RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 UNGP13051 313 aaPredicted RBP9.35□□□□□ -0.91
SMAD4-206ENST00000588860 CYBAP13498 195 aa9.35□□□□□ -0.91
SMAD4-206ENST00000588860 DARSP14868 501 aaKnown RBP9.35□□□□□ -0.91
SMAD4-206ENST00000588860 GRM5P41594 1212 aa9.35□□□□□ -0.91
SMAD4-206ENST00000588860 ASPAP45381 313 aa9.35□□□□□ -0.91
SMAD4-206ENST00000588860 NSFP46459 744 aaKnown RBP9.35□□□□□ -0.91
SMAD4-206ENST00000588860 ZNF132P52740 706 aa9.35□□□□□ -0.91
SMAD4-206ENST00000588860 RNASE9P60153 205 aaKnown RBP9.35□□□□□ -0.91
SMAD4-206ENST00000588860 VSNL1P62760 191 aa9.35□□□□□ -0.91
SMAD4-206ENST00000588860 LACTBP83111 547 aaPredicted RBP9.35□□□□□ -0.91
SMAD4-206ENST00000588860 PURAQ00577 322 aaKnown RBP9.35□□□□□ -0.91
SMAD4-206ENST00000588860 ITIH3Q06033 890 aa9.35□□□□□ -0.91
SMAD4-206ENST00000588860 MESDQ14696 234 aa9.35□□□□□ -0.91
SMAD4-206ENST00000588860 SLC10A6Q3KNW5 377 aa9.35□□□□□ -0.91
SMAD4-206ENST00000588860 ZNF667Q5HYK9 610 aa9.35□□□□□ -0.91
SMAD4-206ENST00000588860 CC2D1AQ6P1N0 951 aaPredicted RBP9.35□□□□□ -0.91
SMAD4-206ENST00000588860 TMEM130Q8N3G9 435 aa9.35□□□□□ -0.91
SMAD4-206ENST00000588860 C7orf31Q8N865 590 aa9.35□□□□□ -0.91
SMAD4-206ENST00000588860 C1orf127Q8N9H9 656 aa9.35□□□□□ -0.91
SMAD4-206ENST00000588860 ZNF564Q8TBZ8 553 aaPredicted RBP9.35□□□□□ -0.91
SMAD4-206ENST00000588860 CPA5Q8WXQ8 436 aa9.35□□□□□ -0.91
SMAD4-206ENST00000588860 TRIB2Q92519 343 aa9.35□□□□□ -0.91
SMAD4-206ENST00000588860 TRIM11Q96F44 468 aa9.35□□□□□ -0.91
SMAD4-206ENST00000588860 HES6Q96HZ4 224 aa9.35□□□□□ -0.91
SMAD4-206ENST00000588860 MTG1Q9BT17 334 aaPredicted RBP9.35□□□□□ -0.91
SMAD4-206ENST00000588860 XYLT2Q9H1B5 865 aa9.35□□□□□ -0.91
SMAD4-206ENST00000588860 ASB7Q9H672 318 aa9.35□□□□□ -0.91
SMAD4-206ENST00000588860 CDHR5Q9HBB8 845 aa9.35□□□□□ -0.91
SMAD4-206ENST00000588860 ABCB6Q9NP58 842 aa9.35□□□□□ -0.91
SMAD4-206ENST00000588860 CISHQ9NSE2 258 aa9.35□□□□□ -0.91
SMAD4-206ENST00000588860 RBM12Q9NTZ6 932 aaKnown RBP9.35□□□□□ -0.91
SMAD4-206ENST00000588860 UVRAGQ9P2Y5 699 aa9.35□□□□□ -0.91
SMAD4-206ENST00000588860 CHORDC1Q9UHD1 332 aaPredicted RBP9.35□□□□□ -0.91
SMAD4-206ENST00000588860 GTF3C4Q9UKN8 822 aa9.35□□□□□ -0.91
SMAD4-206ENST00000588860 CCDC151A5D8V7 595 aa9.34□□□□□ -0.91
SMAD4-206ENST00000588860 PGRMC1O00264 195 aaKnown RBP9.34□□□□□ -0.91
SMAD4-206ENST00000588860 DDX3YO15523 660 aaKnown RBP9.34□□□□□ -0.91
SMAD4-206ENST00000588860 CYP1A1P04798 512 aaPredicted RBP9.34□□□□□ -0.91
SMAD4-206ENST00000588860 TUBBP07437 444 aa9.34□□□□□ -0.91
SMAD4-206ENST00000588860 CFHP08603 1231 aa9.34□□□□□ -0.91
SMAD4-206ENST00000588860 WEE2P0C1S8 567 aa9.34□□□□□ -0.91
SMAD4-206ENST00000588860 MYBL1P10243 752 aa9.34□□□□□ -0.91
SMAD4-206ENST00000588860 MCM3P25205 808 aa9.34□□□□□ -0.91
SMAD4-206ENST00000588860 BRD2P25440 801 aaKnown RBP9.34□□□□□ -0.91
SMAD4-206ENST00000588860 POLR2BP30876 1174 aaKnown RBP9.34□□□□□ -0.91
SMAD4-206ENST00000588860 RAP1GAPP47736 663 aa9.34□□□□□ -0.91
SMAD4-206ENST00000588860 FLT3LGP49771 235 aa9.34□□□□□ -0.91
SMAD4-206ENST00000588860 GUCY2FP51841 1108 aa9.34□□□□□ -0.91
SMAD4-206ENST00000588860 GJA9P57773 515 aa9.34□□□□□ -0.91
SMAD4-206ENST00000588860 ADAM17P78536 824 aa9.34□□□□□ -0.91
SMAD4-206ENST00000588860 CENPCQ03188 943 aa9.34□□□□□ -0.91
SMAD4-206ENST00000588860 PRKCZQ05513 592 aa9.34□□□□□ -0.91
SMAD4-206ENST00000588860 SNX17Q15036 470 aa9.34□□□□□ -0.91
SMAD4-206ENST00000588860 LIN9Q5TKA1 542 aa9.34□□□□□ -0.91
SMAD4-206ENST00000588860 PPP1R2P3Q6NXS1 205 aa9.34□□□□□ -0.91
SMAD4-206ENST00000588860 NOTUMQ6P988 496 aa9.34□□□□□ -0.91
SMAD4-206ENST00000588860 SLC27A1Q6PCB7 646 aa9.34□□□□□ -0.91
SMAD4-206ENST00000588860 PHLDB2Q86SQ0 1253 aa9.34□□□□□ -0.91
SMAD4-206ENST00000588860 CD302Q8IX05 232 aa9.34□□□□□ -0.91
SMAD4-206ENST00000588860 MCOLN2Q8IZK6 566 aa9.34□□□□□ -0.91
SMAD4-206ENST00000588860 CYFIP2Q96F07 1278 aa9.34□□□□□ -0.91
SMAD4-206ENST00000588860 BTBD6Q96KE9 485 aa9.34□□□□□ -0.91
SMAD4-206ENST00000588860 C11orf70Q9BRQ4 267 aa9.34□□□□□ -0.91
SMAD4-206ENST00000588860 EIF2AQ9BY44 585 aaKnown RBP9.34□□□□□ -0.91
SMAD4-206ENST00000588860 UPF3AQ9H1J1 476 aaKnown RBP9.34□□□□□ -0.91
SMAD4-206ENST00000588860 SMYD3Q9H7B4 428 aa9.34□□□□□ -0.91
SMAD4-206ENST00000588860 SPC25Q9HBM1 224 aa9.34□□□□□ -0.91
SMAD4-206ENST00000588860 ARFGAP3Q9NP61 516 aa9.34□□□□□ -0.91
SMAD4-206ENST00000588860 AVENQ9NQS1 362 aaPredicted RBP9.34□□□□□ -0.91
SMAD4-206ENST00000588860 ITGA11Q9UKX5 1188 aa9.34□□□□□ -0.91
SMAD4-206ENST00000588860 NOC2LQ9Y3T9 749 aaKnown RBP9.34□□□□□ -0.91
SMAD4-206ENST00000588860 SPOPO43791 374 aa9.33□□□□□ -0.92
SMAD4-206ENST00000588860 PGK1P00558 417 aa9.33□□□□□ -0.92
SMAD4-206ENST00000588860 RARBP10826 455 aa9.33□□□□□ -0.92
SMAD4-206ENST00000588860 P4HA1P13674 534 aa9.33□□□□□ -0.92
SMAD4-206ENST00000588860 COMTP21964 271 aa9.33□□□□□ -0.92
SMAD4-206ENST00000588860 RRM1P23921 792 aa9.33□□□□□ -0.92
SMAD4-206ENST00000588860 AXLP30530 894 aa9.33□□□□□ -0.92
SMAD4-206ENST00000588860 HOXA11P31270 313 aaPredicted RBP9.33□□□□□ -0.92
SMAD4-206ENST00000588860 ATICP31939 592 aa9.33□□□□□ -0.92
SMAD4-206ENST00000588860 YARSP54577 528 aaKnown RBP9.33□□□□□ -0.92
SMAD4-206ENST00000588860 TNNC1P63316 161 aa9.33□□□□□ -0.92
SMAD4-206ENST00000588860 NOMO3P69849 1222 aa9.33□□□□□ -0.92
SMAD4-206ENST00000588860 RBP5P82980 135 aa9.33□□□□□ -0.92
SMAD4-206ENST00000588860 TRIM32Q13049 653 aa9.33□□□□□ -0.92
SMAD4-206ENST00000588860 PCBP1Q15365 356 aaKnown RBP eCLIP9.33□□□□□ -0.92
SMAD4-206ENST00000588860 ZNF394Q53GI3 561 aa9.33□□□□□ -0.92
SMAD4-206ENST00000588860 GNASQ5JWF2 1037 aa9.33□□□□□ -0.92
SMAD4-206ENST00000588860 C8orf74Q6P047 294 aa9.33□□□□□ -0.92
SMAD4-206ENST00000588860 WDR93Q6P2C0 686 aa9.33□□□□□ -0.92
SMAD4-206ENST00000588860 MMS22LQ6ZRQ5 1243 aa9.33□□□□□ -0.92
SMAD4-206ENST00000588860 MON1BQ7L1V2 547 aa9.33□□□□□ -0.92
SMAD4-206ENST00000588860 NT5DC4Q86YG4 428 aa9.33□□□□□ -0.92
SMAD4-206ENST00000588860 PHF13Q86YI8 300 aaPredicted RBP9.33□□□□□ -0.92
SMAD4-206ENST00000588860 NME8Q8N427 588 aa9.33□□□□□ -0.92
SMAD4-206ENST00000588860 UBL4BQ8N7F7 174 aa9.33□□□□□ -0.92
SMAD4-206ENST00000588860 USP38Q8NB14 1042 aa9.33□□□□□ -0.92
SMAD4-206ENST00000588860 ACTRT1Q8TDG2 376 aa9.33□□□□□ -0.92
SMAD4-206ENST00000588860 HPDLQ96IR7 371 aa9.33□□□□□ -0.92
SMAD4-206ENST00000588860 SNX27Q96L92 541 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms