RNA–Protein interactions for RNA: ENST00000587708.6

PSENEN-202, Transcript of presenilin enhancer, gamma-secretase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSENEN, Length 1,661 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSENEN-202ENST00000587708 UBXN11Q5T124 520 aa18.66■□□□□ 0.58
PSENEN-202ENST00000587708 SPATA4Q8NEY3 305 aa18.66■□□□□ 0.58
PSENEN-202ENST00000587708 ZNF564Q8TBZ8 553 aaPredicted RBP18.66■□□□□ 0.58
PSENEN-202ENST00000587708 NUP85Q9BW27 656 aa18.66■□□□□ 0.58
PSENEN-202ENST00000587708 WNT8AQ9H1J5 351 aa18.66■□□□□ 0.58
PSENEN-202ENST00000587708 COG5Q9UP83 839 aa18.66■□□□□ 0.58
PSENEN-202ENST00000587708 ALG6Q9Y672 507 aa18.66■□□□□ 0.58
PSENEN-202ENST00000587708 SCINQ9Y6U3 715 aa18.66■□□□□ 0.58
PSENEN-202ENST00000587708 KCNK3O14649 394 aa18.65■□□□□ 0.58
PSENEN-202ENST00000587708 RECQL4O94761 1208 aa18.65■□□□□ 0.58
PSENEN-202ENST00000587708 CALB1P05937 261 aa18.65■□□□□ 0.58
PSENEN-202ENST00000587708 CD58P19256 250 aa18.65■□□□□ 0.58
PSENEN-202ENST00000587708 CAP1Q01518 475 aa18.65■□□□□ 0.58
PSENEN-202ENST00000587708 INCA1Q0VD86 236 aa18.65■□□□□ 0.58
PSENEN-202ENST00000587708 BRD3Q15059 726 aa18.65■□□□□ 0.58
PSENEN-202ENST00000587708 STILQ15468 1287 aa18.65■□□□□ 0.58
PSENEN-202ENST00000587708 NAA35Q5VZE5 725 aa18.65■□□□□ 0.58
PSENEN-202ENST00000587708 FAM43BQ6ZT52 329 aaPredicted RBP18.65■□□□□ 0.58
PSENEN-202ENST00000587708 MON1BQ7L1V2 547 aa18.65■□□□□ 0.58
PSENEN-202ENST00000587708 FAM228AQ86W67 206 aa18.65■□□□□ 0.58
PSENEN-202ENST00000587708 UBL4BQ8N7F7 174 aa18.65■□□□□ 0.58
PSENEN-202ENST00000587708 USP38Q8NB14 1042 aa18.65■□□□□ 0.58
PSENEN-202ENST00000587708 NAP1L3Q99457 506 aaPredicted RBP18.65■□□□□ 0.58
PSENEN-202ENST00000587708 SENP6Q9GZR1 1112 aaPredicted RBP18.65■□□□□ 0.58
PSENEN-202ENST00000587708 CARD9Q9H257 536 aa18.65■□□□□ 0.58
PSENEN-202ENST00000587708 ADAM22Q9P0K1 906 aa18.65■□□□□ 0.58
PSENEN-202ENST00000587708 BARX2Q9UMQ3 279 aaPredicted RBP18.65■□□□□ 0.58
PSENEN-202ENST00000587708 NOC2LQ9Y3T9 749 aaKnown RBP18.65■□□□□ 0.58
PSENEN-202ENST00000587708 PDE2AO00408 941 aaPredicted RBP18.64■□□□□ 0.57
PSENEN-202ENST00000587708 CILPO75339 1184 aa18.64■□□□□ 0.57
PSENEN-202ENST00000587708 FAM163BP0C2L3 166 aa18.64■□□□□ 0.57
PSENEN-202ENST00000587708 CXCR5P32302 372 aa18.64■□□□□ 0.57
PSENEN-202ENST00000587708 SLC1A1P43005 524 aa18.64■□□□□ 0.57
PSENEN-202ENST00000587708 VEGFBP49765 207 aa18.64■□□□□ 0.57
PSENEN-202ENST00000587708 PTGISQ16647 500 aa18.64■□□□□ 0.57
PSENEN-202ENST00000587708 RASGEF1CQ8N431 466 aa18.64■□□□□ 0.57
PSENEN-202ENST00000587708 PPP1R13LQ8WUF5 828 aa18.64■□□□□ 0.57
PSENEN-202ENST00000587708 RAB21Q9UL25 225 aa18.64■□□□□ 0.57
PSENEN-202ENST00000587708 TRIP12Q14669 1992 aaPredicted RBP18.64■□□□□ 0.57
PSENEN-202ENST00000587708 CCDC151A5D8V7 595 aa18.63■□□□□ 0.57
PSENEN-202ENST00000587708 CAPN15O75808 1086 aa18.63■□□□□ 0.57
PSENEN-202ENST00000587708 VDRP11473 427 aa18.63■□□□□ 0.57
PSENEN-202ENST00000587708 TAP1Q03518 808 aa18.63■□□□□ 0.57
PSENEN-202ENST00000587708 MGAT3Q09327 533 aa18.63■□□□□ 0.57
PSENEN-202ENST00000587708 FAM26DQ5JW98 314 aa18.63■□□□□ 0.57
PSENEN-202ENST00000587708 SCARA3Q6AZY7 606 aa18.63■□□□□ 0.57
PSENEN-202ENST00000587708 TWF2Q6IBS0 349 aaKnown RBP18.63■□□□□ 0.57
PSENEN-202ENST00000587708 CPA5Q8WXQ8 436 aa18.63■□□□□ 0.57
PSENEN-202ENST00000587708 TMEM176AQ96HP8 235 aa18.63■□□□□ 0.57
PSENEN-202ENST00000587708 TRAIPQ9BWF2 469 aa18.63■□□□□ 0.57
PSENEN-202ENST00000587708 PARD6BQ9BYG5 372 aa18.63■□□□□ 0.57
PSENEN-202ENST00000587708 NXF3Q9H4D5 531 aaKnown RBP18.63■□□□□ 0.57
PSENEN-202ENST00000587708 HMX1Q9NP08 348 aaPredicted RBP18.63■□□□□ 0.57
PSENEN-202ENST00000587708 PARVAQ9NVD7 372 aa18.63■□□□□ 0.57
PSENEN-202ENST00000587708 POLIQ9UNA4 740 aa18.63■□□□□ 0.57
PSENEN-202ENST00000587708 IPPQ9Y573 584 aa18.63■□□□□ 0.57
PSENEN-202ENST00000587708 SMIM28A0A1B0GU29 152 aa18.63■□□□□ 0.57
PSENEN-202ENST00000587708 CCDC66A2RUB6 948 aa18.63■□□□□ 0.57
PSENEN-202ENST00000587708 MMP8P22894 467 aa18.63■□□□□ 0.57
PSENEN-202ENST00000587708 ACLYP53396 1101 aa18.63■□□□□ 0.57
PSENEN-202ENST00000587708 RAD23BP54727 409 aa18.63■□□□□ 0.57
PSENEN-202ENST00000587708 ITGA7Q13683 1181 aa18.63■□□□□ 0.57
PSENEN-202ENST00000587708 PPP2R5EQ16537 467 aa18.63■□□□□ 0.57
PSENEN-202ENST00000587708 PLEKHA7Q6IQ23 1121 aa18.63■□□□□ 0.57
PSENEN-202ENST00000587708 WDR93Q6P2C0 686 aa18.63■□□□□ 0.57
PSENEN-202ENST00000587708 ARRDC4Q8NCT1 418 aa18.63■□□□□ 0.57
PSENEN-202ENST00000587708 HNRNPLLQ8WVV9 542 aaKnown RBP18.63■□□□□ 0.57
PSENEN-202ENST00000587708 ZNF560Q96MR9 790 aa18.63■□□□□ 0.57
PSENEN-202ENST00000587708 GLT1D1Q96MS3 346 aa18.63■□□□□ 0.57
PSENEN-202ENST00000587708 ZMAT2Q96NC0 199 aaKnown RBP18.63■□□□□ 0.57
PSENEN-202ENST00000587708 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.63■□□□□ 0.57
PSENEN-202ENST00000587708 PARP2Q9UGN5 583 aa18.63■□□□□ 0.57
PSENEN-202ENST00000587708 STRIP2Q9ULQ0 834 aa18.63■□□□□ 0.57
PSENEN-202ENST00000587708 ST3GAL5Q9UNP4 418 aa18.63■□□□□ 0.57
PSENEN-202ENST00000587708 MYO1FO00160 1098 aa18.62■□□□□ 0.57
PSENEN-202ENST00000587708 ERLIN1O75477 346 aa18.62■□□□□ 0.57
PSENEN-202ENST00000587708 CHRNA1P02708 482 aa18.62■□□□□ 0.57
PSENEN-202ENST00000587708 TFRCP02786 760 aaKnown RBP18.62■□□□□ 0.57
PSENEN-202ENST00000587708 ZSCAN20P17040 1043 aaPredicted RBP18.62■□□□□ 0.57
PSENEN-202ENST00000587708 CNGA2Q16280 664 aa18.62■□□□□ 0.57
PSENEN-202ENST00000587708 SCARA5Q6ZMJ2 495 aa18.62■□□□□ 0.57
PSENEN-202ENST00000587708 UNC93AQ86WB7 457 aa18.62■□□□□ 0.57
PSENEN-202ENST00000587708 NOA1Q8NC60 698 aaKnown RBP18.62■□□□□ 0.57
PSENEN-202ENST00000587708 PSMB7Q99436 277 aa18.62■□□□□ 0.57
PSENEN-202ENST00000587708 PLVAPQ9BX97 442 aa18.62■□□□□ 0.57
PSENEN-202ENST00000587708 ANKZF1Q9H8Y5 726 aa18.62■□□□□ 0.57
PSENEN-202ENST00000587708 SLC38A7Q9NVC3 462 aa18.62■□□□□ 0.57
PSENEN-202ENST00000587708 PACSIN2Q9UNF0 486 aaPredicted RBP18.62■□□□□ 0.57
PSENEN-202ENST00000587708 GRIN2DO15399 1336 aa18.61■□□□□ 0.57
PSENEN-202ENST00000587708 CCDC188H7C350 402 aa18.61■□□□□ 0.57
PSENEN-202ENST00000587708 PGRMC1O00264 195 aaKnown RBP18.61■□□□□ 0.57
PSENEN-202ENST00000587708 PIRO00625 290 aa18.61■□□□□ 0.57
PSENEN-202ENST00000587708 DDX3YO15523 660 aaKnown RBP18.61■□□□□ 0.57
PSENEN-202ENST00000587708 ATP8B1O43520 1251 aa18.61■□□□□ 0.57
PSENEN-202ENST00000587708 SKIP12755 728 aa18.61■□□□□ 0.57
PSENEN-202ENST00000587708 CTNNA2P26232 953 aa18.61■□□□□ 0.57
PSENEN-202ENST00000587708 RAB27AP51159 221 aa18.61■□□□□ 0.57
PSENEN-202ENST00000587708 MESDQ14696 234 aa18.61■□□□□ 0.57
PSENEN-202ENST00000587708 C9orf57Q5W0N0 161 aa18.61■□□□□ 0.57
PSENEN-202ENST00000587708 FBXO38Q6PIJ6 1188 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms