RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 CDK5RAP3Q96JB5 506 aa11.32□□□□□ -0.6
VPS4B-207ENST00000591519 ZNF512Q96ME7 567 aaPredicted RBP11.32□□□□□ -0.6
VPS4B-207ENST00000591519 KXD1Q9BQD3 176 aa11.32□□□□□ -0.6
VPS4B-207ENST00000591519 CORO1BQ9BR76 489 aa11.32□□□□□ -0.6
VPS4B-207ENST00000591519 PRR14Q9BWN1 585 aa11.32□□□□□ -0.6
VPS4B-207ENST00000591519 BCO2Q9BYV7 579 aa11.32□□□□□ -0.6
VPS4B-207ENST00000591519 ZFP14Q9HCL3 533 aa11.32□□□□□ -0.6
VPS4B-207ENST00000591519 TRPV5Q9NQA5 729 aa11.32□□□□□ -0.6
VPS4B-207ENST00000591519 BLOC1S4Q9NUP1 217 aa11.32□□□□□ -0.6
VPS4B-207ENST00000591519 ANKFY1Q9P2R3 1169 aa11.32□□□□□ -0.6
VPS4B-207ENST00000591519 FBXO4Q9UKT5 387 aa11.32□□□□□ -0.6
VPS4B-207ENST00000591519 TBX20Q9UMR3 447 aa11.32□□□□□ -0.6
VPS4B-207ENST00000591519 UBQLN1Q9UMX0 589 aaKnown RBP11.32□□□□□ -0.6
VPS4B-207ENST00000591519 GVINP1Q7Z2Y8 2422 aa11.32□□□□□ -0.6
VPS4B-207ENST00000591519 A0A0B4J269 797 aa11.31□□□□□ -0.6
VPS4B-207ENST00000591519 SHISA7A6NL88 538 aa11.31□□□□□ -0.6
VPS4B-207ENST00000591519 LACTBL1A8MY62 500 aa11.31□□□□□ -0.6
VPS4B-207ENST00000591519 RNF223E7ERA6 249 aa11.31□□□□□ -0.6
VPS4B-207ENST00000591519 OGTO15294 1046 aa11.31□□□□□ -0.6
VPS4B-207ENST00000591519 LRRN2O75325 713 aa11.31□□□□□ -0.6
VPS4B-207ENST00000591519 MOSPD3O75425 235 aa11.31□□□□□ -0.6
VPS4B-207ENST00000591519 HSP90AA1P07900 732 aaKnown RBP11.31□□□□□ -0.6
VPS4B-207ENST00000591519 HARSP12081 509 aaKnown RBP11.31□□□□□ -0.6
VPS4B-207ENST00000591519 CEBPBP17676 345 aa11.31□□□□□ -0.6
VPS4B-207ENST00000591519 FCARP24071 287 aa11.31□□□□□ -0.6
VPS4B-207ENST00000591519 ABCD1P33897 745 aa11.31□□□□□ -0.6
VPS4B-207ENST00000591519 LONP1P36776 959 aaKnown RBP11.31□□□□□ -0.6
VPS4B-207ENST00000591519 CCR2P41597 374 aa11.31□□□□□ -0.6
VPS4B-207ENST00000591519 RPS9P46781 194 aaKnown RBP11.31□□□□□ -0.6
VPS4B-207ENST00000591519 ARPP19P56211 112 aa11.31□□□□□ -0.6
VPS4B-207ENST00000591519 GTF2BQ00403 316 aa11.31□□□□□ -0.6
VPS4B-207ENST00000591519 POU5F1Q01860 360 aaKnown RBP11.31□□□□□ -0.6
VPS4B-207ENST00000591519 YWHAHQ04917 246 aaPredicted RBP11.31□□□□□ -0.6
VPS4B-207ENST00000591519 FAM78AQ5JUQ0 283 aa11.31□□□□□ -0.6
VPS4B-207ENST00000591519 ZBTB41Q5SVQ8 909 aa11.31□□□□□ -0.6
VPS4B-207ENST00000591519 CYP4A22Q5TCH4 519 aa11.31□□□□□ -0.6
VPS4B-207ENST00000591519 SPATA1Q5VX52 437 aa11.31□□□□□ -0.6
VPS4B-207ENST00000591519 IQCEQ6IPM2 695 aa11.31□□□□□ -0.6
VPS4B-207ENST00000591519 ZC3H14Q6PJT7 736 aaKnown RBP11.31□□□□□ -0.6
VPS4B-207ENST00000591519 RNF19BQ6ZMZ0 732 aa11.31□□□□□ -0.6
VPS4B-207ENST00000591519 PDZD4Q76G19 769 aaPredicted RBP11.31□□□□□ -0.6
VPS4B-207ENST00000591519 MAP4K3Q8IVH8 894 aa11.31□□□□□ -0.6
VPS4B-207ENST00000591519 LRRC15Q8TF66 581 aa11.31□□□□□ -0.6
VPS4B-207ENST00000591519 DNASE1L2Q92874 299 aa11.31□□□□□ -0.6
VPS4B-207ENST00000591519 TCEAL4Q96EI5 215 aa11.31□□□□□ -0.6
VPS4B-207ENST00000591519 CALML4Q96GE6 196 aa11.31□□□□□ -0.6
VPS4B-207ENST00000591519 ASB16Q96NS5 453 aa11.31□□□□□ -0.6
VPS4B-207ENST00000591519 FIZ1Q96SL8 496 aa11.31□□□□□ -0.6
VPS4B-207ENST00000591519 REEP2Q9BRK0 252 aa11.31□□□□□ -0.6
VPS4B-207ENST00000591519 GPR88Q9GZN0 384 aa11.31□□□□□ -0.6
VPS4B-207ENST00000591519 TRPV4Q9HBA0 871 aa11.31□□□□□ -0.6
VPS4B-207ENST00000591519 PARVGQ9HBI0 331 aa11.31□□□□□ -0.6
VPS4B-207ENST00000591519 LTB4R2Q9NPC1 389 aa11.31□□□□□ -0.6
VPS4B-207ENST00000591519 CEP72Q9P209 647 aa11.31□□□□□ -0.6
VPS4B-207ENST00000591519 TUBGCP4Q9UGJ1 667 aa11.31□□□□□ -0.6
VPS4B-207ENST00000591519 EP300Q09472 2414 aaPredicted RBP11.31□□□□□ -0.6
VPS4B-207ENST00000591519 RCCD1A6NED2 376 aa11.3□□□□□ -0.6
VPS4B-207ENST00000591519 OR6C75A6NL08 312 aa11.3□□□□□ -0.6
VPS4B-207ENST00000591519 NCAM2O15394 837 aa11.3□□□□□ -0.6
VPS4B-207ENST00000591519 XPOTO43592 962 aaKnown RBP11.3□□□□□ -0.6
VPS4B-207ENST00000591519 TRAK2O60296 914 aa11.3□□□□□ -0.6
VPS4B-207ENST00000591519 VNN2O95498 520 aa11.3□□□□□ -0.6
VPS4B-207ENST00000591519 TYMPP19971 482 aa11.3□□□□□ -0.6
VPS4B-207ENST00000591519 DDIT3P35638 169 aa11.3□□□□□ -0.6
VPS4B-207ENST00000591519 TNFSF9P41273 254 aa11.3□□□□□ -0.6
VPS4B-207ENST00000591519 LIG4P49917 911 aa11.3□□□□□ -0.6
VPS4B-207ENST00000591519 MLLT6P55198 1093 aaPredicted RBP11.3□□□□□ -0.6
VPS4B-207ENST00000591519 LILRA4P59901 499 aa11.3□□□□□ -0.6
VPS4B-207ENST00000591519 SPAG1Q07617 926 aa11.3□□□□□ -0.6
VPS4B-207ENST00000591519 TWF1Q12792 350 aa11.3□□□□□ -0.6
VPS4B-207ENST00000591519 GPR17Q13304 367 aa11.3□□□□□ -0.6
VPS4B-207ENST00000591519 ENOX2Q16206 610 aaKnown RBP11.3□□□□□ -0.6
VPS4B-207ENST00000591519 ZNF852Q6ZMS4 543 aa11.3□□□□□ -0.6
VPS4B-207ENST00000591519 BRAPQ7Z569 592 aa11.3□□□□□ -0.6
VPS4B-207ENST00000591519 GPBP1Q86WP2 473 aa11.3□□□□□ -0.6
VPS4B-207ENST00000591519 ELMOD1Q8N336 334 aa11.3□□□□□ -0.6
VPS4B-207ENST00000591519 MYCT1Q8N699 235 aa11.3□□□□□ -0.6
VPS4B-207ENST00000591519 NELL1Q92832 810 aa11.3□□□□□ -0.6
VPS4B-207ENST00000591519 SMARCD2Q92925 531 aa11.3□□□□□ -0.6
VPS4B-207ENST00000591519 SNX21Q969T3 373 aa11.3□□□□□ -0.6
VPS4B-207ENST00000591519 ZSWIM3Q96MP5 696 aa11.3□□□□□ -0.6
VPS4B-207ENST00000591519 TRMT61BQ9BVS5 477 aaKnown RBP11.3□□□□□ -0.6
VPS4B-207ENST00000591519 LRRC3Q9BY71 257 aa11.3□□□□□ -0.6
VPS4B-207ENST00000591519 CCSER1Q9C0I3 900 aa11.3□□□□□ -0.6
VPS4B-207ENST00000591519 ST6GALNAC4Q9H4F1 302 aa11.3□□□□□ -0.6
VPS4B-207ENST00000591519 RPF1Q9H9Y2 349 aaKnown RBP11.3□□□□□ -0.6
VPS4B-207ENST00000591519 HSFX1Q9UBD0 423 aa11.3□□□□□ -0.6
VPS4B-207ENST00000591519 CPSF3Q9UKF6 684 aaKnown RBP11.3□□□□□ -0.6
VPS4B-207ENST00000591519 MRPS17Q9Y2R5 130 aaKnown RBP11.3□□□□□ -0.6
VPS4B-207ENST00000591519 DERAQ9Y315 318 aa11.3□□□□□ -0.6
VPS4B-207ENST00000591519 STYXL1Q9Y6J8 313 aa11.3□□□□□ -0.6
VPS4B-207ENST00000591519 R4GN57 208 aa11.3□□□□□ -0.6
VPS4B-207ENST00000591519 ZNF292O60281 2723 aa11.3□□□□□ -0.6
VPS4B-207ENST00000591519 MIA3Q5JRA6 1907 aa11.3□□□□□ -0.6
VPS4B-207ENST00000591519 PIRO00625 290 aa11.29□□□□□ -0.6
VPS4B-207ENST00000591519 MAN2B1O00754 1011 aa11.29□□□□□ -0.6
VPS4B-207ENST00000591519 HNRNPDLO14979 420 aaKnown RBP11.29□□□□□ -0.6
VPS4B-207ENST00000591519 PSMC3P17980 439 aa11.29□□□□□ -0.6
VPS4B-207ENST00000591519 CD72P21854 359 aa11.29□□□□□ -0.6
VPS4B-207ENST00000591519 TARSP26639 723 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms