RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 ART4Q93070 314 aa16.74■□□□□ 0.27
MBD1-227ENST00000592060 SLC10A4Q96EP9 437 aa16.74■□□□□ 0.27
MBD1-227ENST00000592060 ANKRD36BP1Q96IX9 119 aa16.74■□□□□ 0.27
MBD1-227ENST00000592060 FAM129AQ9BZQ8 928 aa16.74■□□□□ 0.27
MBD1-227ENST00000592060 DCLK3Q9C098 648 aa16.74■□□□□ 0.27
MBD1-227ENST00000592060 LRRC4CQ9HCJ2 640 aa16.74■□□□□ 0.27
MBD1-227ENST00000592060 CHST7Q9NS84 486 aa16.74■□□□□ 0.27
MBD1-227ENST00000592060 PARVAQ9NVD7 372 aa16.74■□□□□ 0.27
MBD1-227ENST00000592060 PCDHGC3Q9UN70 934 aa16.74■□□□□ 0.27
MBD1-227ENST00000592060 PTPN22Q9Y2R2 807 aa16.74■□□□□ 0.27
MBD1-227ENST00000592060 GPR25O00155 361 aa16.73■□□□□ 0.27
MBD1-227ENST00000592060 TLR3O15455 904 aaKnown RBP16.73■□□□□ 0.27
MBD1-227ENST00000592060 NUDT17P0C025 328 aa16.73■□□□□ 0.27
MBD1-227ENST00000592060 CXCL8P10145 99 aa16.73■□□□□ 0.27
MBD1-227ENST00000592060 PHKA2P46019 1235 aa16.73■□□□□ 0.27
MBD1-227ENST00000592060 PMS2P54278 862 aa16.73■□□□□ 0.27
MBD1-227ENST00000592060 OSTNP61366 133 aa16.73■□□□□ 0.27
MBD1-227ENST00000592060 CCNA1P78396 465 aa16.73■□□□□ 0.27
MBD1-227ENST00000592060 PDCLQ13371 301 aa16.73■□□□□ 0.27
MBD1-227ENST00000592060 LLGL1Q15334 1064 aa16.73■□□□□ 0.27
MBD1-227ENST00000592060 EAPPQ56P03 285 aaPredicted RBP16.73■□□□□ 0.27
MBD1-227ENST00000592060 SCARA5Q6ZMJ2 495 aa16.73■□□□□ 0.27
MBD1-227ENST00000592060 PPTC7Q8NI37 304 aa16.73■□□□□ 0.27
MBD1-227ENST00000592060 TFAP2BQ92481 460 aa16.73■□□□□ 0.27
MBD1-227ENST00000592060 EMID1Q96A84 441 aaPredicted RBP16.73■□□□□ 0.27
MBD1-227ENST00000592060 PABPC3Q9H361 631 aaKnown RBP16.73■□□□□ 0.27
MBD1-227ENST00000592060 SIX4Q9UIU6 781 aa16.73■□□□□ 0.27
MBD1-227ENST00000592060 SLC45A1Q9Y2W3 748 aa16.73■□□□□ 0.27
MBD1-227ENST00000592060 COL1A2P08123 1366 aa16.73■□□□□ 0.27
MBD1-227ENST00000592060 CALB1P05937 261 aa16.73■□□□□ 0.27
MBD1-227ENST00000592060 WEE2P0C1S8 567 aa16.73■□□□□ 0.27
MBD1-227ENST00000592060 EIF3BP55884 814 aaKnown RBP16.73■□□□□ 0.27
MBD1-227ENST00000592060 IGBP1P78318 339 aa16.73■□□□□ 0.27
MBD1-227ENST00000592060 ZNF252P-AS1Q0IIN9 211 aa16.73■□□□□ 0.27
MBD1-227ENST00000592060 TTC19Q6DKK2 380 aaPredicted RBP16.73■□□□□ 0.27
MBD1-227ENST00000592060 MS4A4AQ96JQ5 239 aa16.73■□□□□ 0.27
MBD1-227ENST00000592060 RPF1Q9H9Y2 349 aaKnown RBP16.73■□□□□ 0.27
MBD1-227ENST00000592060 POLIQ9UNA4 740 aa16.73■□□□□ 0.27
MBD1-227ENST00000592060 TMEM191CA6NGB0 347 aa16.72■□□□□ 0.27
MBD1-227ENST00000592060 PDHXO00330 501 aa16.72■□□□□ 0.27
MBD1-227ENST00000592060 NFICP08651 508 aa16.72■□□□□ 0.27
MBD1-227ENST00000592060 RPL7AP62424 266 aaKnown RBP16.72■□□□□ 0.27
MBD1-227ENST00000592060 KRT17Q04695 432 aa16.72■□□□□ 0.27
MBD1-227ENST00000592060 TMEM132AQ24JP5 1023 aa16.72■□□□□ 0.27
MBD1-227ENST00000592060 ZNF394Q53GI3 561 aa16.72■□□□□ 0.27
MBD1-227ENST00000592060 PPP1R15BQ5SWA1 713 aa16.72■□□□□ 0.27
MBD1-227ENST00000592060 ZNF467Q7Z7K2 595 aaPredicted RBP16.72■□□□□ 0.27
MBD1-227ENST00000592060 WDTC1Q8N5D0 677 aa16.72■□□□□ 0.27
MBD1-227ENST00000592060 TMEM35BQ8NCS4 154 aa16.72■□□□□ 0.27
MBD1-227ENST00000592060 ATG4AQ8WYN0 398 aa16.72■□□□□ 0.27
MBD1-227ENST00000592060 RNF25Q96BH1 459 aaPredicted RBP16.72■□□□□ 0.27
MBD1-227ENST00000592060 BCO2Q9BYV7 579 aa16.72■□□□□ 0.27
MBD1-227ENST00000592060 ZNF518BQ9C0D4 1074 aa16.72■□□□□ 0.27
MBD1-227ENST00000592060 MTRF1LQ9UGC7 380 aaKnown RBP16.72■□□□□ 0.27
MBD1-227ENST00000592060 IP6K2Q9UHH9 426 aa16.72■□□□□ 0.27
MBD1-227ENST00000592060 R3HDM2Q9Y2K5 976 aaKnown RBP16.72■□□□□ 0.27
MBD1-227ENST00000592060 A0A087WZ62 844 aa16.71■□□□□ 0.27
MBD1-227ENST00000592060 GLTPD2A6NH11 291 aa16.71■□□□□ 0.27
MBD1-227ENST00000592060 UNCXA6NJT0 531 aa16.71■□□□□ 0.27
MBD1-227ENST00000592060 BTBD19C9JJ37 291 aa16.71■□□□□ 0.27
MBD1-227ENST00000592060 TP73O15350 636 aa16.71■□□□□ 0.27
MBD1-227ENST00000592060 MAGEB2O15479 319 aa16.71■□□□□ 0.27
MBD1-227ENST00000592060 MCF2P10911 925 aa16.71■□□□□ 0.27
MBD1-227ENST00000592060 RALAP11233 206 aa16.71■□□□□ 0.27
MBD1-227ENST00000592060 YWHAEP62258 255 aaKnown RBP16.71■□□□□ 0.27
MBD1-227ENST00000592060 PTK6Q13882 451 aa16.71■□□□□ 0.27
MBD1-227ENST00000592060 SYDE1Q6ZW31 735 aaPredicted RBP16.71■□□□□ 0.27
MBD1-227ENST00000592060 ANKS1BQ7Z6G8 1248 aa16.71■□□□□ 0.27
MBD1-227ENST00000592060 C1orf127Q8N9H9 656 aa16.71■□□□□ 0.27
MBD1-227ENST00000592060 EXD1Q8NHP7 514 aa16.71■□□□□ 0.27
MBD1-227ENST00000592060 CXorf38Q8TB03 319 aa16.71■□□□□ 0.27
MBD1-227ENST00000592060 AFG1LQ8WV93 481 aa16.71■□□□□ 0.27
MBD1-227ENST00000592060 PKNOX2Q96KN3 472 aa16.71■□□□□ 0.27
MBD1-227ENST00000592060 FDXACB1Q9BRP7 624 aaPredicted RBP16.71■□□□□ 0.27
MBD1-227ENST00000592060 PDZD7Q9H5P4 517 aa16.71■□□□□ 0.27
MBD1-227ENST00000592060 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.71■□□□□ 0.27
MBD1-227ENST00000592060 WHRNQ9P202 907 aa16.71■□□□□ 0.27
MBD1-227ENST00000592060 MORF4L1Q9UBU8 362 aa16.71■□□□□ 0.27
MBD1-227ENST00000592060 DCAF8L1A6NGE4 600 aa16.71■□□□□ 0.27
MBD1-227ENST00000592060 SHBGP04278 402 aa16.71■□□□□ 0.27
MBD1-227ENST00000592060 ZNF286BP0CG31 522 aa16.71■□□□□ 0.27
MBD1-227ENST00000592060 EIF4BP23588 611 aaKnown RBP16.71■□□□□ 0.27
MBD1-227ENST00000592060 SNX1Q13596 522 aa16.71■□□□□ 0.27
MBD1-227ENST00000592060 PPP1R7Q15435 360 aa16.71■□□□□ 0.27
MBD1-227ENST00000592060 KRT71Q3SY84 523 aa16.71■□□□□ 0.27
MBD1-227ENST00000592060 RHBDF2Q6PJF5 856 aa16.71■□□□□ 0.27
MBD1-227ENST00000592060 ZNF784Q8NCA9 323 aaPredicted RBP16.71■□□□□ 0.27
MBD1-227ENST00000592060 C16orf70Q9BSU1 422 aa16.71■□□□□ 0.27
MBD1-227ENST00000592060 CENPHQ9H3R5 247 aa16.71■□□□□ 0.27
MBD1-227ENST00000592060 USTQ9Y2C2 406 aa16.71■□□□□ 0.27
MBD1-227ENST00000592060 LACTBL1A8MY62 500 aa16.7■□□□□ 0.26
MBD1-227ENST00000592060 STAG3L1P0CL83 205 aa16.7■□□□□ 0.26
MBD1-227ENST00000592060 CETPP11597 493 aa16.7■□□□□ 0.26
MBD1-227ENST00000592060 ADCYAP1R1P41586 468 aa16.7■□□□□ 0.26
MBD1-227ENST00000592060 OGDHQ02218 1023 aa16.7■□□□□ 0.26
MBD1-227ENST00000592060 TNFAIP2Q03169 654 aa16.7■□□□□ 0.26
MBD1-227ENST00000592060 UBAP2Q5T6F2 1119 aaKnown RBP16.7■□□□□ 0.26
MBD1-227ENST00000592060 DNAJC24Q6P3W2 148 aa16.7■□□□□ 0.26
MBD1-227ENST00000592060 CCDC50Q8IVM0 306 aa16.7■□□□□ 0.26
MBD1-227ENST00000592060 TMEM130Q8N3G9 435 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms