RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 SPTLC1O15269 473 aa9.73□□□□□ -0.85
CIRBP-218ENST00000588344 TACC1O75410 805 aa9.73□□□□□ -0.85
CIRBP-218ENST00000588344 VNN1O95497 513 aa9.73□□□□□ -0.85
CIRBP-218ENST00000588344 ASS1P00966 412 aaKnown RBP9.73□□□□□ -0.85
CIRBP-218ENST00000588344 HLA-DRAP01903 254 aa9.73□□□□□ -0.85
CIRBP-218ENST00000588344 ADH1AP07327 375 aa9.73□□□□□ -0.85
CIRBP-218ENST00000588344 SRGAP2BP0DMP2 458 aa9.73□□□□□ -0.85
CIRBP-218ENST00000588344 FOSL2P15408 326 aa9.73□□□□□ -0.85
CIRBP-218ENST00000588344 BRCC3P46736 316 aa9.73□□□□□ -0.85
CIRBP-218ENST00000588344 MYL6P60660 151 aa9.73□□□□□ -0.85
CIRBP-218ENST00000588344 MYL7Q01449 175 aa9.73□□□□□ -0.85
CIRBP-218ENST00000588344 SMARCB1Q12824 385 aa9.73□□□□□ -0.85
CIRBP-218ENST00000588344 CAMK1Q14012 370 aa9.73□□□□□ -0.85
CIRBP-218ENST00000588344 NCAPHQ15003 741 aa9.73□□□□□ -0.85
CIRBP-218ENST00000588344 IQCB1Q15051 598 aa9.73□□□□□ -0.85
CIRBP-218ENST00000588344 PTPN14Q15678 1187 aa9.73□□□□□ -0.85
CIRBP-218ENST00000588344 FILIP1LQ4L180 1135 aa9.73□□□□□ -0.85
CIRBP-218ENST00000588344 CBWD6Q4V339 395 aa9.73□□□□□ -0.85
CIRBP-218ENST00000588344 CBWD3Q5JTY5 395 aa9.73□□□□□ -0.85
CIRBP-218ENST00000588344 CBWD5Q5RIA9 395 aa9.73□□□□□ -0.85
CIRBP-218ENST00000588344 VARS2Q5ST30 1063 aaKnown RBP9.73□□□□□ -0.85
CIRBP-218ENST00000588344 OVOS1Q6IE37 1185 aa9.73□□□□□ -0.85
CIRBP-218ENST00000588344 ZNF280DQ6N043 979 aa9.73□□□□□ -0.85
CIRBP-218ENST00000588344 GBP6Q6ZN66 633 aa9.73□□□□□ -0.85
CIRBP-218ENST00000588344 TAS1R1Q7RTX1 841 aa9.73□□□□□ -0.85
CIRBP-218ENST00000588344 LIMS2Q7Z4I7 341 aa9.73□□□□□ -0.85
CIRBP-218ENST00000588344 DHX40Q8IX18 779 aaKnown RBP9.73□□□□□ -0.85
CIRBP-218ENST00000588344 AOPEPQ8N6M6 819 aa9.73□□□□□ -0.85
CIRBP-218ENST00000588344 LNX1Q8TBB1 728 aaPredicted RBP9.73□□□□□ -0.85
CIRBP-218ENST00000588344 FAM200AQ8TCP9 573 aa9.73□□□□□ -0.85
CIRBP-218ENST00000588344 RIN2Q8WYP3 895 aaPredicted RBP9.73□□□□□ -0.85
CIRBP-218ENST00000588344 MMS19Q96T76 1030 aa9.73□□□□□ -0.85
CIRBP-218ENST00000588344 VN1R3Q9BXE9 311 aa9.73□□□□□ -0.85
CIRBP-218ENST00000588344 NDST4Q9H3R1 872 aa9.73□□□□□ -0.85
CIRBP-218ENST00000588344 MMRN2Q9H8L6 949 aa9.73□□□□□ -0.85
CIRBP-218ENST00000588344 CYP3A43Q9HB55 503 aa9.73□□□□□ -0.85
CIRBP-218ENST00000588344 LIMA1Q9UHB6 759 aaKnown RBP9.73□□□□□ -0.85
CIRBP-218ENST00000588344 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.72□□□□□ -0.85
CIRBP-218ENST00000588344 GABRDO14764 452 aa9.72□□□□□ -0.85
CIRBP-218ENST00000588344 PPEF2O14830 753 aa9.72□□□□□ -0.85
CIRBP-218ENST00000588344 TBC1D4O60343 1298 aa9.72□□□□□ -0.85
CIRBP-218ENST00000588344 CLSTN1O94985 981 aa9.72□□□□□ -0.85
CIRBP-218ENST00000588344 ZNF18P17022 549 aa9.72□□□□□ -0.85
CIRBP-218ENST00000588344 TBXAS1P24557 533 aaPredicted RBP9.72□□□□□ -0.85
CIRBP-218ENST00000588344 KLRC2P26717 231 aa9.72□□□□□ -0.85
CIRBP-218ENST00000588344 PCSK1P29120 753 aa9.72□□□□□ -0.85
CIRBP-218ENST00000588344 TKTP29401 623 aaKnown RBP9.72□□□□□ -0.85
CIRBP-218ENST00000588344 CA8P35219 290 aa9.72□□□□□ -0.85
CIRBP-218ENST00000588344 GNL1P36915 607 aaPredicted RBP9.72□□□□□ -0.85
CIRBP-218ENST00000588344 NDUFV1P49821 464 aa9.72□□□□□ -0.85
CIRBP-218ENST00000588344 YWHAEP62258 255 aaKnown RBP9.72□□□□□ -0.85
CIRBP-218ENST00000588344 RAB33AQ14088 237 aa9.72□□□□□ -0.85
CIRBP-218ENST00000588344 ADGRE1Q14246 886 aa9.72□□□□□ -0.85
CIRBP-218ENST00000588344 MAPRE1Q15691 268 aaKnown RBP9.72□□□□□ -0.85
CIRBP-218ENST00000588344 PSMD5Q16401 504 aa9.72□□□□□ -0.85
CIRBP-218ENST00000588344 EXOC3L4Q17RC7 722 aa9.72□□□□□ -0.85
CIRBP-218ENST00000588344 CTXN3Q4LDR2 81 aa9.72□□□□□ -0.85
CIRBP-218ENST00000588344 RTP2Q5QGT7 225 aa9.72□□□□□ -0.85
CIRBP-218ENST00000588344 FKBP15Q5T1M5 1219 aa9.72□□□□□ -0.85
CIRBP-218ENST00000588344 PLPP4Q5VZY2 271 aa9.72□□□□□ -0.85
CIRBP-218ENST00000588344 SLC8B1Q6J4K2 584 aa9.72□□□□□ -0.85
CIRBP-218ENST00000588344 Q7L0L9 218 aa9.72□□□□□ -0.85
CIRBP-218ENST00000588344 ENOSF1Q7L5Y1 443 aa9.72□□□□□ -0.85
CIRBP-218ENST00000588344 PDCL2Q8N4E4 241 aa9.72□□□□□ -0.85
CIRBP-218ENST00000588344 EHBP1Q8NDI1 1231 aa9.72□□□□□ -0.85
CIRBP-218ENST00000588344 TAS1R2Q8TE23 839 aa9.72□□□□□ -0.85
CIRBP-218ENST00000588344 HDAC7Q8WUI4 952 aa9.72□□□□□ -0.85
CIRBP-218ENST00000588344 JAKMIP2Q96AA8 810 aa9.72□□□□□ -0.85
CIRBP-218ENST00000588344 KLHL5Q96PQ7 755 aa9.72□□□□□ -0.85
CIRBP-218ENST00000588344 ACBD6Q9BR61 282 aa9.72□□□□□ -0.85
CIRBP-218ENST00000588344 SNX25Q9H3E2 840 aa9.72□□□□□ -0.85
CIRBP-218ENST00000588344 CBX8Q9HC52 389 aa9.72□□□□□ -0.85
CIRBP-218ENST00000588344 MTRRQ9UBK8 725 aa9.72□□□□□ -0.85
CIRBP-218ENST00000588344 NXF1Q9UBU9 619 aaKnown RBP9.72□□□□□ -0.85
CIRBP-218ENST00000588344 DAAM1Q9Y4D1 1078 aa9.72□□□□□ -0.85
CIRBP-218ENST00000588344 TRIOBPQ9H2D6 2365 aa9.72□□□□□ -0.85
CIRBP-218ENST00000588344 FNDC1Q4ZHG4 1894 aaPredicted RBP9.71□□□□□ -0.85
CIRBP-218ENST00000588344 I3L4J1 428 aa9.71□□□□□ -0.86
CIRBP-218ENST00000588344 PES1O00541 588 aaKnown RBP9.71□□□□□ -0.86
CIRBP-218ENST00000588344 C2CD2LO14523 706 aa9.71□□□□□ -0.86
CIRBP-218ENST00000588344 TEX28O15482 410 aa9.71□□□□□ -0.86
CIRBP-218ENST00000588344 CNPP09543 421 aaKnown RBP9.71□□□□□ -0.86
CIRBP-218ENST00000588344 WARSP23381 471 aaKnown RBP9.71□□□□□ -0.86
CIRBP-218ENST00000588344 IRS1P35568 1242 aa9.71□□□□□ -0.86
CIRBP-218ENST00000588344 NOP14P78316 857 aaKnown RBP9.71□□□□□ -0.86
CIRBP-218ENST00000588344 KRT31Q15323 416 aa9.71□□□□□ -0.86
CIRBP-218ENST00000588344 DUSP6Q16828 381 aa9.71□□□□□ -0.86
CIRBP-218ENST00000588344 SOWAHAQ2M3V2 549 aa9.71□□□□□ -0.86
CIRBP-218ENST00000588344 WSCD1Q658N2 575 aa9.71□□□□□ -0.86
CIRBP-218ENST00000588344 TPGS2Q68CL5 300 aa9.71□□□□□ -0.86
CIRBP-218ENST00000588344 UNC93AQ86WB7 457 aa9.71□□□□□ -0.86
CIRBP-218ENST00000588344 DCP1BQ8IZD4 617 aaKnown RBP9.71□□□□□ -0.86
CIRBP-218ENST00000588344 ADGRF2Q8IZF7 708 aa9.71□□□□□ -0.86
CIRBP-218ENST00000588344 C2orf15Q8WU43 125 aaKnown RBP9.71□□□□□ -0.86
CIRBP-218ENST00000588344 MYLIPQ8WY64 445 aa9.71□□□□□ -0.86
CIRBP-218ENST00000588344 GUCD1Q96NT3 240 aa9.71□□□□□ -0.86
CIRBP-218ENST00000588344 NT5C1BQ96P26 610 aa9.71□□□□□ -0.86
CIRBP-218ENST00000588344 CLSTN3Q9BQT9 956 aa9.71□□□□□ -0.86
CIRBP-218ENST00000588344 NIF3L1Q9GZT8 377 aa9.71□□□□□ -0.86
CIRBP-218ENST00000588344 PLEKHA4Q9H4M7 779 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms