RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 TCEAL5Q5H9L2 206 aa22.85■■□□□ 1.25
R3HDM4-204ENST00000589428 CD300LGQ6UXG3 332 aa22.85■■□□□ 1.25
R3HDM4-204ENST00000589428 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.85■■□□□ 1.25
R3HDM4-204ENST00000589428 C15orf39Q6ZRI6 1047 aa22.85■■□□□ 1.25
R3HDM4-204ENST00000589428 SV2AQ7L0J3 742 aa22.85■■□□□ 1.25
R3HDM4-204ENST00000589428 TAS1R1Q7RTX1 841 aa22.85■■□□□ 1.25
R3HDM4-204ENST00000589428 C1orf127Q8N9H9 656 aa22.85■■□□□ 1.25
R3HDM4-204ENST00000589428 OR5B17Q8NGF7 314 aa22.85■■□□□ 1.25
R3HDM4-204ENST00000589428 I3L4J1 428 aa22.85■■□□□ 1.25
R3HDM4-204ENST00000589428 PIRO00625 290 aa22.85■■□□□ 1.25
R3HDM4-204ENST00000589428 C2CD2LO14523 706 aa22.85■■□□□ 1.25
R3HDM4-204ENST00000589428 PPEF2O14830 753 aa22.85■■□□□ 1.25
R3HDM4-204ENST00000589428 PMM2O15305 246 aa22.85■■□□□ 1.25
R3HDM4-204ENST00000589428 KRT19P08727 400 aa22.85■■□□□ 1.25
R3HDM4-204ENST00000589428 PAX3P23760 479 aa22.85■■□□□ 1.25
R3HDM4-204ENST00000589428 POLR2BP30876 1174 aaKnown RBP22.85■■□□□ 1.25
R3HDM4-204ENST00000589428 DSG1Q02413 1049 aa22.85■■□□□ 1.25
R3HDM4-204ENST00000589428 EXOC3L4Q17RC7 722 aa22.85■■□□□ 1.25
R3HDM4-204ENST00000589428 KRT39Q6A163 491 aa22.85■■□□□ 1.25
R3HDM4-204ENST00000589428 GBP6Q6ZN66 633 aa22.85■■□□□ 1.25
R3HDM4-204ENST00000589428 CEP57Q86XR8 500 aa22.85■■□□□ 1.25
R3HDM4-204ENST00000589428 MRPL43Q8N983 215 aaKnown RBP22.85■■□□□ 1.25
R3HDM4-204ENST00000589428 B3GALT6Q96L58 329 aa22.85■■□□□ 1.25
R3HDM4-204ENST00000589428 TTPALQ9BTX7 342 aa22.85■■□□□ 1.25
R3HDM4-204ENST00000589428 CHST7Q9NS84 486 aa22.85■■□□□ 1.25
R3HDM4-204ENST00000589428 IRAK3Q9Y616 596 aa22.85■■□□□ 1.25
R3HDM4-204ENST00000589428 MYO7AQ13402 2215 aa22.84■■□□□ 1.25
R3HDM4-204ENST00000589428 C2orf71A6NGG8 1288 aa22.84■■□□□ 1.25
R3HDM4-204ENST00000589428 HIDE1A8MVS5 230 aa22.84■■□□□ 1.25
R3HDM4-204ENST00000589428 P4HA2O15460 535 aa22.84■■□□□ 1.25
R3HDM4-204ENST00000589428 DEKP35659 375 aaKnown RBP22.84■■□□□ 1.25
R3HDM4-204ENST00000589428 PNPLA4P41247 253 aa22.84■■□□□ 1.25
R3HDM4-204ENST00000589428 AP3M2P53677 418 aa22.84■■□□□ 1.25
R3HDM4-204ENST00000589428 TBX2Q13207 712 aaPredicted RBP22.84■■□□□ 1.25
R3HDM4-204ENST00000589428 ZACNQ401N2 412 aa22.84■■□□□ 1.25
R3HDM4-204ENST00000589428 TDRD10Q5VZ19 366 aaKnown RBP22.84■■□□□ 1.25
R3HDM4-204ENST00000589428 ADGRD2Q7Z7M1 963 aa22.84■■□□□ 1.25
R3HDM4-204ENST00000589428 RIN2Q8WYP3 895 aaPredicted RBP22.84■■□□□ 1.25
R3HDM4-204ENST00000589428 SUSD3Q96L08 255 aa22.84■■□□□ 1.25
R3HDM4-204ENST00000589428 TLE6Q9H808 572 aa22.84■■□□□ 1.25
R3HDM4-204ENST00000589428 AGAP1Q9UPQ3 857 aa22.84■■□□□ 1.25
R3HDM4-204ENST00000589428 C4BPAP04003 597 aaKnown RBP22.83■■□□□ 1.25
R3HDM4-204ENST00000589428 PON1P27169 355 aa22.83■■□□□ 1.25
R3HDM4-204ENST00000589428 TAF6P49848 677 aa22.83■■□□□ 1.25
R3HDM4-204ENST00000589428 RBP5P82980 135 aa22.83■■□□□ 1.25
R3HDM4-204ENST00000589428 APBA1Q02410 837 aa22.83■■□□□ 1.25
R3HDM4-204ENST00000589428 SKIV2LQ15477 1246 aaKnown RBP22.83■■□□□ 1.25
R3HDM4-204ENST00000589428 RTP2Q5QGT7 225 aa22.83■■□□□ 1.25
R3HDM4-204ENST00000589428 PDXDC1Q6P996 788 aa22.83■■□□□ 1.25
R3HDM4-204ENST00000589428 PCMTD1Q96MG8 357 aaPredicted RBP22.83■■□□□ 1.25
R3HDM4-204ENST00000589428 LSM14BQ9BX40 385 aaKnown RBP22.83■■□□□ 1.25
R3HDM4-204ENST00000589428 FAM207AQ9NSI2 230 aaPredicted RBP22.83■■□□□ 1.25
R3HDM4-204ENST00000589428 SYN3O14994 580 aa22.82■■□□□ 1.24
R3HDM4-204ENST00000589428 EPHB6O15197 1021 aa22.82■■□□□ 1.24
R3HDM4-204ENST00000589428 SLC9A1P19634 815 aa22.82■■□□□ 1.24
R3HDM4-204ENST00000589428 TKTP29401 623 aaKnown RBP22.82■■□□□ 1.24
R3HDM4-204ENST00000589428 NRIP1P48552 1158 aa22.82■■□□□ 1.24
R3HDM4-204ENST00000589428 AARSP49588 968 aaKnown RBP eCLIP22.82■■□□□ 1.245e-6■■■■■ 34.4
R3HDM4-204ENST00000589428 LILRA4P59901 499 aa22.82■■□□□ 1.24
R3HDM4-204ENST00000589428 CREMQ03060 361 aa22.82■■□□□ 1.24
R3HDM4-204ENST00000589428 SV2CQ496J9 727 aa22.82■■□□□ 1.24
R3HDM4-204ENST00000589428 KIAA0319Q5VV43 1072 aa22.82■■□□□ 1.24
R3HDM4-204ENST00000589428 DPY19L2P1Q6NXN4 242 aa22.82■■□□□ 1.24
R3HDM4-204ENST00000589428 DSTYKQ6XUX3 929 aa22.82■■□□□ 1.24
R3HDM4-204ENST00000589428 TRAPPC11Q7Z392 1133 aa22.82■■□□□ 1.24
R3HDM4-204ENST00000589428 RBM23Q86U06 439 aaKnown RBP22.82■■□□□ 1.24
R3HDM4-204ENST00000589428 GPR65Q8IYL9 337 aa22.82■■□□□ 1.24
R3HDM4-204ENST00000589428 LRRC52Q8N7C0 313 aa22.82■■□□□ 1.24
R3HDM4-204ENST00000589428 LMO3Q8TAP4 145 aa22.82■■□□□ 1.24
R3HDM4-204ENST00000589428 TAS1R2Q8TE23 839 aa22.82■■□□□ 1.24
R3HDM4-204ENST00000589428 EMILIN2Q9BXX0 1053 aa22.82■■□□□ 1.24
R3HDM4-204ENST00000589428 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.82■■□□□ 1.241e-7■■□□□ 13.4
R3HDM4-204ENST00000589428 COQ4Q9Y3A0 265 aa22.82■■□□□ 1.24
R3HDM4-204ENST00000589428 LRRN2O75325 713 aa22.82■■□□□ 1.24
R3HDM4-204ENST00000589428 GYPCP04921 128 aa22.82■■□□□ 1.24
R3HDM4-204ENST00000589428 FGFR3P22607 806 aa22.82■■□□□ 1.24
R3HDM4-204ENST00000589428 BIRC3Q13489 604 aa22.82■■□□□ 1.24
R3HDM4-204ENST00000589428 TRIM65Q6PJ69 517 aa22.82■■□□□ 1.24
R3HDM4-204ENST00000589428 PIK3R5Q8WYR1 880 aa22.82■■□□□ 1.24
R3HDM4-204ENST00000589428 SEMA4DQ92854 862 aa22.82■■□□□ 1.24
R3HDM4-204ENST00000589428 CDCA3Q99618 268 aaPredicted RBP22.82■■□□□ 1.24
R3HDM4-204ENST00000589428 TTYH3Q9C0H2 523 aa22.82■■□□□ 1.24
R3HDM4-204ENST00000589428 INTS2Q9H0H0 1204 aaKnown RBP22.82■■□□□ 1.24
R3HDM4-204ENST00000589428 IMPACTQ9P2X3 320 aa22.82■■□□□ 1.24
R3HDM4-204ENST00000589428 ARHGEF37A1IGU5 675 aa22.81■■□□□ 1.24
R3HDM4-204ENST00000589428 PHACTR2O75167 634 aa22.81■■□□□ 1.24
R3HDM4-204ENST00000589428 CETN1Q12798 172 aa22.81■■□□□ 1.24
R3HDM4-204ENST00000589428 PSMD5Q16401 504 aa22.81■■□□□ 1.24
R3HDM4-204ENST00000589428 FBXL13Q8NEE6 735 aa22.81■■□□□ 1.24
R3HDM4-204ENST00000589428 APPL2Q8NEU8 664 aa22.81■■□□□ 1.24
R3HDM4-204ENST00000589428 IGFLR1Q9H665 355 aa22.81■■□□□ 1.24
R3HDM4-204ENST00000589428 SIX2Q9NPC8 291 aa22.81■■□□□ 1.24
R3HDM4-204ENST00000589428 SIX4Q9UIU6 781 aa22.81■■□□□ 1.24
R3HDM4-204ENST00000589428 PCDHB8Q9UN66 801 aa22.81■■□□□ 1.24
R3HDM4-204ENST00000589428 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.81■■□□□ 1.245e-7■■■■□ 19.7
R3HDM4-204ENST00000589428 M0QZQ0 153 aa22.8■■□□□ 1.24
R3HDM4-204ENST00000589428 NOL4O94818 638 aa22.8■■□□□ 1.24
R3HDM4-204ENST00000589428 VNN1O95497 513 aa22.8■■□□□ 1.24
R3HDM4-204ENST00000589428 ODC1P11926 461 aa22.8■■□□□ 1.24
R3HDM4-204ENST00000589428 TRIM21P19474 475 aaKnown RBP22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms