RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 TRIM21P19474 475 aaKnown RBP12.76□□□□□ -0.37
SDHDP1-201ENST00000588055 KCNA5P22460 613 aa12.76□□□□□ -0.37
SDHDP1-201ENST00000588055 GTF2F1P35269 517 aaKnown RBP eCLIP12.76□□□□□ -0.37
SDHDP1-201ENST00000588055 GCLMP48507 274 aa12.76□□□□□ -0.37
SDHDP1-201ENST00000588055 CLCN4P51793 760 aa12.76□□□□□ -0.37
SDHDP1-201ENST00000588055 DLG4P78352 724 aa12.76□□□□□ -0.37
SDHDP1-201ENST00000588055 MYL7Q01449 175 aa12.76□□□□□ -0.37
SDHDP1-201ENST00000588055 ZACNQ401N2 412 aa12.76□□□□□ -0.37
SDHDP1-201ENST00000588055 KRT39Q6A163 491 aa12.76□□□□□ -0.37
SDHDP1-201ENST00000588055 CREBRFQ8IUR6 639 aa12.76□□□□□ -0.37
SDHDP1-201ENST00000588055 ADGRF2Q8IZF7 708 aa12.76□□□□□ -0.37
SDHDP1-201ENST00000588055 TMEM86AQ8N2M4 240 aa12.76□□□□□ -0.37
SDHDP1-201ENST00000588055 TMEM130Q8N3G9 435 aa12.76□□□□□ -0.37
SDHDP1-201ENST00000588055 TOP6BLQ8N6T0 577 aa12.76□□□□□ -0.37
SDHDP1-201ENST00000588055 SPATA18Q8TC71 538 aa12.76□□□□□ -0.37
SDHDP1-201ENST00000588055 PLEKHO2Q8TD55 490 aa12.76□□□□□ -0.37
SDHDP1-201ENST00000588055 FAM84AQ96KN4 292 aa12.76□□□□□ -0.37
SDHDP1-201ENST00000588055 MMS19Q96T76 1030 aa12.76□□□□□ -0.37
SDHDP1-201ENST00000588055 DUSP9Q99956 384 aaKnown RBP12.76□□□□□ -0.37
SDHDP1-201ENST00000588055 SRRTQ9BXP5 876 aaKnown RBP12.76□□□□□ -0.37
SDHDP1-201ENST00000588055 GDAP2Q9NXN4 497 aa12.76□□□□□ -0.37
SDHDP1-201ENST00000588055 TIMM13Q9Y5L4 95 aaPredicted RBP12.76□□□□□ -0.37
SDHDP1-201ENST00000588055 SPTLC1O15269 473 aa12.75□□□□□ -0.37
SDHDP1-201ENST00000588055 LILRB3O75022 631 aa12.75□□□□□ -0.37
SDHDP1-201ENST00000588055 STAU1O95793 577 aaKnown RBP12.75□□□□□ -0.37
SDHDP1-201ENST00000588055 C1RP00736 705 aa12.75□□□□□ -0.37
SDHDP1-201ENST00000588055 CYP11A1P05108 521 aa12.75□□□□□ -0.37
SDHDP1-201ENST00000588055 HOXB8P17481 243 aaPredicted RBP12.75□□□□□ -0.37
SDHDP1-201ENST00000588055 IGFBP6P24592 240 aaPredicted RBP12.75□□□□□ -0.37
SDHDP1-201ENST00000588055 ELF1P32519 619 aa12.75□□□□□ -0.37
SDHDP1-201ENST00000588055 OR1D2P34982 312 aa12.75□□□□□ -0.37
SDHDP1-201ENST00000588055 ARPP19P56211 112 aa12.75□□□□□ -0.37
SDHDP1-201ENST00000588055 TSPY1Q01534 308 aa12.75□□□□□ -0.37
SDHDP1-201ENST00000588055 MYO7AQ13402 2215 aa12.75□□□□□ -0.37
SDHDP1-201ENST00000588055 ADAM15Q13444 863 aa12.75□□□□□ -0.37
SDHDP1-201ENST00000588055 SGSM1Q2NKQ1 1148 aa12.75□□□□□ -0.37
SDHDP1-201ENST00000588055 WDR72Q3MJ13 1102 aa12.75□□□□□ -0.37
SDHDP1-201ENST00000588055 ZNF667Q5HYK9 610 aa12.75□□□□□ -0.37
SDHDP1-201ENST00000588055 SLC8B1Q6J4K2 584 aa12.75□□□□□ -0.37
SDHDP1-201ENST00000588055 SV2AQ7L0J3 742 aa12.75□□□□□ -0.37
SDHDP1-201ENST00000588055 PALB2Q86YC2 1186 aa12.75□□□□□ -0.37
SDHDP1-201ENST00000588055 PRUNE2Q8WUY3 3088 aa12.75□□□□□ -0.37
SDHDP1-201ENST00000588055 TAF4BQ92750 862 aa12.75□□□□□ -0.37
SDHDP1-201ENST00000588055 CNOT6LQ96LI5 555 aaKnown RBP12.75□□□□□ -0.37
SDHDP1-201ENST00000588055 DNAI2Q9GZS0 605 aa12.75□□□□□ -0.37
SDHDP1-201ENST00000588055 GZF1Q9H116 711 aaPredicted RBP12.75□□□□□ -0.37
SDHDP1-201ENST00000588055 PLEKHA4Q9H4M7 779 aa12.75□□□□□ -0.37
SDHDP1-201ENST00000588055 THAP9Q9H5L6 903 aa12.75□□□□□ -0.37
SDHDP1-201ENST00000588055 SFXN1Q9H9B4 322 aa12.75□□□□□ -0.37
SDHDP1-201ENST00000588055 MAN1C1Q9NR34 630 aa12.75□□□□□ -0.37
SDHDP1-201ENST00000588055 FBXL5Q9UKA1 691 aa12.75□□□□□ -0.37
SDHDP1-201ENST00000588055 BARX2Q9UMQ3 279 aaPredicted RBP12.75□□□□□ -0.37
SDHDP1-201ENST00000588055 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.75□□□□□ -0.37
SDHDP1-201ENST00000588055 LINC01565O15544 149 aa12.74□□□□□ -0.37
SDHDP1-201ENST00000588055 TBX10O75333 385 aa12.74□□□□□ -0.37
SDHDP1-201ENST00000588055 OAZ2O95190 189 aa12.74□□□□□ -0.37
SDHDP1-201ENST00000588055 SLC34A2O95436 690 aa12.74□□□□□ -0.37
SDHDP1-201ENST00000588055 GLP2RO95838 553 aa12.74□□□□□ -0.37
SDHDP1-201ENST00000588055 HLA-DRAP01903 254 aa12.74□□□□□ -0.37
SDHDP1-201ENST00000588055 C4BPAP04003 597 aaKnown RBP12.74□□□□□ -0.37
SDHDP1-201ENST00000588055 TPM2P07951 284 aa12.74□□□□□ -0.37
SDHDP1-201ENST00000588055 EPCAMP16422 314 aa12.74□□□□□ -0.37
SDHDP1-201ENST00000588055 PCSK1P29120 753 aa12.74□□□□□ -0.37
SDHDP1-201ENST00000588055 MTIF2P46199 727 aaKnown RBP12.74□□□□□ -0.37
SDHDP1-201ENST00000588055 LHX1P48742 406 aa12.74□□□□□ -0.37
SDHDP1-201ENST00000588055 MYL6P60660 151 aa12.74□□□□□ -0.37
SDHDP1-201ENST00000588055 ROR1Q01973 937 aa12.74□□□□□ -0.37
SDHDP1-201ENST00000588055 TYRO3Q06418 890 aa12.74□□□□□ -0.37
SDHDP1-201ENST00000588055 COL19A1Q14993 1142 aa12.74□□□□□ -0.37
SDHDP1-201ENST00000588055 CTC1Q2NKJ3 1217 aa12.74□□□□□ -0.37
SDHDP1-201ENST00000588055 PUS10Q3MIT2 529 aaKnown RBP12.74□□□□□ -0.37
SDHDP1-201ENST00000588055 WDR44Q5JSH3 913 aa12.74□□□□□ -0.37
SDHDP1-201ENST00000588055 WSCD1Q658N2 575 aa12.74□□□□□ -0.37
SDHDP1-201ENST00000588055 CES5AQ6NT32 575 aa12.74□□□□□ -0.37
SDHDP1-201ENST00000588055 CCDC149Q6ZUS6 474 aa12.74□□□□□ -0.37
SDHDP1-201ENST00000588055 DPH6Q7L8W6 267 aa12.74□□□□□ -0.37
SDHDP1-201ENST00000588055 PDCL2Q8N4E4 241 aa12.74□□□□□ -0.37
SDHDP1-201ENST00000588055 FBXL13Q8NEE6 735 aa12.74□□□□□ -0.37
SDHDP1-201ENST00000588055 CXorf38Q8TB03 319 aa12.74□□□□□ -0.37
SDHDP1-201ENST00000588055 ZNF516Q92618 1163 aa12.74□□□□□ -0.37
SDHDP1-201ENST00000588055 CLSTN3Q9BQT9 956 aa12.74□□□□□ -0.37
SDHDP1-201ENST00000588055 SNX25Q9H3E2 840 aa12.74□□□□□ -0.37
SDHDP1-201ENST00000588055 NXF1Q9UBU9 619 aaKnown RBP12.74□□□□□ -0.37
SDHDP1-201ENST00000588055 CD207Q9UJ71 328 aa12.74□□□□□ -0.37
SDHDP1-201ENST00000588055 XIRP2A4UGR9 3374 aa12.74□□□□□ -0.37
SDHDP1-201ENST00000588055 PLXNA3P51805 1871 aa12.74□□□□□ -0.37
SDHDP1-201ENST00000588055 H3BQ06 376 aaPredicted RBP12.73□□□□□ -0.37
SDHDP1-201ENST00000588055 PRRG1O14668 218 aa12.73□□□□□ -0.37
SDHDP1-201ENST00000588055 TGM5O43548 720 aa12.73□□□□□ -0.37
SDHDP1-201ENST00000588055 MARSP56192 900 aaKnown RBP12.73□□□□□ -0.37
SDHDP1-201ENST00000588055 NOP14P78316 857 aaKnown RBP12.73□□□□□ -0.37
SDHDP1-201ENST00000588055 MRPS5P82675 430 aaKnown RBP12.73□□□□□ -0.37
SDHDP1-201ENST00000588055 PPP3CAQ08209 521 aa12.73□□□□□ -0.37
SDHDP1-201ENST00000588055 RAB33AQ14088 237 aa12.73□□□□□ -0.37
SDHDP1-201ENST00000588055 MRPL58Q14197 206 aaKnown RBP12.73□□□□□ -0.37
SDHDP1-201ENST00000588055 CLUL1Q15846 466 aa12.73□□□□□ -0.37
SDHDP1-201ENST00000588055 TPGS2Q68CL5 300 aa12.73□□□□□ -0.37
SDHDP1-201ENST00000588055 ANKRD54Q6NXT1 300 aa12.73□□□□□ -0.37
SDHDP1-201ENST00000588055 TMEM184AQ6ZMB5 413 aa12.73□□□□□ -0.37
SDHDP1-201ENST00000588055 SCARA5Q6ZMJ2 495 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms