RNA–Protein interactions for RNA: ENST00000587110.1

AC055813.1-201, humanhuman

BASIC

Gene AC055813.1, Length 2,123 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055813.1-201ENST00000587110 FAM228BP0C875 321 aa12.91□□□□□ -0.34
AC055813.1-201ENST00000587110 ZBTB6Q15916 424 aa12.91□□□□□ -0.34
AC055813.1-201ENST00000587110 TRIM60Q495X7 471 aa12.91□□□□□ -0.34
AC055813.1-201ENST00000587110 LRRC31Q6UY01 552 aa12.91□□□□□ -0.34
AC055813.1-201ENST00000587110 ANKRD33Q7Z3H0 272 aa12.91□□□□□ -0.34
AC055813.1-201ENST00000587110 SLC35F6Q8N357 371 aa12.91□□□□□ -0.34
AC055813.1-201ENST00000587110 HPDLQ96IR7 371 aa12.91□□□□□ -0.34
AC055813.1-201ENST00000587110 PAWRQ96IZ0 340 aaKnown RBP12.91□□□□□ -0.34
AC055813.1-201ENST00000587110 GAD1Q99259 594 aa12.91□□□□□ -0.34
AC055813.1-201ENST00000587110 TUBGCP4Q9UGJ1 667 aa12.91□□□□□ -0.34
AC055813.1-201ENST00000587110 ITGA11Q9UKX5 1188 aa12.91□□□□□ -0.34
AC055813.1-201ENST00000587110 DERAQ9Y315 318 aa12.91□□□□□ -0.34
AC055813.1-201ENST00000587110 REXO2Q9Y3B8 237 aaKnown RBP12.91□□□□□ -0.34
AC055813.1-201ENST00000587110 A0A0U1RQF3 1178 aa12.9□□□□□ -0.34
AC055813.1-201ENST00000587110 ZNF263O14978 683 aa12.9□□□□□ -0.34
AC055813.1-201ENST00000587110 WEE2P0C1S8 567 aa12.9□□□□□ -0.34
AC055813.1-201ENST00000587110 TBXAS1P24557 533 aaPredicted RBP12.9□□□□□ -0.34
AC055813.1-201ENST00000587110 FAAP100Q0VG06 881 aa12.9□□□□□ -0.34
AC055813.1-201ENST00000587110 DSC3Q14574 896 aa12.9□□□□□ -0.34
AC055813.1-201ENST00000587110 KIAA1328Q86T90 577 aa12.9□□□□□ -0.34
AC055813.1-201ENST00000587110 SLC47A2Q86VL8 602 aa12.9□□□□□ -0.34
AC055813.1-201ENST00000587110 VPS36Q86VN1 386 aa12.9□□□□□ -0.34
AC055813.1-201ENST00000587110 BEST2Q8NFU1 509 aa12.9□□□□□ -0.34
AC055813.1-201ENST00000587110 CXorf38Q8TB03 319 aa12.9□□□□□ -0.34
AC055813.1-201ENST00000587110 TMEM106CQ9BVX2 250 aa12.9□□□□□ -0.34
AC055813.1-201ENST00000587110 TFR2Q9UP52 801 aa12.9□□□□□ -0.34
AC055813.1-201ENST00000587110 RHOXF2BP0C7M4 288 aa12.89□□□□□ -0.35
AC055813.1-201ENST00000587110 COL6A1P12109 1028 aa12.89□□□□□ -0.35
AC055813.1-201ENST00000587110 KCNE1P15382 129 aa12.89□□□□□ -0.35
AC055813.1-201ENST00000587110 CD58P19256 250 aa12.89□□□□□ -0.35
AC055813.1-201ENST00000587110 HOXD11P31277 338 aaPredicted RBP12.89□□□□□ -0.35
AC055813.1-201ENST00000587110 MLH1P40692 756 aa12.89□□□□□ -0.35
AC055813.1-201ENST00000587110 AFF1P51825 1210 aaKnown RBP12.89□□□□□ -0.35
AC055813.1-201ENST00000587110 GTF2A1P52655 376 aaPredicted RBP12.89□□□□□ -0.35
AC055813.1-201ENST00000587110 AMPD2Q01433 879 aa12.89□□□□□ -0.35
AC055813.1-201ENST00000587110 SLC18A3Q16572 532 aa12.89□□□□□ -0.35
AC055813.1-201ENST00000587110 XKR4Q5GH76 650 aa12.89□□□□□ -0.35
AC055813.1-201ENST00000587110 ZNF667Q5HYK9 610 aa12.89□□□□□ -0.35
AC055813.1-201ENST00000587110 TMEM270Q6UE05 265 aa12.89□□□□□ -0.35
AC055813.1-201ENST00000587110 SCARA5Q6ZMJ2 495 aa12.89□□□□□ -0.35
AC055813.1-201ENST00000587110 AGMOQ6ZNB7 445 aa12.89□□□□□ -0.35
AC055813.1-201ENST00000587110 GLYCTKQ8IVS8 523 aa12.89□□□□□ -0.35
AC055813.1-201ENST00000587110 TAF4BQ92750 862 aa12.89□□□□□ -0.35
AC055813.1-201ENST00000587110 RPGRIP1Q96KN7 1286 aa12.89□□□□□ -0.35
AC055813.1-201ENST00000587110 RHOXF2Q9BQY4 288 aa12.89□□□□□ -0.35
AC055813.1-201ENST00000587110 PPP1R12CQ9BZL4 782 aa12.89□□□□□ -0.35
AC055813.1-201ENST00000587110 NIF3L1Q9GZT8 377 aa12.89□□□□□ -0.35
AC055813.1-201ENST00000587110 HIPK3Q9H422 1215 aa12.89□□□□□ -0.35
AC055813.1-201ENST00000587110 FAM204AQ9H8W3 233 aa12.89□□□□□ -0.35
AC055813.1-201ENST00000587110 SEPT11Q9NVA2 429 aaKnown RBP12.89□□□□□ -0.35
AC055813.1-201ENST00000587110 GEMIN8Q9NWZ8 242 aaKnown RBP12.89□□□□□ -0.35
AC055813.1-201ENST00000587110 UBQLN1Q9UMX0 589 aaKnown RBP12.89□□□□□ -0.35
AC055813.1-201ENST00000587110 ATP11BQ9Y2G3 1177 aa12.89□□□□□ -0.35
AC055813.1-201ENST00000587110 JRKLQ9Y4A0 524 aa12.89□□□□□ -0.35
AC055813.1-201ENST00000587110 PCDHB4Q9Y5E5 795 aa12.89□□□□□ -0.35
AC055813.1-201ENST00000587110 PCDHA13Q9Y5I0 950 aa12.89□□□□□ -0.35
AC055813.1-201ENST00000587110 ARL5CA6NH57 179 aa12.89□□□□□ -0.35
AC055813.1-201ENST00000587110 PITPNM1O00562 1244 aa12.89□□□□□ -0.35
AC055813.1-201ENST00000587110 NBNO60934 754 aa12.89□□□□□ -0.35
AC055813.1-201ENST00000587110 ZNF623O75123 536 aa12.89□□□□□ -0.35
AC055813.1-201ENST00000587110 ABL1P00519 1130 aa12.89□□□□□ -0.35
AC055813.1-201ENST00000587110 RAB27AP51159 221 aa12.89□□□□□ -0.35
AC055813.1-201ENST00000587110 MYO1EQ12965 1108 aa12.89□□□□□ -0.35
AC055813.1-201ENST00000587110 RTN4RL1Q86UN2 441 aaPredicted RBP12.89□□□□□ -0.35
AC055813.1-201ENST00000587110 SLC20A1Q8WUM9 679 aa12.89□□□□□ -0.35
AC055813.1-201ENST00000587110 JAKMIP2Q96AA8 810 aa12.89□□□□□ -0.35
AC055813.1-201ENST00000587110 TRAIPQ9BWF2 469 aa12.89□□□□□ -0.35
AC055813.1-201ENST00000587110 POLIQ9UNA4 740 aa12.89□□□□□ -0.35
AC055813.1-201ENST00000587110 FAM170AA1A519 330 aa12.88□□□□□ -0.35
AC055813.1-201ENST00000587110 TARSL2A2RTX5 802 aaKnown RBP12.88□□□□□ -0.35
AC055813.1-201ENST00000587110 PTGESO14684 152 aa12.88□□□□□ -0.35
AC055813.1-201ENST00000587110 RNF40O75150 1001 aa12.88□□□□□ -0.35
AC055813.1-201ENST00000587110 LCA5LO95447 670 aa12.88□□□□□ -0.35
AC055813.1-201ENST00000587110 CALCAP01258 141 aa12.88□□□□□ -0.35
AC055813.1-201ENST00000587110 ACO1P21399 889 aaKnown RBP12.88□□□□□ -0.35
AC055813.1-201ENST00000587110 TNFAIP3P21580 790 aa12.88□□□□□ -0.35
AC055813.1-201ENST00000587110 ATICP31939 592 aa12.88□□□□□ -0.35
AC055813.1-201ENST00000587110 MAGEA1P43355 309 aa12.88□□□□□ -0.35
AC055813.1-201ENST00000587110 CDH8P55286 799 aa12.88□□□□□ -0.35
AC055813.1-201ENST00000587110 CCL23P55773 120 aa12.88□□□□□ -0.35
AC055813.1-201ENST00000587110 ZNF394Q53GI3 561 aa12.88□□□□□ -0.35
AC055813.1-201ENST00000587110 DNAJC21Q5F1R6 531 aaKnown RBP12.88□□□□□ -0.35
AC055813.1-201ENST00000587110 MRPL10Q7Z7H8 261 aaKnown RBP12.88□□□□□ -0.35
AC055813.1-201ENST00000587110 PACS2Q86VP3 889 aa12.88□□□□□ -0.35
AC055813.1-201ENST00000587110 GSTCDQ8NEC7 633 aa12.88□□□□□ -0.35
AC055813.1-201ENST00000587110 DBF4BQ8NFT6 615 aa12.88□□□□□ -0.35
AC055813.1-201ENST00000587110 SCLYQ96I15 445 aa12.88□□□□□ -0.35
AC055813.1-201ENST00000587110 TOX2Q96NM4 488 aa12.88□□□□□ -0.35
AC055813.1-201ENST00000587110 RPS6KC1Q96S38 1066 aa12.88□□□□□ -0.35
AC055813.1-201ENST00000587110 MMS19Q96T76 1030 aa12.88□□□□□ -0.35
AC055813.1-201ENST00000587110 AGPAT1Q99943 283 aa12.88□□□□□ -0.35
AC055813.1-201ENST00000587110 GOLGA2P5Q9HBQ8 144 aa12.88□□□□□ -0.35
AC055813.1-201ENST00000587110 CISHQ9NSE2 258 aa12.88□□□□□ -0.35
AC055813.1-201ENST00000587110 KIAA0100Q14667 2235 aaKnown RBP12.88□□□□□ -0.35
AC055813.1-201ENST00000587110 FRMPD3Q5JV73 1810 aa12.88□□□□□ -0.35
AC055813.1-201ENST00000587110 PPEF2O14830 753 aa12.88□□□□□ -0.35
AC055813.1-201ENST00000587110 XPOTO43592 962 aaKnown RBP12.88□□□□□ -0.35
AC055813.1-201ENST00000587110 SKIP12755 728 aa12.88□□□□□ -0.35
AC055813.1-201ENST00000587110 CYP11B1P15538 503 aa12.88□□□□□ -0.35
AC055813.1-201ENST00000587110 CYP2C18P33260 490 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms