RNA–Protein interactions for RNA: ENST00000588815.5

CAPNS1-206, Transcript of calpain small subunit 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-206ENST00000588815 TMEM130Q8N3G9 435 aa33.16■■■□□ 2.9
CAPNS1-206ENST00000588815 TSGA10Q9BZW7 698 aa33.16■■■□□ 2.9
CAPNS1-206ENST00000588815 GOLGA2P5Q9HBQ8 144 aa33.16■■■□□ 2.9
CAPNS1-206ENST00000588815 NENFQ9UMX5 172 aa33.16■■■□□ 2.9
CAPNS1-206ENST00000588815 SNX9Q9Y5X1 595 aa33.16■■■□□ 2.9
CAPNS1-206ENST00000588815 DDX3XO00571 662 aaKnown RBP eCLIP33.15■■■□□ 2.97e-11■■■■■ 42.7
CAPNS1-206ENST00000588815 TUBB4AP04350 444 aa33.15■■■□□ 2.9
CAPNS1-206ENST00000588815 PAEPP09466 180 aa33.15■■■□□ 2.9
CAPNS1-206ENST00000588815 CD58P19256 250 aa33.15■■■□□ 2.9
CAPNS1-206ENST00000588815 MAGEA1P43355 309 aa33.15■■■□□ 2.9
CAPNS1-206ENST00000588815 CYP27A1Q02318 531 aa33.15■■■□□ 2.9
CAPNS1-206ENST00000588815 IKBKEQ14164 716 aa33.15■■■□□ 2.9
CAPNS1-206ENST00000588815 ALKBH5Q6P6C2 394 aaKnown RBP33.15■■■□□ 2.9
CAPNS1-206ENST00000588815 MMS19Q96T76 1030 aa33.15■■■□□ 2.9
CAPNS1-206ENST00000588815 SMYD3Q9H7B4 428 aa33.15■■■□□ 2.9
CAPNS1-206ENST00000588815 BARX2Q9UMQ3 279 aaPredicted RBP33.15■■■□□ 2.9
CAPNS1-206ENST00000588815 PFKMP08237 780 aa33.14■■■□□ 2.9
CAPNS1-206ENST00000588815 RAG1P15918 1043 aa33.14■■■□□ 2.9
CAPNS1-206ENST00000588815 GNA15P30679 374 aa33.14■■■□□ 2.9
CAPNS1-206ENST00000588815 AFF1P51825 1210 aaKnown RBP33.14■■■□□ 2.9
CAPNS1-206ENST00000588815 LILRA4P59901 499 aa33.14■■■□□ 2.9
CAPNS1-206ENST00000588815 ARHGAP29Q52LW3 1261 aa33.14■■■□□ 2.9
CAPNS1-206ENST00000588815 NOMO2Q5JPE7 1267 aa33.14■■■□□ 2.9
CAPNS1-206ENST00000588815 DEFB128Q7Z7B8 93 aa33.14■■■□□ 2.9
CAPNS1-206ENST00000588815 GLYCTKQ8IVS8 523 aa33.14■■■□□ 2.9
CAPNS1-206ENST00000588815 OLIG1Q8TAK6 271 aa33.14■■■□□ 2.9
CAPNS1-206ENST00000588815 DDX1Q92499 740 aaKnown RBP33.14■■■□□ 2.9
CAPNS1-206ENST00000588815 INTUQ9ULD6 942 aa33.14■■■□□ 2.9
CAPNS1-206ENST00000588815 LRFN2Q9ULH4 789 aa33.14■■■□□ 2.9
CAPNS1-206ENST00000588815 KIF2AO00139 706 aaPredicted RBP33.13■■■□□ 2.89
CAPNS1-206ENST00000588815 KRT86O43790 486 aa33.13■■■□□ 2.89
CAPNS1-206ENST00000588815 CILPO75339 1184 aa33.13■■■□□ 2.89
CAPNS1-206ENST00000588815 GZMAP12544 262 aa33.13■■■□□ 2.89
CAPNS1-206ENST00000588815 EN2P19622 333 aaPredicted RBP33.13■■■□□ 2.89
CAPNS1-206ENST00000588815 CLLU1OSQ5K130 101 aa33.13■■■□□ 2.89
CAPNS1-206ENST00000588815 MFSD5Q6N075 450 aa33.13■■■□□ 2.89
CAPNS1-206ENST00000588815 RPUSD2Q8IZ73 545 aaKnown RBP33.13■■■□□ 2.89
CAPNS1-206ENST00000588815 TMEM199Q8N511 208 aa33.13■■■□□ 2.89
CAPNS1-206ENST00000588815 LNX1Q8TBB1 728 aaPredicted RBP33.13■■■□□ 2.89
CAPNS1-206ENST00000588815 DNAI2Q9GZS0 605 aa33.13■■■□□ 2.89
CAPNS1-206ENST00000588815 SDCBP2Q9H190 292 aa33.13■■■□□ 2.89
CAPNS1-206ENST00000588815 INPP5FQ9Y2H2 1132 aa33.13■■■□□ 2.89
CAPNS1-206ENST00000588815 PODXLO00592 558 aa33.12■■■□□ 2.89
CAPNS1-206ENST00000588815 PJA2O43164 708 aa33.12■■■□□ 2.89
CAPNS1-206ENST00000588815 TACC1O75410 805 aa33.12■■■□□ 2.89
CAPNS1-206ENST00000588815 POMCP01189 267 aa33.12■■■□□ 2.89
CAPNS1-206ENST00000588815 KIF5AQ12840 1032 aa33.12■■■□□ 2.89
CAPNS1-206ENST00000588815 UPP1Q16831 310 aa33.12■■■□□ 2.89
CAPNS1-206ENST00000588815 CCDC122Q5T0U0 273 aa33.12■■■□□ 2.89
CAPNS1-206ENST00000588815 LIMS2Q7Z4I7 341 aa33.12■■■□□ 2.89
CAPNS1-206ENST00000588815 NPAS4Q8IUM7 802 aa33.12■■■□□ 2.89
CAPNS1-206ENST00000588815 CRIPAKQ8N1N5 446 aa33.12■■■□□ 2.89
CAPNS1-206ENST00000588815 TOP6BLQ8N6T0 577 aa33.12■■■□□ 2.89
CAPNS1-206ENST00000588815 SLC20A1Q8WUM9 679 aa33.12■■■□□ 2.89
CAPNS1-206ENST00000588815 PRDM5Q9NQX1 630 aaPredicted RBP33.12■■■□□ 2.89
CAPNS1-206ENST00000588815 MYH10P35580 1976 aa33.12■■■□□ 2.89
CAPNS1-206ENST00000588815 LOC101059915A0A1B0GWI6 518 aaPredicted RBP33.12■■■□□ 2.89
CAPNS1-206ENST00000588815 TRIM43BA6NCK2 446 aa33.12■■■□□ 2.89
CAPNS1-206ENST00000588815 EFCAB14O75071 495 aa33.12■■■□□ 2.89
CAPNS1-206ENST00000588815 IBSPP21815 317 aaPredicted RBP33.12■■■□□ 2.89
CAPNS1-206ENST00000588815 CDH8P55286 799 aa33.12■■■□□ 2.89
CAPNS1-206ENST00000588815 FMO1Q01740 532 aa33.12■■■□□ 2.89
CAPNS1-206ENST00000588815 TRIM72Q6ZMU5 477 aa33.12■■■□□ 2.89
CAPNS1-206ENST00000588815 ABI1Q8IZP0 508 aa33.12■■■□□ 2.89
CAPNS1-206ENST00000588815 TRIM43Q96BQ3 446 aaPredicted RBP33.12■■■□□ 2.89
CAPNS1-206ENST00000588815 ABHD14A-ACY1A0A1B0GW23 586 aa33.11■■■□□ 2.89
CAPNS1-206ENST00000588815 CHRNB2P17787 502 aa33.11■■■□□ 2.89
CAPNS1-206ENST00000588815 CLCNKBP51801 687 aa33.11■■■□□ 2.89
CAPNS1-206ENST00000588815 PTPN14Q15678 1187 aa33.11■■■□□ 2.89
CAPNS1-206ENST00000588815 PPP1R2P3Q6NXS1 205 aa33.11■■■□□ 2.89
CAPNS1-206ENST00000588815 NYAP1Q6ZVC0 841 aa33.11■■■□□ 2.89
CAPNS1-206ENST00000588815 UNC93AQ86WB7 457 aa33.11■■■□□ 2.89
CAPNS1-206ENST00000588815 KIAA1257Q9ULG3 409 aa33.11■■■□□ 2.89
CAPNS1-206ENST00000588815 HUS1O60921 280 aa33.1■■■□□ 2.89
CAPNS1-206ENST00000588815 RAP1GAPP47736 663 aa33.1■■■□□ 2.89
CAPNS1-206ENST00000588815 TCTN1Q2MV58 587 aa33.1■■■□□ 2.89
CAPNS1-206ENST00000588815 APPL2Q8NEU8 664 aa33.1■■■□□ 2.89
CAPNS1-206ENST00000588815 ACP6Q9NPH0 428 aa33.1■■■□□ 2.89
CAPNS1-206ENST00000588815 SEPT11Q9NVA2 429 aaKnown RBP33.1■■■□□ 2.89
CAPNS1-206ENST00000588815 MMEP08473 750 aa33.09■■■□□ 2.89
CAPNS1-206ENST00000588815 DSC1Q08554 894 aa33.09■■■□□ 2.89
CAPNS1-206ENST00000588815 ZNF606Q8WXB4 792 aa33.09■■■□□ 2.89
CAPNS1-206ENST00000588815 TMEM176AQ96HP8 235 aa33.09■■■□□ 2.89
CAPNS1-206ENST00000588815 NT5C1AQ9BXI3 368 aa33.09■■■□□ 2.89
CAPNS1-206ENST00000588815 MRPL9Q9BYD2 267 aaKnown RBP33.09■■■□□ 2.89
CAPNS1-206ENST00000588815 TSC2P49815 1807 aa33.08■■■□□ 2.89
CAPNS1-206ENST00000588815 SPTLC1O15269 473 aa33.08■■■□□ 2.89
CAPNS1-206ENST00000588815 MED7O43513 233 aa33.08■■■□□ 2.89
CAPNS1-206ENST00000588815 FGFR1P11362 822 aa33.08■■■□□ 2.89
CAPNS1-206ENST00000588815 AARSP49588 968 aaKnown RBP eCLIP33.08■■■□□ 2.89
CAPNS1-206ENST00000588815 RAD23BP54727 409 aa33.08■■■□□ 2.89
CAPNS1-206ENST00000588815 SOWAHAQ2M3V2 549 aa33.08■■■□□ 2.89
CAPNS1-206ENST00000588815 TAF3Q5VWG9 929 aa33.08■■■□□ 2.89
CAPNS1-206ENST00000588815 SPATA18Q8TC71 538 aa33.08■■■□□ 2.89
CAPNS1-206ENST00000588815 WHAMMQ8TF30 809 aa33.08■■■□□ 2.89
CAPNS1-206ENST00000588815 ISCUQ9H1K1 167 aa33.08■■■□□ 2.89
CAPNS1-206ENST00000588815 LZTFL1Q9NQ48 299 aa33.08■■■□□ 2.89
CAPNS1-206ENST00000588815 ARHGEF37A1IGU5 675 aa33.07■■■□□ 2.88
CAPNS1-206ENST00000588815 CASTOR2A6NHX0 329 aa33.07■■■□□ 2.88
CAPNS1-206ENST00000588815 THAP12O43422 761 aa33.07■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms