RNA–Protein interactions for RNA: ENST00000588552.5

PTPRS-206, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

TSL 1 (best)

Gene PTPRS, Length 5,443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-206ENST00000588552 CCNYL1Q8N7R7 359 aa16.29■□□□□ 0.2
PTPRS-206ENST00000588552 PPWD1Q96BP3 646 aaKnown RBP16.29■□□□□ 0.2
PTPRS-206ENST00000588552 THAP2Q9H0W7 228 aa16.29■□□□□ 0.2
PTPRS-206ENST00000588552 GTF3C4Q9UKN8 822 aa16.29■□□□□ 0.2
PTPRS-206ENST00000588552 SKIV2LQ15477 1246 aaKnown RBP16.29■□□□□ 0.2
PTPRS-206ENST00000588552 ANO4Q32M45 955 aa16.29■□□□□ 0.2
PTPRS-206ENST00000588552 COG1Q8WTW3 980 aa16.29■□□□□ 0.2
PTPRS-206ENST00000588552 DNAJC7Q99615 494 aa16.29■□□□□ 0.2
PTPRS-206ENST00000588552 COLEC11Q9BWP8 271 aa16.29■□□□□ 0.2
PTPRS-206ENST00000588552 SETD4Q9NVD3 440 aa16.29■□□□□ 0.2
PTPRS-206ENST00000588552 GPRC5DQ9NZD1 345 aa16.29■□□□□ 0.2
PTPRS-206ENST00000588552 ZFATQ9P243 1243 aa16.29■□□□□ 0.2
PTPRS-206ENST00000588552 ZC3H11AO75152 810 aaKnown RBP eCLIP16.29■□□□□ 0.2
PTPRS-206ENST00000588552 AKAP3O75969 853 aa16.29■□□□□ 0.2
PTPRS-206ENST00000588552 ITIH2P19823 946 aa16.29■□□□□ 0.2
PTPRS-206ENST00000588552 CDR2Q01850 454 aa16.29■□□□□ 0.2
PTPRS-206ENST00000588552 CYP24A1Q07973 514 aa16.29■□□□□ 0.2
PTPRS-206ENST00000588552 KIF19Q2TAC6 998 aa16.29■□□□□ 0.2
PTPRS-206ENST00000588552 PPHLN1Q8NEY8 458 aaKnown RBP16.29■□□□□ 0.2
PTPRS-206ENST00000588552 KPNA6O60684 536 aa16.28■□□□□ 0.2
PTPRS-206ENST00000588552 RARRES1P49788 294 aa16.28■□□□□ 0.2
PTPRS-206ENST00000588552 ORC1Q13415 861 aa16.28■□□□□ 0.2
PTPRS-206ENST00000588552 ATP6V1G3Q96LB4 118 aa16.28■□□□□ 0.2
PTPRS-206ENST00000588552 RBM12Q9NTZ6 932 aaKnown RBP16.28■□□□□ 0.2
PTPRS-206ENST00000588552 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.28■□□□□ 0.2
PTPRS-206ENST00000588552 ABI2Q9NYB9 513 aaPredicted RBP16.28■□□□□ 0.2
PTPRS-206ENST00000588552 CCDC195A0A1B0GUA6 201 aa16.28■□□□□ 0.2
PTPRS-206ENST00000588552 DCDC2CA8MYV0 355 aa16.28■□□□□ 0.2
PTPRS-206ENST00000588552 DCTN3O75935 186 aa16.28■□□□□ 0.2
PTPRS-206ENST00000588552 IRF1P10914 325 aa16.28■□□□□ 0.2
PTPRS-206ENST00000588552 HSPA8P11142 646 aaKnown RBP16.28■□□□□ 0.2
PTPRS-206ENST00000588552 CNTN2Q02246 1040 aa16.28■□□□□ 0.2
PTPRS-206ENST00000588552 STAT4Q14765 748 aa16.28■□□□□ 0.2
PTPRS-206ENST00000588552 PABPC5Q96DU9 382 aaKnown RBP16.28■□□□□ 0.2
PTPRS-206ENST00000588552 PNMA5Q96PV4 448 aa16.28■□□□□ 0.2
PTPRS-206ENST00000588552 DYRK4Q9NR20 520 aa16.28■□□□□ 0.2
PTPRS-206ENST00000588552 SMARCAL1Q9NZC9 954 aa16.28■□□□□ 0.2
PTPRS-206ENST00000588552 PPARGC1AQ9UBK2 798 aaKnown RBP16.28■□□□□ 0.2
PTPRS-206ENST00000588552 ADAM21Q9UKJ8 722 aa16.28■□□□□ 0.2
PTPRS-206ENST00000588552 APOBEC2Q9Y235 224 aaKnown RBP16.28■□□□□ 0.2
PTPRS-206ENST00000588552 PCDHAC2Q9Y5I4 1007 aa16.28■□□□□ 0.2
PTPRS-206ENST00000588552 CFAP69A5D8W1 941 aa16.28■□□□□ 0.2
PTPRS-206ENST00000588552 AP3B1O00203 1094 aa16.28■□□□□ 0.2
PTPRS-206ENST00000588552 NUDT18Q6ZVK8 323 aa16.28■□□□□ 0.2
PTPRS-206ENST00000588552 HAUS8Q9BT25 410 aa16.28■□□□□ 0.2
PTPRS-206ENST00000588552 GOLPH3Q9H4A6 298 aa16.28■□□□□ 0.2
PTPRS-206ENST00000588552 RPLP2P05387 115 aaKnown RBP16.28■□□□□ 0.2
PTPRS-206ENST00000588552 ALDH1A3P47895 512 aa16.28■□□□□ 0.2
PTPRS-206ENST00000588552 SPATA18Q8TC71 538 aa16.28■□□□□ 0.2
PTPRS-206ENST00000588552 SLITRK1Q96PX8 696 aa16.28■□□□□ 0.2
PTPRS-206ENST00000588552 FAM118BQ9BPY3 351 aa16.28■□□□□ 0.2
PTPRS-206ENST00000588552 VTA1Q9NP79 307 aa16.28■□□□□ 0.2
PTPRS-206ENST00000588552 TPX2Q9ULW0 747 aaKnown RBP16.28■□□□□ 0.2
PTPRS-206ENST00000588552 TFR2Q9UP52 801 aa16.28■□□□□ 0.2
PTPRS-206ENST00000588552 SMIM22K7EJ46 135 aa16.28■□□□□ 0.2
PTPRS-206ENST00000588552 CST8O60676 142 aa16.28■□□□□ 0.2
PTPRS-206ENST00000588552 YY1P25490 414 aa16.28■□□□□ 0.2
PTPRS-206ENST00000588552 ERVK-9P63128 1117 aa16.28■□□□□ 0.2
PTPRS-206ENST00000588552 ERVK-24P63145 666 aa16.28■□□□□ 0.2
PTPRS-206ENST00000588552 OSMRQ99650 979 aa16.28■□□□□ 0.2
PTPRS-206ENST00000588552 PPME1Q9Y570 386 aa16.28■□□□□ 0.2
PTPRS-206ENST00000588552 GNGT2O14610 69 aa16.27■□□□□ 0.2
PTPRS-206ENST00000588552 PSMD3O43242 534 aa16.27■□□□□ 0.2
PTPRS-206ENST00000588552 GRIK4Q16099 956 aa16.27■□□□□ 0.2
PTPRS-206ENST00000588552 IL31Q6EBC2 164 aa16.27■□□□□ 0.2
PTPRS-206ENST00000588552 ACOT1Q86TX2 421 aa16.27■□□□□ 0.2
PTPRS-206ENST00000588552 WDR49Q8IV35 697 aa16.27■□□□□ 0.2
PTPRS-206ENST00000588552 RBM15Q96T37 977 aaKnown RBP eCLIP16.27■□□□□ 0.2
PTPRS-206ENST00000588552 CATSPERBQ9H7T0 1116 aa16.27■□□□□ 0.2
PTPRS-206ENST00000588552 A1CFQ9NQ94 594 aaKnown RBP16.27■□□□□ 0.2
PTPRS-206ENST00000588552 SUN2Q9UH99 717 aa16.27■□□□□ 0.2
PTPRS-206ENST00000588552 A0A087X0T9 212 aa16.27■□□□□ 0.2
PTPRS-206ENST00000588552 FAM228BP0C875 321 aa16.27■□□□□ 0.2
PTPRS-206ENST00000588552 MAPTP10636 758 aaKnown RBP16.27■□□□□ 0.2
PTPRS-206ENST00000588552 KITP10721 976 aa16.27■□□□□ 0.2
PTPRS-206ENST00000588552 BFSP2Q13515 415 aa16.27■□□□□ 0.2
PTPRS-206ENST00000588552 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.27■□□□□ 0.29e-7■■■■■ 60.5
PTPRS-206ENST00000588552 CLMNQ96JQ2 1002 aa16.27■□□□□ 0.2
PTPRS-206ENST00000588552 FAM96AQ9H5X1 160 aa16.27■□□□□ 0.2
PTPRS-206ENST00000588552 OLA1Q9NTK5 396 aaKnown RBP16.27■□□□□ 0.2
PTPRS-206ENST00000588552 RRP15Q9Y3B9 282 aaKnown RBP16.27■□□□□ 0.2
PTPRS-206ENST00000588552 IL1RL1Q01638 556 aa16.27■□□□□ 0.19
PTPRS-206ENST00000588552 TMEM119Q4V9L6 283 aa16.27■□□□□ 0.19
PTPRS-206ENST00000588552 RNF135Q8IUD6 432 aa16.27■□□□□ 0.19
PTPRS-206ENST00000588552 ATXN7L3BQ96GX2 97 aa16.27■□□□□ 0.19
PTPRS-206ENST00000588552 FGD4Q96M96 766 aa16.27■□□□□ 0.19
PTPRS-206ENST00000588552 NDFIP2Q9NV92 336 aa16.27■□□□□ 0.19
PTPRS-206ENST00000588552 SIGLEC1Q9BZZ2 1709 aa16.27■□□□□ 0.19
PTPRS-206ENST00000588552 C2CD2LO14523 706 aa16.27■□□□□ 0.19
PTPRS-206ENST00000588552 CSDE1O75534 798 aaKnown RBP16.27■□□□□ 0.19
PTPRS-206ENST00000588552 VDRP11473 427 aa16.27■□□□□ 0.19
PTPRS-206ENST00000588552 MYBPC2Q14324 1141 aa16.27■□□□□ 0.19
PTPRS-206ENST00000588552 PDK1Q15118 436 aa16.27■□□□□ 0.19
PTPRS-206ENST00000588552 HABP4Q5JVS0 413 aaKnown RBP16.27■□□□□ 0.19
PTPRS-206ENST00000588552 C10orf120Q5SQS8 335 aa16.27■□□□□ 0.19
PTPRS-206ENST00000588552 TAS1R2Q8TE23 839 aa16.27■□□□□ 0.19
PTPRS-206ENST00000588552 CYTH2Q99418 400 aa16.27■□□□□ 0.19
PTPRS-206ENST00000588552 ZBTB18Q99592 522 aa16.27■□□□□ 0.19
PTPRS-206ENST00000588552 MUC3BQ9H195 1237 aa16.27■□□□□ 0.19
PTPRS-206ENST00000588552 ABHD16BQ9H3Z7 469 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms