RNA–Protein interactions for RNA: ENST00000591901.5

PTPN2-213, Transcript of protein tyrosine phosphatase, non-receptor type 2, human

TSL 2

Gene PTPN2, Length 743 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN2-213	ENST00000591901	FXR1	P51114	621 aa	Known RBP eCLIP	4.88	□□□□□ -1.63
PTPN2-213	ENST00000591901	GTF2H3	Q13889	308 aa		4.88	□□□□□ -1.63
PTPN2-213	ENST00000591901	FOXR2	Q6PJQ5	311 aa		4.88	□□□□□ -1.63
PTPN2-213	ENST00000591901	SLC4A10	Q6U841	1118 aa		4.88	□□□□□ -1.63
PTPN2-213	ENST00000591901		Q6ZNX1	250 aa		4.88	□□□□□ -1.63
PTPN2-213	ENST00000591901	NOL8	Q76FK4	1167 aa	Known RBP	4.88	□□□□□ -1.63
PTPN2-213	ENST00000591901	TTC7B	Q86TV6	843 aa		4.88	□□□□□ -1.63
PTPN2-213	ENST00000591901		Q8NA96	180 aa		4.88	□□□□□ -1.63
PTPN2-213	ENST00000591901	TBC1D15	Q8TC07	691 aa		4.88	□□□□□ -1.63
PTPN2-213	ENST00000591901	SLC9A6	Q92581	669 aa		4.88	□□□□□ -1.63
PTPN2-213	ENST00000591901	RGMA	Q96B86	450 aa		4.88	□□□□□ -1.63
PTPN2-213	ENST00000591901	MRGPRX4	Q96LA9	322 aa		4.88	□□□□□ -1.63
PTPN2-213	ENST00000591901	AIFM3	Q96NN9	605 aa		4.88	□□□□□ -1.63
PTPN2-213	ENST00000591901	MED15	Q96RN5	788 aa		4.88	□□□□□ -1.63
PTPN2-213	ENST00000591901	KMT5A	Q9NQR1	393 aa		4.88	□□□□□ -1.63
PTPN2-213	ENST00000591901	ANLN	Q9NQW6	1124 aa		4.88	□□□□□ -1.63
PTPN2-213	ENST00000591901	TBCCD1	Q9NVR7	557 aa		4.88	□□□□□ -1.63
PTPN2-213	ENST00000591901	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	4.88	□□□□□ -1.63
PTPN2-213	ENST00000591901	MTO1	Q9Y2Z2	717 aa	Known RBP	4.88	□□□□□ -1.63
PTPN2-213	ENST00000591901	GRM6	O15303	877 aa		4.87	□□□□□ -1.63
PTPN2-213	ENST00000591901	CTNND1	O60716	968 aa	Known RBP	4.87	□□□□□ -1.63
PTPN2-213	ENST00000591901	LPO	P22079	712 aa	Predicted RBP	4.87	□□□□□ -1.63
PTPN2-213	ENST00000591901	SMARCA1	P28370	1054 aa		4.87	□□□□□ -1.63
PTPN2-213	ENST00000591901	PLA2G5	P39877	138 aa		4.87	□□□□□ -1.63
PTPN2-213	ENST00000591901	GEN1	Q17RS7	908 aa		4.87	□□□□□ -1.63
PTPN2-213	ENST00000591901	PABPC1L	Q4VXU2	614 aa	Known RBP	4.87	□□□□□ -1.63
PTPN2-213	ENST00000591901	THEMIS2	Q5TEJ8	643 aa		4.87	□□□□□ -1.63
PTPN2-213	ENST00000591901	NXN	Q6DKJ4	435 aa		4.87	□□□□□ -1.63
PTPN2-213	ENST00000591901	EPM2AIP1	Q7L775	607 aa	Predicted RBP	4.87	□□□□□ -1.63
PTPN2-213	ENST00000591901	ADGRG3	Q86Y34	549 aa		4.87	□□□□□ -1.63
PTPN2-213	ENST00000591901	CCAR1	Q8IX12	1150 aa	Known RBP	4.87	□□□□□ -1.63
PTPN2-213	ENST00000591901	SH2D3C	Q8N5H7	860 aa		4.87	□□□□□ -1.63
PTPN2-213	ENST00000591901	SIMC1	Q8NDZ2	872 aa		4.87	□□□□□ -1.63
PTPN2-213	ENST00000591901	IL17RD	Q8NFM7	739 aa		4.87	□□□□□ -1.63
PTPN2-213	ENST00000591901	NTN5	Q8WTR8	489 aa	Predicted RBP	4.87	□□□□□ -1.63
PTPN2-213	ENST00000591901	HPS3	Q969F9	1004 aa		4.87	□□□□□ -1.63
PTPN2-213	ENST00000591901	BBC3	Q96PG8	261 aa	Predicted RBP	4.87	□□□□□ -1.63
PTPN2-213	ENST00000591901	MAN1C1	Q9NR34	630 aa		4.87	□□□□□ -1.63
PTPN2-213	ENST00000591901	SALL3	Q9BXA9	1300 aa		4.87	□□□□□ -1.63
PTPN2-213	ENST00000591901	LRRC14B	A6NHZ5	514 aa		4.86	□□□□□ -1.63
PTPN2-213	ENST00000591901	ERN1	O75460	977 aa	Known RBP	4.86	□□□□□ -1.63
PTPN2-213	ENST00000591901	MTHFD1	P11586	935 aa	Known RBP	4.86	□□□□□ -1.63
PTPN2-213	ENST00000591901	CXCR5	P32302	372 aa		4.86	□□□□□ -1.63
PTPN2-213	ENST00000591901	ZNF280A	P59817	542 aa	Predicted RBP	4.86	□□□□□ -1.63
PTPN2-213	ENST00000591901	TLE1	Q04724	770 aa		4.86	□□□□□ -1.63
PTPN2-213	ENST00000591901	RAB39A	Q14964	217 aa		4.86	□□□□□ -1.63
PTPN2-213	ENST00000591901	FLYWCH1	Q4VC44	716 aa		4.86	□□□□□ -1.63
PTPN2-213	ENST00000591901	KHDC1	Q4VXA5	237 aa	Known RBP	4.86	□□□□□ -1.63
PTPN2-213	ENST00000591901	LNX2	Q8N448	690 aa		4.86	□□□□□ -1.63
PTPN2-213	ENST00000591901	ZBTB34	Q8NCN2	500 aa		4.86	□□□□□ -1.63
PTPN2-213	ENST00000591901	TTC8	Q8TAM2	541 aa		4.86	□□□□□ -1.63
PTPN2-213	ENST00000591901	DIS3L	Q8TF46	1054 aa	Known RBP	4.86	□□□□□ -1.63
PTPN2-213	ENST00000591901	DMRTA2	Q96SC8	542 aa		4.86	□□□□□ -1.63
PTPN2-213	ENST00000591901	VRK1	Q99986	396 aa	Predicted RBP	4.86	□□□□□ -1.63
PTPN2-213	ENST00000591901	TLR10	Q9BXR5	811 aa		4.86	□□□□□ -1.63
PTPN2-213	ENST00000591901	R3HDML	Q9H3Y0	253 aa		4.86	□□□□□ -1.63
PTPN2-213	ENST00000591901	SLAMF7	Q9NQ25	335 aa		4.86	□□□□□ -1.63
PTPN2-213	ENST00000591901	VSX1	Q9NZR4	365 aa	Predicted RBP	4.86	□□□□□ -1.63
PTPN2-213	ENST00000591901	JKAMP	Q9P055	326 aa		4.86	□□□□□ -1.63
PTPN2-213	ENST00000591901	PCDHB1	Q9Y5F3	818 aa		4.86	□□□□□ -1.63
PTPN2-213	ENST00000591901		A0A1W2PS29	197 aa		4.85	□□□□□ -1.63
PTPN2-213	ENST00000591901	ERC2	O15083	957 aa		4.85	□□□□□ -1.63
PTPN2-213	ENST00000591901	AGFG2	O95081	481 aa		4.85	□□□□□ -1.63
PTPN2-213	ENST00000591901	CD1A	P06126	327 aa		4.85	□□□□□ -1.63
PTPN2-213	ENST00000591901	ZNF169	Q14929	603 aa	Predicted RBP	4.85	□□□□□ -1.63
PTPN2-213	ENST00000591901	ERCC6L	Q2NKX8	1250 aa		4.85	□□□□□ -1.63
PTPN2-213	ENST00000591901	ATAT1	Q5SQI0	421 aa		4.85	□□□□□ -1.63
PTPN2-213	ENST00000591901	ZNF362	Q5T0B9	420 aa	Predicted RBP	4.85	□□□□□ -1.63
PTPN2-213	ENST00000591901	UTP14C	Q5TAP6	766 aa	Known RBP	4.85	□□□□□ -1.63
PTPN2-213	ENST00000591901	DENND1C	Q8IV53	801 aa		4.85	□□□□□ -1.63
PTPN2-213	ENST00000591901	COLGALT2	Q8IYK4	626 aa		4.85	□□□□□ -1.63
PTPN2-213	ENST00000591901	FAM98A	Q8NCA5	519 aa	Known RBP	4.85	□□□□□ -1.63
PTPN2-213	ENST00000591901	C3orf20	Q8ND61	904 aa		4.85	□□□□□ -1.63
PTPN2-213	ENST00000591901	PPP1R35	Q8TAP8	253 aa		4.85	□□□□□ -1.63
PTPN2-213	ENST00000591901	SLC35G2	Q8TBE7	412 aa		4.85	□□□□□ -1.63
PTPN2-213	ENST00000591901	SSH3	Q8TE77	659 aa		4.85	□□□□□ -1.63
PTPN2-213	ENST00000591901	NSUN6	Q8TEA1	469 aa	Known RBP	4.85	□□□□□ -1.63
PTPN2-213	ENST00000591901	C1GALT1C1	Q96EU7	318 aa		4.85	□□□□□ -1.63
PTPN2-213	ENST00000591901	PTCD3	Q96EY7	689 aa	Known RBP	4.85	□□□□□ -1.63
PTPN2-213	ENST00000591901	KLHL32	Q96NJ5	620 aa		4.85	□□□□□ -1.63
PTPN2-213	ENST00000591901	TAAR9	Q96RI9	348 aa		4.85	□□□□□ -1.63
PTPN2-213	ENST00000591901	ACO2	Q99798	780 aa	Known RBP	4.85	□□□□□ -1.63
PTPN2-213	ENST00000591901	SLC12A5	Q9H2X9	1139 aa		4.85	□□□□□ -1.63
PTPN2-213	ENST00000591901	ARMT1	Q9H993	441 aa		4.85	□□□□□ -1.63
PTPN2-213	ENST00000591901	CASS4	Q9NQ75	786 aa		4.85	□□□□□ -1.63
PTPN2-213	ENST00000591901	KCTD5	Q9NXV2	234 aa		4.85	□□□□□ -1.63
PTPN2-213	ENST00000591901	FOXJ2	Q9P0K8	574 aa		4.85	□□□□□ -1.63
PTPN2-213	ENST00000591901	CALCOCO1	Q9P1Z2	691 aa		4.85	□□□□□ -1.63
PTPN2-213	ENST00000591901	CTTNBP2NL	Q9P2B4	639 aa		4.85	□□□□□ -1.63
PTPN2-213	ENST00000591901	FEZ2	Q9UHY8	353 aa	Predicted RBP	4.85	□□□□□ -1.63
PTPN2-213	ENST00000591901	POLH	Q9Y253	713 aa		4.85	□□□□□ -1.63
PTPN2-213	ENST00000591901	PCDHA3	Q9Y5H8	950 aa		4.85	□□□□□ -1.63
PTPN2-213	ENST00000591901	NR2E3	Q9Y5X4	410 aa		4.85	□□□□□ -1.63
PTPN2-213	ENST00000591901	FRMPD2	Q68DX3	1309 aa	Predicted RBP	4.84	□□□□□ -1.63
PTPN2-213	ENST00000591901		H3BUI4	141 aa		4.84	□□□□□ -1.63
PTPN2-213	ENST00000591901	MGST3	O14880	152 aa		4.84	□□□□□ -1.63
PTPN2-213	ENST00000591901	SLC43A1	O75387	559 aa		4.84	□□□□□ -1.63
PTPN2-213	ENST00000591901	MAP2K6	P52564	334 aa		4.84	□□□□□ -1.63
PTPN2-213	ENST00000591901	SIM1	P81133	766 aa	Predicted RBP	4.84	□□□□□ -1.63
PTPN2-213	ENST00000591901	CCDC181	Q5TID7	509 aa		4.84	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms