RNA–Protein interactions for RNA: ENST00000588905.5

GCDH-208, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-208ENST00000588905 ARHGEF37A1IGU5 675 aa16.71■□□□□ 0.27
GCDH-208ENST00000588905 WDR27A2RRH5 827 aa16.71■□□□□ 0.27
GCDH-208ENST00000588905 SPTLC1O15269 473 aa16.71■□□□□ 0.27
GCDH-208ENST00000588905 CCL16O15467 120 aa16.71■□□□□ 0.27
GCDH-208ENST00000588905 ATF2P15336 505 aa16.71■□□□□ 0.27
GCDH-208ENST00000588905 TFAMQ00059 246 aaKnown RBP16.71■□□□□ 0.27
GCDH-208ENST00000588905 TPGS2Q68CL5 300 aa16.71■□□□□ 0.27
GCDH-208ENST00000588905 SCARA3Q6AZY7 606 aa16.71■□□□□ 0.27
GCDH-208ENST00000588905 XXYLT1Q8NBI6 393 aa16.71■□□□□ 0.27
GCDH-208ENST00000588905 RDH13Q8NBN7 331 aa16.71■□□□□ 0.27
GCDH-208ENST00000588905 CACTINQ8WUQ7 758 aaKnown RBP16.71■□□□□ 0.27
GCDH-208ENST00000588905 CCDC34Q96HJ3 373 aa16.71■□□□□ 0.27
GCDH-208ENST00000588905 FAM84AQ96KN4 292 aa16.71■□□□□ 0.27
GCDH-208ENST00000588905 KCNH6Q9H252 994 aa16.71■□□□□ 0.27
GCDH-208ENST00000588905 DMAC2Q9NW81 257 aa16.71■□□□□ 0.27
GCDH-208ENST00000588905 MAFFQ9ULX9 164 aa16.71■□□□□ 0.27
GCDH-208ENST00000588905 ODC1P11926 461 aa16.7■□□□□ 0.26
GCDH-208ENST00000588905 GBP2P32456 591 aaPredicted RBP16.7■□□□□ 0.26
GCDH-208ENST00000588905 TAF6P49848 677 aa16.7■□□□□ 0.26
GCDH-208ENST00000588905 MRE11P49959 708 aa16.7■□□□□ 0.26
GCDH-208ENST00000588905 VCPP55072 806 aaKnown RBP16.7■□□□□ 0.26
GCDH-208ENST00000588905 GRASPQ7Z6J2 395 aaPredicted RBP16.7■□□□□ 0.26
GCDH-208ENST00000588905 TCEAL8Q8IYN2 117 aa16.7■□□□□ 0.26
GCDH-208ENST00000588905 SPATA20Q8TB22 786 aa16.7■□□□□ 0.26
GCDH-208ENST00000588905 GOLGA5Q8TBA6 731 aa16.7■□□□□ 0.26
GCDH-208ENST00000588905 ERCC4Q92889 916 aaPredicted RBP16.7■□□□□ 0.26
GCDH-208ENST00000588905 SMOC2Q9H3U7 446 aa16.7■□□□□ 0.26
GCDH-208ENST00000588905 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.7■□□□□ 0.26
GCDH-208ENST00000588905 AFF4Q9UHB7 1163 aaKnown RBP16.7■□□□□ 0.26
GCDH-208ENST00000588905 POLIQ9UNA4 740 aa16.7■□□□□ 0.26
GCDH-208ENST00000588905 SORCS3Q9UPU3 1222 aa16.7■□□□□ 0.26
GCDH-208ENST00000588905 MAPK8IP1Q9UQF2 711 aa16.7■□□□□ 0.26
GCDH-208ENST00000588905 OR6C75A6NL08 312 aa16.69■□□□□ 0.26
GCDH-208ENST00000588905 PDXKO00764 312 aa16.69■□□□□ 0.26
GCDH-208ENST00000588905 PRRG1O14668 218 aa16.69■□□□□ 0.26
GCDH-208ENST00000588905 N4BP1O75113 896 aaKnown RBP16.69■□□□□ 0.26
GCDH-208ENST00000588905 PDGFBP01127 241 aaPredicted RBP16.69■□□□□ 0.26
GCDH-208ENST00000588905 ASGR2P07307 311 aa16.69■□□□□ 0.26
GCDH-208ENST00000588905 CPB1P15086 417 aa16.69■□□□□ 0.26
GCDH-208ENST00000588905 FSHRP23945 695 aa16.69■□□□□ 0.26
GCDH-208ENST00000588905 SIGLEC14Q08ET2 396 aa16.69■□□□□ 0.26
GCDH-208ENST00000588905 SURF1Q15526 300 aa16.69■□□□□ 0.26
GCDH-208ENST00000588905 SNRNP35Q16560 246 aaKnown RBP16.69■□□□□ 0.26
GCDH-208ENST00000588905 OVOS1Q6IE37 1185 aa16.69■□□□□ 0.26
GCDH-208ENST00000588905 ELOA2Q8IYF1 753 aaPredicted RBP16.69■□□□□ 0.26
GCDH-208ENST00000588905 C1orf127Q8N9H9 656 aa16.69■□□□□ 0.26
GCDH-208ENST00000588905 CXorf38Q8TB03 319 aa16.69■□□□□ 0.26
GCDH-208ENST00000588905 TMEM174Q8WUU8 243 aa16.69■□□□□ 0.26
GCDH-208ENST00000588905 BORCS6Q96GS4 357 aa16.69■□□□□ 0.26
GCDH-208ENST00000588905 MFSD14AQ96MC6 490 aa16.69■□□□□ 0.26
GCDH-208ENST00000588905 MYADMQ96S97 322 aa16.69■□□□□ 0.26
GCDH-208ENST00000588905 CYP4F11Q9HBI6 524 aa16.69■□□□□ 0.26
GCDH-208ENST00000588905 EPS15L1Q9UBC2 864 aa16.69■□□□□ 0.26
GCDH-208ENST00000588905 DSEQ9UL01 958 aa16.69■□□□□ 0.26
GCDH-208ENST00000588905 PCDHA5Q9Y5H7 936 aa16.69■□□□□ 0.26
GCDH-208ENST00000588905 PDCD11Q14690 1871 aaKnown RBP16.69■□□□□ 0.26
GCDH-208ENST00000588905 PTPRJQ12913 1337 aa16.69■□□□□ 0.26
GCDH-208ENST00000588905 CYB561D2O14569 222 aa16.68■□□□□ 0.26
GCDH-208ENST00000588905 PRPF40AO75400 957 aaKnown RBP16.68■□□□□ 0.26
GCDH-208ENST00000588905 SEC24AO95486 1093 aa16.68■□□□□ 0.26
GCDH-208ENST00000588905 LRG1P02750 347 aa16.68■□□□□ 0.26
GCDH-208ENST00000588905 CYP11A1P05108 521 aa16.68■□□□□ 0.26
GCDH-208ENST00000588905 PNPLA4P41247 253 aa16.68■□□□□ 0.26
GCDH-208ENST00000588905 CYP24A1Q07973 514 aa16.68■□□□□ 0.26
GCDH-208ENST00000588905 ADCY1Q08828 1119 aa16.68■□□□□ 0.26
GCDH-208ENST00000588905 TCF15Q12870 199 aa16.68■□□□□ 0.26
GCDH-208ENST00000588905 MTMR3Q13615 1198 aa16.68■□□□□ 0.26
GCDH-208ENST00000588905 PSMD6Q15008 389 aa16.68■□□□□ 0.26
GCDH-208ENST00000588905 SV2CQ496J9 727 aa16.68■□□□□ 0.26
GCDH-208ENST00000588905 LMBRD2Q68DH5 695 aaPredicted RBP16.68■□□□□ 0.26
GCDH-208ENST00000588905 SLC9A9Q8IVB4 645 aa16.68■□□□□ 0.26
GCDH-208ENST00000588905 UBALD2Q8IYN6 164 aa16.68■□□□□ 0.26
GCDH-208ENST00000588905 GUF1Q8N442 669 aaKnown RBP16.68■□□□□ 0.26
GCDH-208ENST00000588905 FBXL6Q8N531 539 aa16.68■□□□□ 0.26
GCDH-208ENST00000588905 CSGALNACT2Q8N6G5 542 aa16.68■□□□□ 0.26
GCDH-208ENST00000588905 OR5B17Q8NGF7 314 aa16.68■□□□□ 0.26
GCDH-208ENST00000588905 PBXIP1Q96AQ6 731 aa16.68■□□□□ 0.26
GCDH-208ENST00000588905 ZNF560Q96MR9 790 aa16.68■□□□□ 0.26
GCDH-208ENST00000588905 GSDMAQ96QA5 445 aa16.68■□□□□ 0.26
GCDH-208ENST00000588905 GZF1Q9H116 711 aaPredicted RBP16.68■□□□□ 0.26
GCDH-208ENST00000588905 INTS13Q9NVM9 706 aa16.68■□□□□ 0.26
GCDH-208ENST00000588905 IGSF9Q9P2J2 1179 aa16.68■□□□□ 0.26
GCDH-208ENST00000588905 AGAP1Q9UPQ3 857 aa16.68■□□□□ 0.26
GCDH-208ENST00000588905 USP34Q70CQ2 3546 aa16.67■□□□□ 0.26
GCDH-208ENST00000588905 KPNA7A9QM74 516 aa16.67■□□□□ 0.26
GCDH-208ENST00000588905 EXOC3O60645 756 aa16.67■□□□□ 0.26
GCDH-208ENST00000588905 KIF20AO95235 890 aa16.67■□□□□ 0.26
GCDH-208ENST00000588905 SMC2O95347 1197 aa16.67■□□□□ 0.26
GCDH-208ENST00000588905 ITGB3P05106 788 aa16.67■□□□□ 0.26
GCDH-208ENST00000588905 TMEM191BP0C7N4 346 aa16.67■□□□□ 0.26
GCDH-208ENST00000588905 POLR2BP30876 1174 aaKnown RBP16.67■□□□□ 0.26
GCDH-208ENST00000588905 UBE2HP62256 183 aa16.67■□□□□ 0.26
GCDH-208ENST00000588905 NTHL1P78549 312 aa16.67■□□□□ 0.26
GCDH-208ENST00000588905 MYBPC2Q14324 1141 aa16.67■□□□□ 0.26
GCDH-208ENST00000588905 DUOXA2Q1HG44 320 aa16.67■□□□□ 0.26
GCDH-208ENST00000588905 RNF19BQ6ZMZ0 732 aa16.67■□□□□ 0.26
GCDH-208ENST00000588905 GET4Q7L5D6 327 aaPredicted RBP16.67■□□□□ 0.26
GCDH-208ENST00000588905 METTL23Q86XA0 190 aa16.67■□□□□ 0.26
GCDH-208ENST00000588905 SMYD4Q8IYR2 804 aaPredicted RBP16.67■□□□□ 0.26
GCDH-208ENST00000588905 CCDC127Q96BQ5 260 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms