBP-238	ENST00000592412	KCNN1	Q92952	543 aa		19.88	■□□□□ 0.77
CIRBP-238	ENST00000592412	PSMG2	Q969U7	264 aa		19.88	■□□□□ 0.77
CIRBP-238	ENST00000592412	PLIN2	Q99541	437 aa		19.88	■□□□□ 0.77
CIRBP-238	ENST00000592412	OXCT2	Q9BYC2	517 aa	Predicted RBP	19.88	■□□□□ 0.77
CIRBP-238	ENST00000592412	C8orf33	Q9H7E9	229 aa	Predicted RBP	19.88	■□□□□ 0.77
CIRBP-238	ENST00000592412	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	19.87	■□□□□ 0.77
CIRBP-238	ENST00000592412	ADRB2	P07550	413 aa		19.87	■□□□□ 0.77
CIRBP-238	ENST00000592412	TYMP	P19971	482 aa		19.87	■□□□□ 0.77
CIRBP-238	ENST00000592412	KPNA1	P52294	538 aa	Predicted RBP	19.87	■□□□□ 0.77
CIRBP-238	ENST00000592412	EPHB3	P54753	998 aa		19.87	■□□□□ 0.77
CIRBP-238	ENST00000592412	CCIN	Q13939	588 aa		19.87	■□□□□ 0.77
CIRBP-238	ENST00000592412	LRRC32	Q14392	662 aa		19.87	■□□□□ 0.77
CIRBP-238	ENST00000592412	ZRSR1	Q15695	479 aa	Known RBP	19.87	■□□□□ 0.77
CIRBP-238	ENST00000592412	OVOS1	Q6IE37	1185 aa		19.87	■□□□□ 0.77
CIRBP-238	ENST00000592412	PRR23C	Q6ZRP0	262 aa		19.87	■□□□□ 0.77
CIRBP-238	ENST00000592412	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	19.87	■□□□□ 0.77
CIRBP-238	ENST00000592412	LONP2	Q86WA8	852 aa		19.87	■□□□□ 0.77
CIRBP-238	ENST00000592412	YAF2	Q8IY57	180 aa		19.87	■□□□□ 0.77
CIRBP-238	ENST00000592412	LRRC15	Q8TF66	581 aa		19.87	■□□□□ 0.77
CIRBP-238	ENST00000592412	KIF26A	Q9ULI4	1882 aa	Predicted RBP	19.87	■□□□□ 0.77
CIRBP-238	ENST00000592412	CNOT1	A5YKK6	2376 aa	Known RBP	19.87	■□□□□ 0.77
CIRBP-238	ENST00000592412	SMTN	P53814	917 aa		19.86	■□□□□ 0.77
CIRBP-238	ENST00000592412	PPP2R3A	Q06190	1150 aa		19.86	■□□□□ 0.77
CIRBP-238	ENST00000592412	TNK2	Q07912	1038 aa		19.86	■□□□□ 0.77
CIRBP-238	ENST00000592412	MYBPC2	Q14324	1141 aa		19.86	■□□□□ 0.77
CIRBP-238	ENST00000592412	CSRP2	Q16527	193 aa		19.86	■□□□□ 0.77
CIRBP-238	ENST00000592412	HEATR6	Q6AI08	1181 aa	Known RBP	19.86	■□□□□ 0.77
CIRBP-238	ENST00000592412	C1orf228	Q6PIY5	440 aa		19.86	■□□□□ 0.77
CIRBP-238	ENST00000592412	DSTYK	Q6XUX3	929 aa		19.86	■□□□□ 0.77
CIRBP-238	ENST00000592412	USP37	Q86T82	979 aa		19.86	■□□□□ 0.77
CIRBP-238	ENST00000592412	RALGPS2	Q86X27	583 aa	Predicted RBP	19.86	■□□□□ 0.77
CIRBP-238	ENST00000592412	OR10T2	Q8NGX3	314 aa		19.86	■□□□□ 0.77
CIRBP-238	ENST00000592412	KIF2C	Q99661	725 aa		19.86	■□□□□ 0.77
CIRBP-238	ENST00000592412	IL21	Q9HBE4	155 aa		19.86	■□□□□ 0.77
CIRBP-238	ENST00000592412	ANK1	P16157	1881 aa		19.86	■□□□□ 0.77
CIRBP-238	ENST00000592412	CENPB	P07199	599 aa	Predicted RBP	19.85	■□□□□ 0.77
CIRBP-238	ENST00000592412	PLA2G4B	P0C869	781 aa		19.85	■□□□□ 0.77
CIRBP-238	ENST00000592412	GABRR2	P28476	465 aa		19.85	■□□□□ 0.77
CIRBP-238	ENST00000592412	CNR2	P34972	360 aa		19.85	■□□□□ 0.77
CIRBP-238	ENST00000592412	MATR3	P43243	847 aa	Known RBP eCLIP	19.85	■□□□□ 0.77
CIRBP-238	ENST00000592412	ALDH1A3	P47895	512 aa		19.85	■□□□□ 0.77
CIRBP-238	ENST00000592412	CDR1	P51861	262 aa		19.85	■□□□□ 0.77

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