RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 CPNE9Q8IYJ1 553 aa16.02■□□□□ 0.16
CIRBP-228ENST00000590347 STKLD1Q8NE28 680 aa16.02■□□□□ 0.16
CIRBP-228ENST00000590347 ZFP28Q8NHY6 868 aa16.02■□□□□ 0.16
CIRBP-228ENST00000590347 PPARGC1AQ9UBK2 798 aaKnown RBP16.02■□□□□ 0.16
CIRBP-228ENST00000590347 SLC7A8Q9UHI5 535 aa16.02■□□□□ 0.16
CIRBP-228ENST00000590347 FOXN3O00409 490 aaPredicted RBP16.02■□□□□ 0.15
CIRBP-228ENST00000590347 HOXD12P35452 270 aa16.02■□□□□ 0.15
CIRBP-228ENST00000590347 ATXN3P54252 364 aaPredicted RBP16.02■□□□□ 0.15
CIRBP-228ENST00000590347 EMP3P54852 163 aa16.02■□□□□ 0.15
CIRBP-228ENST00000590347 COG2Q14746 738 aa16.02■□□□□ 0.15
CIRBP-228ENST00000590347 MAP7D1Q3KQU3 841 aa16.02■□□□□ 0.15
CIRBP-228ENST00000590347 KLC3Q6P597 504 aa16.02■□□□□ 0.15
CIRBP-228ENST00000590347 CCDC174Q6PII3 467 aa16.02■□□□□ 0.15
CIRBP-228ENST00000590347 NLRX1Q86UT6 975 aa16.02■□□□□ 0.15
CIRBP-228ENST00000590347 SFR1Q86XK3 245 aa16.02■□□□□ 0.15
CIRBP-228ENST00000590347 GLIS1Q8NBF1 620 aa16.02■□□□□ 0.15
CIRBP-228ENST00000590347 MTBPQ96DY7 904 aa16.02■□□□□ 0.15
CIRBP-228ENST00000590347 BMP2KQ9NSY1 1161 aaPredicted RBP16.02■□□□□ 0.15
CIRBP-228ENST00000590347 KLHL11Q9NVR0 708 aa16.02■□□□□ 0.15
CIRBP-228ENST00000590347 FAF1Q9UNN5 650 aaPredicted RBP16.02■□□□□ 0.15
CIRBP-228ENST00000590347 CAPN8A6NHC0 703 aa16.01■□□□□ 0.15
CIRBP-228ENST00000590347 TTLL13PA6NNM8 815 aa16.01■□□□□ 0.15
CIRBP-228ENST00000590347 H3BSA7 217 aa16.01■□□□□ 0.15
CIRBP-228ENST00000590347 ETS1P14921 441 aa16.01■□□□□ 0.15
CIRBP-228ENST00000590347 GCAP28676 217 aa16.01■□□□□ 0.15
CIRBP-228ENST00000590347 SOX5P35711 763 aa16.01■□□□□ 0.15
CIRBP-228ENST00000590347 ARL4CP56559 192 aa16.01■□□□□ 0.15
CIRBP-228ENST00000590347 CD300CQ08708 224 aa16.01■□□□□ 0.15
CIRBP-228ENST00000590347 SIX1Q15475 284 aaPredicted RBP16.01■□□□□ 0.15
CIRBP-228ENST00000590347 TMEM53Q6P2H8 277 aa16.01■□□□□ 0.15
CIRBP-228ENST00000590347 SLC30A5Q8TAD4 765 aa16.01■□□□□ 0.15
CIRBP-228ENST00000590347 DENND1AQ8TEH3 1009 aa16.01■□□□□ 0.15
CIRBP-228ENST00000590347 CEP63Q96MT8 703 aa16.01■□□□□ 0.15
CIRBP-228ENST00000590347 ANKFY1Q9P2R3 1169 aa16.01■□□□□ 0.15
CIRBP-228ENST00000590347 ADAMTS6Q9UKP5 1117 aa16.01■□□□□ 0.15
CIRBP-228ENST00000590347 FRMPD2Q68DX3 1309 aaPredicted RBP16.01■□□□□ 0.15
CIRBP-228ENST00000590347 C15orf38-AP3S2A0A0A6YYH1 394 aa16.01■□□□□ 0.15
CIRBP-228ENST00000590347 A0A0A6YYK5 440 aaPredicted RBP16.01■□□□□ 0.15
CIRBP-228ENST00000590347 DCAF8L1A6NGE4 600 aa16.01■□□□□ 0.15
CIRBP-228ENST00000590347 E5RJQ4 531 aa16.01■□□□□ 0.15
CIRBP-228ENST00000590347 H0YIN7 160 aa16.01■□□□□ 0.15
CIRBP-228ENST00000590347 ALAS1P13196 640 aa16.01■□□□□ 0.15
CIRBP-228ENST00000590347 VCLP18206 1134 aa16.01■□□□□ 0.15
CIRBP-228ENST00000590347 SERPINB6P35237 376 aa16.01■□□□□ 0.15
CIRBP-228ENST00000590347 ALDH18A1P54886 795 aaKnown RBP16.01■□□□□ 0.15
CIRBP-228ENST00000590347 OXCT1P55809 520 aa16.01■□□□□ 0.15
CIRBP-228ENST00000590347 PSMC6P62333 389 aa16.01■□□□□ 0.15
CIRBP-228ENST00000590347 CYLC2Q14093 348 aaPredicted RBP16.01■□□□□ 0.15
CIRBP-228ENST00000590347 SF3B3Q15393 1217 aaKnown RBP16.01■□□□□ 0.15
CIRBP-228ENST00000590347 PCNX4Q63HM2 1172 aa16.01■□□□□ 0.15
CIRBP-228ENST00000590347 C1orf228Q6PIY5 440 aa16.01■□□□□ 0.15
CIRBP-228ENST00000590347 B3GNT6Q6ZMB0 384 aa16.01■□□□□ 0.15
CIRBP-228ENST00000590347 ARPINQ7Z6K5 226 aa16.01■□□□□ 0.15
CIRBP-228ENST00000590347 NENFQ9UMX5 172 aa16.01■□□□□ 0.15
CIRBP-228ENST00000590347 GMEB1Q9Y692 573 aa16.01■□□□□ 0.15
CIRBP-228ENST00000590347 PLA2G4BP0C869 781 aa16.01■□□□□ 0.15
CIRBP-228ENST00000590347 HIBADHP31937 336 aaKnown RBP16.01■□□□□ 0.15
CIRBP-228ENST00000590347 GTF2H1P32780 548 aa16.01■□□□□ 0.15
CIRBP-228ENST00000590347 SLC25A3Q00325 362 aa16.01■□□□□ 0.15
CIRBP-228ENST00000590347 MYLK3Q32MK0 819 aa16.01■□□□□ 0.15
CIRBP-228ENST00000590347 SYCP2LQ5T4T6 812 aa16.01■□□□□ 0.15
CIRBP-228ENST00000590347 IZUMO3Q5VZ72 239 aa16.01■□□□□ 0.15
CIRBP-228ENST00000590347 GSTA5Q7RTV2 222 aa16.01■□□□□ 0.15
CIRBP-228ENST00000590347 KAT5Q92993 513 aa16.01■□□□□ 0.15
CIRBP-228ENST00000590347 SLC35C1Q96A29 364 aa16.01■□□□□ 0.15
CIRBP-228ENST00000590347 SNF8Q96H20 258 aa16.01■□□□□ 0.15
CIRBP-228ENST00000590347 CNBD2Q96M20 576 aa16.01■□□□□ 0.15
CIRBP-228ENST00000590347 CCDC77Q9BR77 488 aa16.01■□□□□ 0.15
CIRBP-228ENST00000590347 TMOD2Q9NZR1 351 aa16.01■□□□□ 0.15
CIRBP-228ENST00000590347 CIB2O75838 187 aa16■□□□□ 0.15
CIRBP-228ENST00000590347 MAGEA4P43358 317 aa16■□□□□ 0.15
CIRBP-228ENST00000590347 CYP2J2P51589 502 aa16■□□□□ 0.15
CIRBP-228ENST00000590347 JAM2P57087 298 aa16■□□□□ 0.15
CIRBP-228ENST00000590347 AP2B1P63010 937 aa16■□□□□ 0.15
CIRBP-228ENST00000590347 MECOMQ03112 1051 aa16■□□□□ 0.15
CIRBP-228ENST00000590347 RASA2Q15283 850 aa16■□□□□ 0.15
CIRBP-228ENST00000590347 GRIK5Q16478 980 aa16■□□□□ 0.15
CIRBP-228ENST00000590347 PPP2R5EQ16537 467 aa16■□□□□ 0.15
CIRBP-228ENST00000590347 ZNF568Q3ZCX4 644 aa16■□□□□ 0.15
CIRBP-228ENST00000590347 ULK2Q8IYT8 1036 aa16■□□□□ 0.15
CIRBP-228ENST00000590347 REXO1Q8N1G1 1221 aaKnown RBP16■□□□□ 0.15
CIRBP-228ENST00000590347 PCDH18Q9HCL0 1135 aa16■□□□□ 0.15
CIRBP-228ENST00000590347 DDX43Q9NXZ2 648 aaKnown RBP16■□□□□ 0.15
CIRBP-228ENST00000590347 STK17AQ9UEE5 414 aa16■□□□□ 0.15
CIRBP-228ENST00000590347 ZMYM2Q9UBW7 1377 aa16■□□□□ 0.15
CIRBP-228ENST00000590347 LAD1O00515 517 aa16■□□□□ 0.15
CIRBP-228ENST00000590347 BGNP21810 368 aa16■□□□□ 0.15
CIRBP-228ENST00000590347 HOXD13P35453 343 aa16■□□□□ 0.15
CIRBP-228ENST00000590347 MAP3K10Q02779 954 aa16■□□□□ 0.15
CIRBP-228ENST00000590347 CBWD6Q4V339 395 aa16■□□□□ 0.15
CIRBP-228ENST00000590347 CBWD3Q5JTY5 395 aa16■□□□□ 0.15
CIRBP-228ENST00000590347 CBWD5Q5RIA9 395 aa16■□□□□ 0.15
CIRBP-228ENST00000590347 TCP10LQ8TDR4 215 aa16■□□□□ 0.15
CIRBP-228ENST00000590347 GDPD5Q8WTR4 605 aa16■□□□□ 0.15
CIRBP-228ENST00000590347 CSRNP1Q96S65 589 aa16■□□□□ 0.15
CIRBP-228ENST00000590347 ARHGEF4Q9NR80 690 aa16■□□□□ 0.15
CIRBP-228ENST00000590347 LZTS1Q9Y250 596 aa16■□□□□ 0.15
CIRBP-228ENST00000590347 EFR3BQ9Y2G0 817 aa16■□□□□ 0.15
CIRBP-228ENST00000590347 NEU2Q9Y3R4 380 aa16■□□□□ 0.15
CIRBP-228ENST00000590347 COL1A1P02452 1464 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms