RNA–Protein interactions for RNA: ENST00000590049.5

CAPNS1-209, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5

Gene CAPNS1, Length 592 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-209ENST00000590049 POLR3CQ9BUI4 534 aaPredicted RBP12.67□□□□□ -0.38
CAPNS1-209ENST00000590049 APOL6Q9BWW8 343 aa12.67□□□□□ -0.38
CAPNS1-209ENST00000590049 SLC4A5Q9BY07 1137 aa12.67□□□□□ -0.38
CAPNS1-209ENST00000590049 LRRC27Q9C0I9 530 aa12.67□□□□□ -0.38
CAPNS1-209ENST00000590049 TNMDQ9H2S6 317 aa12.67□□□□□ -0.38
CAPNS1-209ENST00000590049 MAGEF1Q9HAY2 307 aa12.67□□□□□ -0.38
CAPNS1-209ENST00000590049 ZFP14Q9HCL3 533 aa12.67□□□□□ -0.38
CAPNS1-209ENST00000590049 STK17AQ9UEE5 414 aa12.67□□□□□ -0.38
CAPNS1-209ENST00000590049 INPP5FQ9Y2H2 1132 aa12.67□□□□□ -0.38
CAPNS1-209ENST00000590049 FAN1Q9Y2M0 1017 aa12.67□□□□□ -0.38
CAPNS1-209ENST00000590049 MRPS23Q9Y3D9 190 aaKnown RBP12.67□□□□□ -0.38
CAPNS1-209ENST00000590049 EML5Q05BV3 1969 aa12.67□□□□□ -0.38
CAPNS1-209ENST00000590049 EML1O00423 815 aa12.66□□□□□ -0.38
CAPNS1-209ENST00000590049 CCL16O15467 120 aa12.66□□□□□ -0.38
CAPNS1-209ENST00000590049 RRP8O43159 456 aaKnown RBP12.66□□□□□ -0.38
CAPNS1-209ENST00000590049 OPHN1O60890 802 aa12.66□□□□□ -0.38
CAPNS1-209ENST00000590049 LETM1O95202 739 aaPredicted RBP12.66□□□□□ -0.38
CAPNS1-209ENST00000590049 PSMC3P17980 439 aa12.66□□□□□ -0.38
CAPNS1-209ENST00000590049 FCARP24071 287 aa12.66□□□□□ -0.38
CAPNS1-209ENST00000590049 HOXA9P31269 272 aa12.66□□□□□ -0.38
CAPNS1-209ENST00000590049 QARSP47897 775 aaKnown RBP12.66□□□□□ -0.38
CAPNS1-209ENST00000590049 PSMC5P62195 406 aa12.66□□□□□ -0.38
CAPNS1-209ENST00000590049 DSG1Q02413 1049 aa12.66□□□□□ -0.38
CAPNS1-209ENST00000590049 CTTNQ14247 550 aaKnown RBP12.66□□□□□ -0.38
CAPNS1-209ENST00000590049 MAPK6Q16659 721 aa12.66□□□□□ -0.38
CAPNS1-209ENST00000590049 KRTAP21-3Q3LHN1 58 aa12.66□□□□□ -0.38
CAPNS1-209ENST00000590049 KRBA2Q6ZNG9 492 aa12.66□□□□□ -0.38
CAPNS1-209ENST00000590049 GLYCTKQ8IVS8 523 aa12.66□□□□□ -0.38
CAPNS1-209ENST00000590049 ENGASEQ8NFI3 743 aa12.66□□□□□ -0.38
CAPNS1-209ENST00000590049 FAM200AQ8TCP9 573 aa12.66□□□□□ -0.38
CAPNS1-209ENST00000590049 PIGKQ92643 395 aa12.66□□□□□ -0.38
CAPNS1-209ENST00000590049 LXNQ9BS40 222 aa12.66□□□□□ -0.38
CAPNS1-209ENST00000590049 TRIM4Q9C037 500 aa12.66□□□□□ -0.38
CAPNS1-209ENST00000590049 C8orf33Q9H7E9 229 aaPredicted RBP12.66□□□□□ -0.38
CAPNS1-209ENST00000590049 ZSWIM4Q9H7M6 989 aa12.66□□□□□ -0.38
CAPNS1-209ENST00000590049 ZNF302Q9NR11 478 aa12.66□□□□□ -0.38
CAPNS1-209ENST00000590049 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.66□□□□□ -0.38
CAPNS1-209ENST00000590049 SERTAD1Q9UHV2 236 aa12.66□□□□□ -0.38
CAPNS1-209ENST00000590049 MBD1Q9UIS9 605 aaPredicted RBP12.66□□□□□ -0.38
CAPNS1-209ENST00000590049 KIAA1024Q9UPX6 916 aa12.66□□□□□ -0.38
CAPNS1-209ENST00000590049 DNM3Q9UQ16 869 aa12.66□□□□□ -0.38
CAPNS1-209ENST00000590049 USP9YO00507 2555 aaPredicted RBP12.65□□□□□ -0.38
CAPNS1-209ENST00000590049 ZNF263O14978 683 aa12.65□□□□□ -0.38
CAPNS1-209ENST00000590049 B4GALT3O60512 393 aa12.65□□□□□ -0.38
CAPNS1-209ENST00000590049 ATG13O75143 517 aa12.65□□□□□ -0.38
CAPNS1-209ENST00000590049 MED24O75448 989 aa12.65□□□□□ -0.38
CAPNS1-209ENST00000590049 SLFN14P0C7P3 912 aa12.65□□□□□ -0.38
CAPNS1-209ENST00000590049 KLRC1P26715 233 aa12.65□□□□□ -0.38
CAPNS1-209ENST00000590049 ADSSP30520 456 aa12.65□□□□□ -0.38
CAPNS1-209ENST00000590049 RHDQ02161 417 aa12.65□□□□□ -0.38
CAPNS1-209ENST00000590049 CCINQ13939 588 aa12.65□□□□□ -0.38
CAPNS1-209ENST00000590049 HYIQ5T013 277 aa12.65□□□□□ -0.38
CAPNS1-209ENST00000590049 B3GNT9Q6UX72 402 aa12.65□□□□□ -0.38
CAPNS1-209ENST00000590049 SV2BQ7L1I2 683 aa12.65□□□□□ -0.38
CAPNS1-209ENST00000590049 OTUD6AQ7L8S5 288 aa12.65□□□□□ -0.38
CAPNS1-209ENST00000590049 CATSPER3Q86XQ3 398 aa12.65□□□□□ -0.38
CAPNS1-209ENST00000590049 CKAP2LQ8IYA6 745 aa12.65□□□□□ -0.38
CAPNS1-209ENST00000590049 PDCD7Q8N8D1 485 aaKnown RBP12.65□□□□□ -0.38
CAPNS1-209ENST00000590049 CSGALNACT1Q8TDX6 532 aa12.65□□□□□ -0.38
CAPNS1-209ENST00000590049 LARP4BQ92615 738 aaKnown RBP12.65□□□□□ -0.38
CAPNS1-209ENST00000590049 NACC1Q96RE7 527 aa12.65□□□□□ -0.38
CAPNS1-209ENST00000590049 TMEM175Q9BSA9 504 aa12.65□□□□□ -0.38
CAPNS1-209ENST00000590049 MMTAG2Q9BU76 263 aaKnown RBP12.65□□□□□ -0.38
CAPNS1-209ENST00000590049 CLSTN2Q9H4D0 955 aa12.65□□□□□ -0.38
CAPNS1-209ENST00000590049 BMP2KQ9NSY1 1161 aaPredicted RBP12.65□□□□□ -0.38
CAPNS1-209ENST00000590049 RGL1Q9NZL6 768 aa12.65□□□□□ -0.38
CAPNS1-209ENST00000590049 FNIP2Q9P278 1114 aa12.65□□□□□ -0.38
CAPNS1-209ENST00000590049 GABBR1Q9UBS5 961 aa12.65□□□□□ -0.38
CAPNS1-209ENST00000590049 FBXW11Q9UKB1 542 aa12.65□□□□□ -0.38
CAPNS1-209ENST00000590049 ATG2BQ96BY7 2078 aa12.65□□□□□ -0.39
CAPNS1-209ENST00000590049 PTPRBP23467 1997 aa12.64□□□□□ -0.39
CAPNS1-209ENST00000590049 GPR32O75388 356 aa12.64□□□□□ -0.39
CAPNS1-209ENST00000590049 CCNE2O96020 404 aa12.64□□□□□ -0.39
CAPNS1-209ENST00000590049 POU2F2P09086 479 aa12.64□□□□□ -0.39
CAPNS1-209ENST00000590049 CD59P13987 128 aa12.64□□□□□ -0.39
CAPNS1-209ENST00000590049 POU3F2P20265 443 aaPredicted RBP12.64□□□□□ -0.39
CAPNS1-209ENST00000590049 KPNA1P52294 538 aaPredicted RBP12.64□□□□□ -0.39
CAPNS1-209ENST00000590049 UBAP2LQ14157 1087 aaKnown RBP12.64□□□□□ -0.39
CAPNS1-209ENST00000590049 LY6DQ14210 128 aa12.64□□□□□ -0.39
CAPNS1-209ENST00000590049 DHX8Q14562 1220 aaKnown RBP12.64□□□□□ -0.39
CAPNS1-209ENST00000590049 CAMK4Q16566 473 aa12.64□□□□□ -0.39
CAPNS1-209ENST00000590049 LONRF3Q496Y0 759 aa12.64□□□□□ -0.39
CAPNS1-209ENST00000590049 TMEM119Q4V9L6 283 aa12.64□□□□□ -0.39
CAPNS1-209ENST00000590049 SWSAP1Q6NVH7 229 aa12.64□□□□□ -0.39
CAPNS1-209ENST00000590049 ABHD15Q6UXT9 468 aa12.64□□□□□ -0.39
CAPNS1-209ENST00000590049 CCDC47Q96A33 483 aaKnown RBP12.64□□□□□ -0.39
CAPNS1-209ENST00000590049 CAMK1GQ96NX5 476 aa12.64□□□□□ -0.39
CAPNS1-209ENST00000590049 PNMA5Q96PV4 448 aa12.64□□□□□ -0.39
CAPNS1-209ENST00000590049 HSD17B14Q9BPX1 270 aa12.64□□□□□ -0.39
CAPNS1-209ENST00000590049 HCFC1R1Q9NWW0 138 aa12.64□□□□□ -0.39
CAPNS1-209ENST00000590049 POLQO75417 2590 aa12.63□□□□□ -0.39
CAPNS1-209ENST00000590049 A0A087X0B3 334 aa12.63□□□□□ -0.39
CAPNS1-209ENST00000590049 NRP1O14786 923 aa12.63□□□□□ -0.39
CAPNS1-209ENST00000590049 ACTN4O43707 911 aaKnown RBP12.63□□□□□ -0.39
CAPNS1-209ENST00000590049 ZNF862O60290 1169 aa12.63□□□□□ -0.39
CAPNS1-209ENST00000590049 SLITRK3O94933 977 aa12.63□□□□□ -0.39
CAPNS1-209ENST00000590049 SMC2O95347 1197 aa12.63□□□□□ -0.39
CAPNS1-209ENST00000590049 ATG7O95352 703 aa12.63□□□□□ -0.39
CAPNS1-209ENST00000590049 KRT18P05783 430 aaKnown RBP12.63□□□□□ -0.39
CAPNS1-209ENST00000590049 C8AP07357 584 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms