RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 C11orf84Q9BUA3 381 aaPredicted RBP18.17■□□□□ 0.5
SCAMP4-211ENST00000588907 PBX4Q9BYU1 374 aa18.17■□□□□ 0.5
SCAMP4-211ENST00000588907 GANQ9H2C0 597 aa18.17■□□□□ 0.5
SCAMP4-211ENST00000588907 APOBEC3GQ9HC16 384 aaKnown RBP18.17■□□□□ 0.5
SCAMP4-211ENST00000588907 SIX2Q9NPC8 291 aa18.17■□□□□ 0.5
SCAMP4-211ENST00000588907 HCSTQ9UBK5 93 aa18.17■□□□□ 0.5
SCAMP4-211ENST00000588907 CACNG4Q9UBN1 327 aa18.17■□□□□ 0.5
SCAMP4-211ENST00000588907 PUF60Q9UHX1 559 aaKnown RBP18.17■□□□□ 0.5
SCAMP4-211ENST00000588907 LZTS1Q9Y250 596 aa18.17■□□□□ 0.5
SCAMP4-211ENST00000588907 SSX2IPQ9Y2D8 614 aa18.17■□□□□ 0.5
SCAMP4-211ENST00000588907 GBF1Q92538 1859 aa18.17■□□□□ 0.5
SCAMP4-211ENST00000588907 NLRC5Q86WI3 1866 aa18.16■□□□□ 0.5
SCAMP4-211ENST00000588907 LCHNA4D1U4 455 aa18.16■□□□□ 0.5
SCAMP4-211ENST00000588907 SPTLC1O15269 473 aa18.16■□□□□ 0.5
SCAMP4-211ENST00000588907 LINC00271P0C7V0 271 aa18.16■□□□□ 0.5
SCAMP4-211ENST00000588907 LHX1P48742 406 aa18.16■□□□□ 0.5
SCAMP4-211ENST00000588907 LRMPQ12912 555 aa18.16■□□□□ 0.5
SCAMP4-211ENST00000588907 LRIT3Q3SXY7 679 aa18.16■□□□□ 0.5
SCAMP4-211ENST00000588907 TIGD5Q53EQ6 642 aa18.16■□□□□ 0.5
SCAMP4-211ENST00000588907 SPOPLQ6IQ16 392 aa18.16■□□□□ 0.5
SCAMP4-211ENST00000588907 LIMS2Q7Z4I7 341 aa18.16■□□□□ 0.5
SCAMP4-211ENST00000588907 DDX53Q86TM3 631 aaKnown RBP18.16■□□□□ 0.5
SCAMP4-211ENST00000588907 PPFIBP1Q86W92 1011 aa18.16■□□□□ 0.5
SCAMP4-211ENST00000588907 HASPINQ8TF76 798 aa18.16■□□□□ 0.5
SCAMP4-211ENST00000588907 STK33Q9BYT3 514 aa18.16■□□□□ 0.5
SCAMP4-211ENST00000588907 UBE2TQ9NPD8 197 aaPredicted RBP18.16■□□□□ 0.5
SCAMP4-211ENST00000588907 IMPACTQ9P2X3 320 aa18.16■□□□□ 0.5
SCAMP4-211ENST00000588907 GRXCR1A8MXD5 290 aa18.15■□□□□ 0.5
SCAMP4-211ENST00000588907 FGF18O76093 207 aa18.15■□□□□ 0.5
SCAMP4-211ENST00000588907 SOD2P04179 222 aa18.15■□□□□ 0.5
SCAMP4-211ENST00000588907 ITGB1P05556 798 aa18.15■□□□□ 0.5
SCAMP4-211ENST00000588907 CCDC172P0C7W6 258 aa18.15■□□□□ 0.5
SCAMP4-211ENST00000588907 POLR2FP61218 127 aaKnown RBP18.15■□□□□ 0.5
SCAMP4-211ENST00000588907 ERVK-21P61565 698 aa18.15■□□□□ 0.5
SCAMP4-211ENST00000588907 CREMQ03060 361 aa18.15■□□□□ 0.5
SCAMP4-211ENST00000588907 INCA1Q0VD86 236 aa18.15■□□□□ 0.5
SCAMP4-211ENST00000588907 USP41Q3LFD5 358 aa18.15■□□□□ 0.5
SCAMP4-211ENST00000588907 PPP2R2DQ66LE6 453 aa18.15■□□□□ 0.5
SCAMP4-211ENST00000588907 CD300LGQ6UXG3 332 aa18.15■□□□□ 0.5
SCAMP4-211ENST00000588907 UNC93AQ86WB7 457 aa18.15■□□□□ 0.5
SCAMP4-211ENST00000588907 ADGRF2Q8IZF7 708 aa18.15■□□□□ 0.5
SCAMP4-211ENST00000588907 RABGGTAQ92696 567 aa18.15■□□□□ 0.5
SCAMP4-211ENST00000588907 TATDN2Q93075 761 aa18.15■□□□□ 0.5
SCAMP4-211ENST00000588907 SPAG5Q96R06 1193 aa18.15■□□□□ 0.5
SCAMP4-211ENST00000588907 NAA15Q9BXJ9 866 aaKnown RBP18.15■□□□□ 0.5
SCAMP4-211ENST00000588907 SLC28A3Q9HAS3 691 aa18.15■□□□□ 0.5
SCAMP4-211ENST00000588907 DNAJC12Q9UKB3 198 aa18.15■□□□□ 0.5
SCAMP4-211ENST00000588907 NT5C1B-RDH14C9J2C7 533 aa18.14■□□□□ 0.49
SCAMP4-211ENST00000588907 H7C4K7 107 aa18.14■□□□□ 0.49
SCAMP4-211ENST00000588907 NOL4O94818 638 aa18.14■□□□□ 0.49
SCAMP4-211ENST00000588907 EFEMP2O95967 443 aa18.14■□□□□ 0.49
SCAMP4-211ENST00000588907 WARSP23381 471 aaKnown RBP18.14■□□□□ 0.49
SCAMP4-211ENST00000588907 PBX3P40426 434 aa18.14■□□□□ 0.49
SCAMP4-211ENST00000588907 BRCC3P46736 316 aa18.14■□□□□ 0.49
SCAMP4-211ENST00000588907 KLK7P49862 253 aa18.14■□□□□ 0.49
SCAMP4-211ENST00000588907 YWHAHQ04917 246 aaPredicted RBP18.14■□□□□ 0.49
SCAMP4-211ENST00000588907 RAPGEF1Q13905 1077 aa18.14■□□□□ 0.49
SCAMP4-211ENST00000588907 SOWAHAQ2M3V2 549 aa18.14■□□□□ 0.49
SCAMP4-211ENST00000588907 FAM171A1Q5VUB5 890 aa18.14■□□□□ 0.49
SCAMP4-211ENST00000588907 IQCEQ6IPM2 695 aa18.14■□□□□ 0.49
SCAMP4-211ENST00000588907 DPY19L2P1Q6NXN4 242 aa18.14■□□□□ 0.49
SCAMP4-211ENST00000588907 SCARA5Q6ZMJ2 495 aa18.14■□□□□ 0.49
SCAMP4-211ENST00000588907 ANKS3Q6ZW76 656 aa18.14■□□□□ 0.49
SCAMP4-211ENST00000588907 RRAGAQ7L523 313 aa18.14■□□□□ 0.49
SCAMP4-211ENST00000588907 TMC6Q7Z403 805 aa18.14■□□□□ 0.49
SCAMP4-211ENST00000588907 CNGA4Q8IV77 575 aa18.14■□□□□ 0.49
SCAMP4-211ENST00000588907 ARHGEF19Q8IW93 802 aa18.14■□□□□ 0.49
SCAMP4-211ENST00000588907 DRC7Q8IY82 874 aa18.14■□□□□ 0.49
SCAMP4-211ENST00000588907 RNF168Q8IYW5 571 aaPredicted RBP18.14■□□□□ 0.49
SCAMP4-211ENST00000588907 THEM5Q8N1Q8 247 aa18.14■□□□□ 0.49
SCAMP4-211ENST00000588907 TMEM130Q8N3G9 435 aa18.14■□□□□ 0.49
SCAMP4-211ENST00000588907 PDCL2Q8N4E4 241 aa18.14■□□□□ 0.49
SCAMP4-211ENST00000588907 TIFAQ96CG3 184 aa18.14■□□□□ 0.49
SCAMP4-211ENST00000588907 TTPALQ9BTX7 342 aa18.14■□□□□ 0.49
SCAMP4-211ENST00000588907 HERC2P3Q9BVR0 1158 aa18.14■□□□□ 0.49
SCAMP4-211ENST00000588907 TTYH3Q9C0H2 523 aa18.14■□□□□ 0.49
SCAMP4-211ENST00000588907 SNX25Q9H3E2 840 aa18.14■□□□□ 0.49
SCAMP4-211ENST00000588907 CISHQ9NSE2 258 aa18.14■□□□□ 0.49
SCAMP4-211ENST00000588907 BARX2Q9UMQ3 279 aaPredicted RBP18.14■□□□□ 0.49
SCAMP4-211ENST00000588907 POLIQ9UNA4 740 aa18.14■□□□□ 0.49
SCAMP4-211ENST00000588907 YBX2Q9Y2T7 364 aaKnown RBP18.14■□□□□ 0.49
SCAMP4-211ENST00000588907 LUC7L2Q9Y383 392 aaKnown RBP18.14■□□□□ 0.49
SCAMP4-211ENST00000588907 FHOD1Q9Y613 1164 aa18.14■□□□□ 0.49
SCAMP4-211ENST00000588907 LAMA2P24043 3122 aaKnown RBP18.14■□□□□ 0.49
SCAMP4-211ENST00000588907 TMEM265A0A087WTH1 108 aa18.13■□□□□ 0.49
SCAMP4-211ENST00000588907 OAZ2O95190 189 aa18.13■□□□□ 0.49
SCAMP4-211ENST00000588907 FGFR3P22607 806 aa18.13■□□□□ 0.49
SCAMP4-211ENST00000588907 DNAJB2P25686 324 aa18.13■□□□□ 0.49
SCAMP4-211ENST00000588907 PCSK1P29120 753 aa18.13■□□□□ 0.49
SCAMP4-211ENST00000588907 TAP1Q03518 808 aa18.13■□□□□ 0.49
SCAMP4-211ENST00000588907 SCARA3Q6AZY7 606 aa18.13■□□□□ 0.49
SCAMP4-211ENST00000588907 OVOS1Q6IE37 1185 aa18.13■□□□□ 0.49
SCAMP4-211ENST00000588907 KIAA1841Q6NSI8 718 aa18.13■□□□□ 0.49
SCAMP4-211ENST00000588907 TMEM173Q86WV6 379 aaPredicted RBP18.13■□□□□ 0.49
SCAMP4-211ENST00000588907 KLHL23Q8NBE8 558 aa18.13■□□□□ 0.49
SCAMP4-211ENST00000588907 SHC3Q92529 594 aa18.13■□□□□ 0.49
SCAMP4-211ENST00000588907 TNIP3Q96KP6 325 aa18.13■□□□□ 0.49
SCAMP4-211ENST00000588907 GPR62Q9BZJ7 368 aa18.13■□□□□ 0.49
SCAMP4-211ENST00000588907 SMYD3Q9H7B4 428 aa18.13■□□□□ 0.49
SCAMP4-211ENST00000588907 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.13■□□□□ 0.492e-7■■■■■ 67.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms