RNA–Protein interactions for RNA: ENST00000587147.1

VAT1-204, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-204ENST00000587147 PTPRJQ12913 1337 aa18.21■□□□□ 0.51
VAT1-204ENST00000587147 ABLIM3O94929 683 aa18.2■□□□□ 0.5
VAT1-204ENST00000587147 MBD3O95983 291 aa18.2■□□□□ 0.5
VAT1-204ENST00000587147 HNRNPA1P09651 372 aaKnown RBP eCLIP18.2■□□□□ 0.5
VAT1-204ENST00000587147 KRT13P13646 458 aa18.2■□□□□ 0.5
VAT1-204ENST00000587147 ATICP31939 592 aa18.2■□□□□ 0.5
VAT1-204ENST00000587147 MTHFRP42898 656 aa18.2■□□□□ 0.5
VAT1-204ENST00000587147 KCNQ1P51787 676 aa18.2■□□□□ 0.5
VAT1-204ENST00000587147 SMARCB1Q12824 385 aa18.2■□□□□ 0.5
VAT1-204ENST00000587147 CTXN3Q4LDR2 81 aa18.2■□□□□ 0.5
VAT1-204ENST00000587147 CEP135Q66GS9 1140 aa18.2■□□□□ 0.5
VAT1-204ENST00000587147 OVOS1Q6IE37 1185 aa18.2■□□□□ 0.5
VAT1-204ENST00000587147 CCDC149Q6ZUS6 474 aa18.2■□□□□ 0.5
VAT1-204ENST00000587147 FAM186BQ8IYM0 893 aa18.2■□□□□ 0.5
VAT1-204ENST00000587147 TOP6BLQ8N6T0 577 aa18.2■□□□□ 0.5
VAT1-204ENST00000587147 KREMEN2Q8NCW0 462 aa18.2■□□□□ 0.5
VAT1-204ENST00000587147 RIPOR3Q96MK2 946 aa18.2■□□□□ 0.5
VAT1-204ENST00000587147 POP1Q99575 1024 aaKnown RBP18.2■□□□□ 0.5
VAT1-204ENST00000587147 NUP62CLQ9H1M0 184 aa18.2■□□□□ 0.5
VAT1-204ENST00000587147 VRTNQ9H8Y1 702 aa18.2■□□□□ 0.5
VAT1-204ENST00000587147 A0A0C4DFX4 3053 aa18.19■□□□□ 0.5
VAT1-204ENST00000587147 LRRIQ3A6PVS8 624 aaPredicted RBP18.19■□□□□ 0.5
VAT1-204ENST00000587147 CYB561D2O14569 222 aa18.19■□□□□ 0.5
VAT1-204ENST00000587147 AKAP3O75969 853 aa18.19■□□□□ 0.5
VAT1-204ENST00000587147 KRT19P08727 400 aa18.19■□□□□ 0.5
VAT1-204ENST00000587147 EPB41P11171 864 aaKnown RBP18.19■□□□□ 0.5
VAT1-204ENST00000587147 ATF2P15336 505 aa18.19■□□□□ 0.5
VAT1-204ENST00000587147 RPL17P18621 184 aaKnown RBP18.19■□□□□ 0.5
VAT1-204ENST00000587147 BMP6P22004 513 aa18.19■□□□□ 0.5
VAT1-204ENST00000587147 GTF2H1P32780 548 aa18.19■□□□□ 0.5
VAT1-204ENST00000587147 CASP4P49662 377 aa18.19■□□□□ 0.5
VAT1-204ENST00000587147 RBM10P98175 930 aaKnown RBP18.19■□□□□ 0.5
VAT1-204ENST00000587147 ROR1Q01973 937 aa18.19■□□□□ 0.5
VAT1-204ENST00000587147 BFSP1Q12934 665 aa18.19■□□□□ 0.5
VAT1-204ENST00000587147 LIN9Q5TKA1 542 aa18.19■□□□□ 0.5
VAT1-204ENST00000587147 LIMS2Q7Z4I7 341 aa18.19■□□□□ 0.5
VAT1-204ENST00000587147 GPR149Q86SP6 731 aa18.19■□□□□ 0.5
VAT1-204ENST00000587147 PALB2Q86YC2 1186 aa18.19■□□□□ 0.5
VAT1-204ENST00000587147 CEP63Q96MT8 703 aa18.19■□□□□ 0.5
VAT1-204ENST00000587147 HSFX1Q9UBD0 423 aa18.19■□□□□ 0.5
VAT1-204ENST00000587147 USP15Q9Y4E8 981 aaPredicted RBP18.19■□□□□ 0.5
VAT1-204ENST00000587147 PPP1R3GB7ZBB8 358 aa18.18■□□□□ 0.5
VAT1-204ENST00000587147 STX10O60499 249 aa18.18■□□□□ 0.5
VAT1-204ENST00000587147 HUS1O60921 280 aa18.18■□□□□ 0.5
VAT1-204ENST00000587147 ZMYND10O75800 440 aa18.18■□□□□ 0.5
VAT1-204ENST00000587147 VAMP7P51809 220 aa18.18■□□□□ 0.5
VAT1-204ENST00000587147 CBX2Q14781 532 aaPredicted RBP18.18■□□□□ 0.5
VAT1-204ENST00000587147 ZACNQ401N2 412 aa18.18■□□□□ 0.5
VAT1-204ENST00000587147 ATAT1Q5SQI0 421 aa18.18■□□□□ 0.5
VAT1-204ENST00000587147 RSPO2Q6UXX9 243 aaPredicted RBP18.18■□□□□ 0.5
VAT1-204ENST00000587147 TCEAL8Q8IYN2 117 aa18.18■□□□□ 0.5
VAT1-204ENST00000587147 THEM5Q8N1Q8 247 aa18.18■□□□□ 0.5
VAT1-204ENST00000587147 MLKLQ8NB16 471 aa18.18■□□□□ 0.5
VAT1-204ENST00000587147 PLEKHO2Q8TD55 490 aa18.18■□□□□ 0.5
VAT1-204ENST00000587147 TAF4BQ92750 862 aa18.18■□□□□ 0.5
VAT1-204ENST00000587147 SYAP1Q96A49 352 aaPredicted RBP18.18■□□□□ 0.5
VAT1-204ENST00000587147 HPDLQ96IR7 371 aa18.18■□□□□ 0.5
VAT1-204ENST00000587147 AFF4Q9UHB7 1163 aaKnown RBP18.18■□□□□ 0.5
VAT1-204ENST00000587147 NCOR1O75376 2440 aa18.18■□□□□ 0.5
VAT1-204ENST00000587147 SPDYE4A6NLX3 237 aa18.17■□□□□ 0.5
VAT1-204ENST00000587147 ADAM12O43184 909 aa18.17■□□□□ 0.5
VAT1-204ENST00000587147 C4BPAP04003 597 aaKnown RBP18.17■□□□□ 0.5
VAT1-204ENST00000587147 LHX1P48742 406 aa18.17■□□□□ 0.5
VAT1-204ENST00000587147 GPR17Q13304 367 aa18.17■□□□□ 0.5
VAT1-204ENST00000587147 TRPC3Q13507 836 aa18.17■□□□□ 0.5
VAT1-204ENST00000587147 CAMK4Q16566 473 aa18.17■□□□□ 0.5
VAT1-204ENST00000587147 CT47A1Q5JQC4 288 aaPredicted RBP18.17■□□□□ 0.5
VAT1-204ENST00000587147 LMBRD2Q68DH5 695 aaPredicted RBP18.17■□□□□ 0.5
VAT1-204ENST00000587147 ANKRD40Q6AI12 368 aa18.17■□□□□ 0.5
VAT1-204ENST00000587147 ADHFE1Q8IWW8 467 aa18.17■□□□□ 0.5
VAT1-204ENST00000587147 TMEM130Q8N3G9 435 aa18.17■□□□□ 0.5
VAT1-204ENST00000587147 ADAMTS19Q8TE59 1207 aa18.17■□□□□ 0.5
VAT1-204ENST00000587147 C2orf15Q8WU43 125 aaKnown RBP18.17■□□□□ 0.5
VAT1-204ENST00000587147 ZNF516Q92618 1163 aa18.17■□□□□ 0.5
VAT1-204ENST00000587147 METTL14Q9HCE5 456 aaKnown RBP18.17■□□□□ 0.5
VAT1-204ENST00000587147 WDR27A2RRH5 827 aa18.16■□□□□ 0.5
VAT1-204ENST00000587147 CD44P16070 742 aaKnown RBP18.16■□□□□ 0.5
VAT1-204ENST00000587147 PAK1Q13153 545 aa18.16■□□□□ 0.5
VAT1-204ENST00000587147 CLUL1Q15846 466 aa18.16■□□□□ 0.5
VAT1-204ENST00000587147 TDRD10Q5VZ19 366 aaKnown RBP18.16■□□□□ 0.5
VAT1-204ENST00000587147 TTI2Q6NXR4 508 aa18.16■□□□□ 0.5
VAT1-204ENST00000587147 FILIP1Q7Z7B0 1213 aa18.16■□□□□ 0.5
VAT1-204ENST00000587147 GLYCTKQ8IVS8 523 aa18.16■□□□□ 0.5
VAT1-204ENST00000587147 FAXDC2Q96IV6 333 aa18.16■□□□□ 0.5
VAT1-204ENST00000587147 PHF7Q9BWX1 381 aaPredicted RBP18.16■□□□□ 0.5
VAT1-204ENST00000587147 PRKD2Q9BZL6 878 aa18.16■□□□□ 0.5
VAT1-204ENST00000587147 DENND4AQ7Z401 1863 aa18.16■□□□□ 0.5
VAT1-204ENST00000587147 TTC28Q96AY4 2481 aa18.15■□□□□ 0.5
VAT1-204ENST00000587147 BIN1O00499 593 aa18.15■□□□□ 0.5
VAT1-204ENST00000587147 GABRDO14764 452 aa18.15■□□□□ 0.5
VAT1-204ENST00000587147 PHACTR2O75167 634 aa18.15■□□□□ 0.5
VAT1-204ENST00000587147 XYLBO75191 536 aa18.15■□□□□ 0.5
VAT1-204ENST00000587147 TACC1O75410 805 aa18.15■□□□□ 0.5
VAT1-204ENST00000587147 FGFR1OPO95684 399 aaKnown RBP18.15■□□□□ 0.5
VAT1-204ENST00000587147 GNA14O95837 355 aa18.15■□□□□ 0.5
VAT1-204ENST00000587147 C8AP07357 584 aa18.15■□□□□ 0.5
VAT1-204ENST00000587147 CPB1P15086 417 aa18.15■□□□□ 0.5
VAT1-204ENST00000587147 IL9P15248 144 aa18.15■□□□□ 0.5
VAT1-204ENST00000587147 ELF1P32519 619 aa18.15■□□□□ 0.5
VAT1-204ENST00000587147 PMS1P54277 932 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms