RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 SIX4Q9UIU6 781 aa9.92□□□□□ -0.82
DNMT1-223ENST00000591239 AGAP1Q9UPQ3 857 aa9.92□□□□□ -0.82
DNMT1-223ENST00000591239 USTQ9Y2C2 406 aa9.92□□□□□ -0.82
DNMT1-223ENST00000591239 C2orf16Q68DN1 1984 aa9.92□□□□□ -0.82
DNMT1-223ENST00000591239 CLUHO75153 1309 aa9.91□□□□□ -0.82
DNMT1-223ENST00000591239 OR6C75A6NL08 312 aa9.91□□□□□ -0.82
DNMT1-223ENST00000591239 C2CD4DB7Z1M9 353 aa9.91□□□□□ -0.82
DNMT1-223ENST00000591239 PRRG1O14668 218 aa9.91□□□□□ -0.82
DNMT1-223ENST00000591239 CCL16O15467 120 aa9.91□□□□□ -0.82
DNMT1-223ENST00000591239 DCXO43602 365 aa9.91□□□□□ -0.82
DNMT1-223ENST00000591239 EXOC3O60645 756 aa9.91□□□□□ -0.82
DNMT1-223ENST00000591239 GADD45BO75293 160 aaPredicted RBP9.91□□□□□ -0.82
DNMT1-223ENST00000591239 TNNC2P02585 160 aa9.91□□□□□ -0.82
DNMT1-223ENST00000591239 CYP11A1P05108 521 aa9.91□□□□□ -0.82
DNMT1-223ENST00000591239 KRT19P08727 400 aa9.91□□□□□ -0.82
DNMT1-223ENST00000591239 DLATP10515 647 aaKnown RBP9.91□□□□□ -0.82
DNMT1-223ENST00000591239 ALADP13716 330 aa9.91□□□□□ -0.82
DNMT1-223ENST00000591239 CPB1P15086 417 aa9.91□□□□□ -0.82
DNMT1-223ENST00000591239 ELF1P32519 619 aa9.91□□□□□ -0.82
DNMT1-223ENST00000591239 PNPLA4P41247 253 aa9.91□□□□□ -0.82
DNMT1-223ENST00000591239 RBP5P82980 135 aa9.91□□□□□ -0.82
DNMT1-223ENST00000591239 PSMD6Q15008 389 aa9.91□□□□□ -0.82
DNMT1-223ENST00000591239 SCARA3Q6AZY7 606 aa9.91□□□□□ -0.82
DNMT1-223ENST00000591239 WDR49Q8IV35 697 aa9.91□□□□□ -0.82
DNMT1-223ENST00000591239 SLC9A9Q8IVB4 645 aa9.91□□□□□ -0.82
DNMT1-223ENST00000591239 TCEAL8Q8IYN2 117 aa9.91□□□□□ -0.82
DNMT1-223ENST00000591239 GUF1Q8N442 669 aaKnown RBP9.91□□□□□ -0.82
DNMT1-223ENST00000591239 LRRC52Q8N7C0 313 aa9.91□□□□□ -0.82
DNMT1-223ENST00000591239 CCDC127Q96BQ5 260 aa9.91□□□□□ -0.82
DNMT1-223ENST00000591239 BORCS6Q96GS4 357 aa9.91□□□□□ -0.82
DNMT1-223ENST00000591239 MFSD14AQ96MC6 490 aa9.91□□□□□ -0.82
DNMT1-223ENST00000591239 TIGD1Q96MW7 591 aa9.91□□□□□ -0.82
DNMT1-223ENST00000591239 FNBP1Q96RU3 617 aa9.91□□□□□ -0.82
DNMT1-223ENST00000591239 CYP4F11Q9HBI6 524 aa9.91□□□□□ -0.82
DNMT1-223ENST00000591239 MUTYHQ9UIF7 546 aa9.91□□□□□ -0.82
DNMT1-223ENST00000591239 HOOK1Q9UJC3 728 aaKnown RBP9.91□□□□□ -0.82
DNMT1-223ENST00000591239 DSEQ9UL01 958 aa9.91□□□□□ -0.82
DNMT1-223ENST00000591239 MAPK8IP1Q9UQF2 711 aa9.91□□□□□ -0.82
DNMT1-223ENST00000591239 CALUO43852 315 aaPredicted RBP9.9□□□□□ -0.82
DNMT1-223ENST00000591239 N4BP1O75113 896 aaKnown RBP9.9□□□□□ -0.82
DNMT1-223ENST00000591239 XYLBO75191 536 aa9.9□□□□□ -0.82
DNMT1-223ENST00000591239 PRPF40AO75400 957 aaKnown RBP9.9□□□□□ -0.82
DNMT1-223ENST00000591239 SMC2O95347 1197 aa9.9□□□□□ -0.82
DNMT1-223ENST00000591239 SEC24AO95486 1093 aa9.9□□□□□ -0.82
DNMT1-223ENST00000591239 NR3C1P04150 777 aa9.9□□□□□ -0.82
DNMT1-223ENST00000591239 POU2F2P09086 479 aa9.9□□□□□ -0.82
DNMT1-223ENST00000591239 OR4Q2P0C623 313 aa9.9□□□□□ -0.82
DNMT1-223ENST00000591239 TNNI1P19237 187 aa9.9□□□□□ -0.82
DNMT1-223ENST00000591239 ADCY1Q08828 1119 aa9.9□□□□□ -0.82
DNMT1-223ENST00000591239 BFSP1Q12934 665 aa9.9□□□□□ -0.82
DNMT1-223ENST00000591239 MYO1EQ12965 1108 aa9.9□□□□□ -0.82
DNMT1-223ENST00000591239 MYBPC2Q14324 1141 aa9.9□□□□□ -0.82
DNMT1-223ENST00000591239 WSCD1Q658N2 575 aa9.9□□□□□ -0.82
DNMT1-223ENST00000591239 RNF19BQ6ZMZ0 732 aa9.9□□□□□ -0.82
DNMT1-223ENST00000591239 OTOP3Q7RTS5 596 aa9.9□□□□□ -0.82
DNMT1-223ENST00000591239 TRAPPC11Q7Z392 1133 aa9.9□□□□□ -0.82
DNMT1-223ENST00000591239 GRASPQ7Z6J2 395 aaPredicted RBP9.9□□□□□ -0.82
DNMT1-223ENST00000591239 METTL23Q86XA0 190 aa9.9□□□□□ -0.82
DNMT1-223ENST00000591239 ZDHHC14Q8IZN3 488 aa9.9□□□□□ -0.82
DNMT1-223ENST00000591239 TDRD5Q8NAT2 981 aaKnown RBP9.9□□□□□ -0.82
DNMT1-223ENST00000591239 SPATA20Q8TB22 786 aa9.9□□□□□ -0.82
DNMT1-223ENST00000591239 ERCC4Q92889 916 aaPredicted RBP9.9□□□□□ -0.82
DNMT1-223ENST00000591239 ACSF2Q96CM8 615 aaPredicted RBP9.9□□□□□ -0.82
DNMT1-223ENST00000591239 GSDMAQ96QA5 445 aa9.9□□□□□ -0.82
DNMT1-223ENST00000591239 CGRRF1Q99675 332 aa9.9□□□□□ -0.82
DNMT1-223ENST00000591239 GZF1Q9H116 711 aaPredicted RBP9.9□□□□□ -0.82
DNMT1-223ENST00000591239 RMND1Q9NWS8 449 aa9.9□□□□□ -0.82
DNMT1-223ENST00000591239 GDAP2Q9NXN4 497 aa9.9□□□□□ -0.82
DNMT1-223ENST00000591239 LIMD1Q9UGP4 676 aa9.9□□□□□ -0.82
DNMT1-223ENST00000591239 AFF4Q9UHB7 1163 aaKnown RBP9.9□□□□□ -0.82
DNMT1-223ENST00000591239 MAFFQ9ULX9 164 aa9.9□□□□□ -0.82
DNMT1-223ENST00000591239 POLIQ9UNA4 740 aa9.9□□□□□ -0.82
DNMT1-223ENST00000591239 TRAF3IP3Q9Y228 551 aa9.9□□□□□ -0.82
DNMT1-223ENST00000591239 R3HCC1Q9Y3T6 440 aaKnown RBP9.9□□□□□ -0.82
DNMT1-223ENST00000591239 PCDHA5Q9Y5H7 936 aa9.9□□□□□ -0.82
DNMT1-223ENST00000591239 WDFY4Q6ZS81 3184 aa9.89□□□□□ -0.83
DNMT1-223ENST00000591239 KINO60870 393 aaKnown RBP9.89□□□□□ -0.83
DNMT1-223ENST00000591239 HUS1O60921 280 aa9.89□□□□□ -0.83
DNMT1-223ENST00000591239 LRG1P02750 347 aa9.89□□□□□ -0.83
DNMT1-223ENST00000591239 CASP4P49662 377 aa9.89□□□□□ -0.83
DNMT1-223ENST00000591239 NTHL1P78549 312 aa9.89□□□□□ -0.83
DNMT1-223ENST00000591239 GPR17Q13304 367 aa9.89□□□□□ -0.83
DNMT1-223ENST00000591239 ELOA2Q8IYF1 753 aaPredicted RBP9.89□□□□□ -0.83
DNMT1-223ENST00000591239 SMYD4Q8IYR2 804 aaPredicted RBP9.89□□□□□ -0.83
DNMT1-223ENST00000591239 THEM5Q8N1Q8 247 aa9.89□□□□□ -0.83
DNMT1-223ENST00000591239 PDCL2Q8N4E4 241 aa9.89□□□□□ -0.83
DNMT1-223ENST00000591239 OR10T2Q8NGX3 314 aa9.89□□□□□ -0.83
DNMT1-223ENST00000591239 PLEKHO2Q8TD55 490 aa9.89□□□□□ -0.83
DNMT1-223ENST00000591239 PARD3BQ8TEW8 1205 aa9.89□□□□□ -0.83
DNMT1-223ENST00000591239 ZNF516Q92618 1163 aa9.89□□□□□ -0.83
DNMT1-223ENST00000591239 SMARCE1Q969G3 411 aa9.89□□□□□ -0.83
DNMT1-223ENST00000591239 HPDLQ96IR7 371 aa9.89□□□□□ -0.83
DNMT1-223ENST00000591239 PGLYRP2Q96PD5 576 aa9.89□□□□□ -0.83
DNMT1-223ENST00000591239 TMEM209Q96SK2 561 aa9.89□□□□□ -0.83
DNMT1-223ENST00000591239 RTP3Q9BQQ7 232 aa9.89□□□□□ -0.83
DNMT1-223ENST00000591239 C1QTNF1Q9BXJ1 281 aa9.89□□□□□ -0.83
DNMT1-223ENST00000591239 HCFC1R1Q9NWW0 138 aa9.89□□□□□ -0.83
DNMT1-223ENST00000591239 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.89□□□□□ -0.83
DNMT1-223ENST00000591239 FRMD4BQ9Y2L6 1034 aa9.89□□□□□ -0.83
DNMT1-223ENST00000591239 INSL5Q9Y5Q6 135 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms