RNA–Protein interactions for RNA: ENST00000587697.1

TNFRSF11A-203, Transcript of TNF receptor superfamily member 11a, humanhuman

TSL 3

Gene TNFRSF11A, Length 528 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-203ENST00000587697 TMEM161AQ9NX61 479 aa12.76□□□□□ -0.37
TNFRSF11A-203ENST00000587697 R3HCC1Q9Y3T6 440 aaKnown RBP12.76□□□□□ -0.37
TNFRSF11A-203ENST00000587697 PATJQ8NI35 1801 aa12.76□□□□□ -0.37
TNFRSF11A-203ENST00000587697 ENPP3O14638 875 aa12.75□□□□□ -0.37
TNFRSF11A-203ENST00000587697 KIAA0355O15063 1070 aa12.75□□□□□ -0.37
TNFRSF11A-203ENST00000587697 CILPO75339 1184 aa12.75□□□□□ -0.37
TNFRSF11A-203ENST00000587697 CD58P19256 250 aa12.75□□□□□ -0.37
TNFRSF11A-203ENST00000587697 TNFAIP3P21580 790 aa12.75□□□□□ -0.37
TNFRSF11A-203ENST00000587697 RFC2P35250 354 aa12.75□□□□□ -0.37
TNFRSF11A-203ENST00000587697 MAGEA1P43355 309 aa12.75□□□□□ -0.37
TNFRSF11A-203ENST00000587697 TAF6P49848 677 aa12.75□□□□□ -0.37
TNFRSF11A-203ENST00000587697 CCL23P55773 120 aa12.75□□□□□ -0.37
TNFRSF11A-203ENST00000587697 TNNC1P63316 161 aa12.75□□□□□ -0.37
TNFRSF11A-203ENST00000587697 SV2CQ496J9 727 aa12.75□□□□□ -0.37
TNFRSF11A-203ENST00000587697 CLLU1OSQ5K130 101 aa12.75□□□□□ -0.37
TNFRSF11A-203ENST00000587697 ALKBH5Q6P6C2 394 aaKnown RBP12.75□□□□□ -0.37
TNFRSF11A-203ENST00000587697 LIMS2Q7Z4I7 341 aa12.75□□□□□ -0.37
TNFRSF11A-203ENST00000587697 RPUSD2Q8IZ73 545 aaKnown RBP12.75□□□□□ -0.37
TNFRSF11A-203ENST00000587697 TTC39CQ8N584 583 aa12.75□□□□□ -0.37
TNFRSF11A-203ENST00000587697 RNF169Q8NCN4 708 aa12.75□□□□□ -0.37
TNFRSF11A-203ENST00000587697 WHAMMQ8TF30 809 aa12.75□□□□□ -0.37
TNFRSF11A-203ENST00000587697 VWCEQ96DN2 955 aa12.75□□□□□ -0.37
TNFRSF11A-203ENST00000587697 C16orf45Q96MC5 204 aaPredicted RBP12.75□□□□□ -0.37
TNFRSF11A-203ENST00000587697 PCDHB18PQ96TA0 734 aa12.75□□□□□ -0.37
TNFRSF11A-203ENST00000587697 LACRTQ9GZZ8 138 aa12.75□□□□□ -0.37
TNFRSF11A-203ENST00000587697 LUC7LQ9NQ29 371 aaKnown RBP12.75□□□□□ -0.37
TNFRSF11A-203ENST00000587697 TMEM39AQ9NV64 488 aa12.75□□□□□ -0.37
TNFRSF11A-203ENST00000587697 GDAP2Q9NXN4 497 aa12.75□□□□□ -0.37
TNFRSF11A-203ENST00000587697 KIF2AO00139 706 aaPredicted RBP12.74□□□□□ -0.37
TNFRSF11A-203ENST00000587697 SPTLC1O15269 473 aa12.74□□□□□ -0.37
TNFRSF11A-203ENST00000587697 ABL1P00519 1130 aa12.74□□□□□ -0.37
TNFRSF11A-203ENST00000587697 CALCAP01258 141 aa12.74□□□□□ -0.37
TNFRSF11A-203ENST00000587697 MMEP08473 750 aa12.74□□□□□ -0.37
TNFRSF11A-203ENST00000587697 PAEPP09466 180 aa12.74□□□□□ -0.37
TNFRSF11A-203ENST00000587697 GZMAP12544 262 aa12.74□□□□□ -0.37
TNFRSF11A-203ENST00000587697 GNA15P30679 374 aa12.74□□□□□ -0.37
TNFRSF11A-203ENST00000587697 RPL9P32969 192 aaKnown RBP12.74□□□□□ -0.37
TNFRSF11A-203ENST00000587697 RAD23BP54727 409 aa12.74□□□□□ -0.37
TNFRSF11A-203ENST00000587697 CDH8P55286 799 aa12.74□□□□□ -0.37
TNFRSF11A-203ENST00000587697 PTPN14Q15678 1187 aa12.74□□□□□ -0.37
TNFRSF11A-203ENST00000587697 ARHGAP29Q52LW3 1261 aa12.74□□□□□ -0.37
TNFRSF11A-203ENST00000587697 CCDC122Q5T0U0 273 aa12.74□□□□□ -0.37
TNFRSF11A-203ENST00000587697 TAF3Q5VWG9 929 aa12.74□□□□□ -0.37
TNFRSF11A-203ENST00000587697 CRIPAKQ8N1N5 446 aa12.74□□□□□ -0.37
TNFRSF11A-203ENST00000587697 TXLNBQ8N3L3 684 aa12.74□□□□□ -0.37
TNFRSF11A-203ENST00000587697 ZSWIM1Q9BR11 485 aa12.74□□□□□ -0.37
TNFRSF11A-203ENST00000587697 PACSIN1Q9BY11 444 aa12.74□□□□□ -0.37
TNFRSF11A-203ENST00000587697 TSGA10Q9BZW7 698 aa12.74□□□□□ -0.37
TNFRSF11A-203ENST00000587697 LZTFL1Q9NQ48 299 aa12.74□□□□□ -0.37
TNFRSF11A-203ENST00000587697 TRIM10Q9UDY6 481 aa12.74□□□□□ -0.37
TNFRSF11A-203ENST00000587697 HMGXB4Q9UGU5 601 aa12.74□□□□□ -0.37
TNFRSF11A-203ENST00000587697 INTUQ9ULD6 942 aa12.74□□□□□ -0.37
TNFRSF11A-203ENST00000587697 TFR2Q9UP52 801 aa12.74□□□□□ -0.37
TNFRSF11A-203ENST00000587697 SNX9Q9Y5X1 595 aa12.74□□□□□ -0.37
TNFRSF11A-203ENST00000587697 NCANO14594 1321 aa12.73□□□□□ -0.37
TNFRSF11A-203ENST00000587697 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.73□□□□□ -0.37
TNFRSF11A-203ENST00000587697 BTNL10A8MVZ5 291 aa12.73□□□□□ -0.37
TNFRSF11A-203ENST00000587697 KPNA7A9QM74 516 aa12.73□□□□□ -0.37
TNFRSF11A-203ENST00000587697 KRT86O43790 486 aa12.73□□□□□ -0.37
TNFRSF11A-203ENST00000587697 TUBB4AP04350 444 aa12.73□□□□□ -0.37
TNFRSF11A-203ENST00000587697 LILRA4P59901 499 aa12.73□□□□□ -0.37
TNFRSF11A-203ENST00000587697 DSC1Q08554 894 aa12.73□□□□□ -0.37
TNFRSF11A-203ENST00000587697 KIF5AQ12840 1032 aa12.73□□□□□ -0.37
TNFRSF11A-203ENST00000587697 TUSC3Q13454 348 aa12.73□□□□□ -0.37
TNFRSF11A-203ENST00000587697 GLB1LQ6UWU2 654 aa12.73□□□□□ -0.37
TNFRSF11A-203ENST00000587697 TRIM72Q6ZMU5 477 aa12.73□□□□□ -0.37
TNFRSF11A-203ENST00000587697 SLC4A11Q8NBS3 891 aa12.73□□□□□ -0.37
TNFRSF11A-203ENST00000587697 UROC1Q96N76 676 aa12.73□□□□□ -0.37
TNFRSF11A-203ENST00000587697 TWNKQ96RR1 684 aa12.73□□□□□ -0.37
TNFRSF11A-203ENST00000587697 MRPL45Q9BRJ2 306 aaKnown RBP12.73□□□□□ -0.37
TNFRSF11A-203ENST00000587697 ELOVL4Q9GZR5 314 aa12.73□□□□□ -0.37
TNFRSF11A-203ENST00000587697 ISCUQ9H1K1 167 aa12.73□□□□□ -0.37
TNFRSF11A-203ENST00000587697 BARX2Q9UMQ3 279 aaPredicted RBP12.73□□□□□ -0.37
TNFRSF11A-203ENST00000587697 TRIM43BA6NCK2 446 aa12.72□□□□□ -0.37
TNFRSF11A-203ENST00000587697 PODXLO00592 558 aa12.72□□□□□ -0.37
TNFRSF11A-203ENST00000587697 THAP12O43422 761 aa12.72□□□□□ -0.37
TNFRSF11A-203ENST00000587697 TACC1O75410 805 aa12.72□□□□□ -0.37
TNFRSF11A-203ENST00000587697 TIMP1P01033 207 aa12.72□□□□□ -0.37
TNFRSF11A-203ENST00000587697 POMCP01189 267 aa12.72□□□□□ -0.37
TNFRSF11A-203ENST00000587697 CYP1A1P04798 512 aaPredicted RBP12.72□□□□□ -0.37
TNFRSF11A-203ENST00000587697 H2AFZP0C0S5 128 aa12.72□□□□□ -0.37
TNFRSF11A-203ENST00000587697 UNGP13051 313 aaPredicted RBP12.72□□□□□ -0.37
TNFRSF11A-203ENST00000587697 TNNT1P13805 278 aa12.72□□□□□ -0.37
TNFRSF11A-203ENST00000587697 AARSP49588 968 aaKnown RBP eCLIP12.72□□□□□ -0.37
TNFRSF11A-203ENST00000587697 CLCNKBP51801 687 aa12.72□□□□□ -0.37
TNFRSF11A-203ENST00000587697 ETF1P62495 437 aaKnown RBP12.72□□□□□ -0.37
TNFRSF11A-203ENST00000587697 UPP1Q16831 310 aa12.72□□□□□ -0.37
TNFRSF11A-203ENST00000587697 CLEC16AQ2KHT3 1053 aa12.72□□□□□ -0.37
TNFRSF11A-203ENST00000587697 SOWAHAQ2M3V2 549 aa12.72□□□□□ -0.37
TNFRSF11A-203ENST00000587697 NOMO2Q5JPE7 1267 aa12.72□□□□□ -0.37
TNFRSF11A-203ENST00000587697 CNKSR3Q6P9H4 555 aa12.72□□□□□ -0.37
TNFRSF11A-203ENST00000587697 H2AFVQ71UI9 128 aa12.72□□□□□ -0.37
TNFRSF11A-203ENST00000587697 TOP6BLQ8N6T0 577 aa12.72□□□□□ -0.37
TNFRSF11A-203ENST00000587697 C3orf58Q8NDZ4 430 aa12.72□□□□□ -0.37
TNFRSF11A-203ENST00000587697 URGCPQ8TCY9 931 aa12.72□□□□□ -0.37
TNFRSF11A-203ENST00000587697 KBTBD7Q8WVZ9 684 aa12.72□□□□□ -0.37
TNFRSF11A-203ENST00000587697 ZNF606Q8WXB4 792 aa12.72□□□□□ -0.37
TNFRSF11A-203ENST00000587697 TFAP2BQ92481 460 aa12.72□□□□□ -0.37
TNFRSF11A-203ENST00000587697 TRIM43Q96BQ3 446 aaPredicted RBP12.72□□□□□ -0.37
TNFRSF11A-203ENST00000587697 DDX27Q96GQ7 796 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms