RNA–Protein interactions for RNA: ENST00000587062.1

VAT1-203, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-203ENST00000587062 EFCAB13Q8IY85 973 aa21.87■■□□□ 1.09
VAT1-203ENST00000587062 CSGALNACT2Q8N6G5 542 aa21.87■■□□□ 1.09
VAT1-203ENST00000587062 LRRC52Q8N7C0 313 aa21.87■■□□□ 1.09
VAT1-203ENST00000587062 FSIP1Q8NA03 581 aa21.87■■□□□ 1.09
VAT1-203ENST00000587062 XXYLT1Q8NBI6 393 aa21.87■■□□□ 1.09
VAT1-203ENST00000587062 PDE11AQ9HCR9 933 aa21.87■■□□□ 1.09
VAT1-203ENST00000587062 AGPAT3Q9NRZ7 376 aa21.87■■□□□ 1.09
VAT1-203ENST00000587062 AGAP1Q9UPQ3 857 aa21.87■■□□□ 1.09
VAT1-203ENST00000587062 ARIH1Q9Y4X5 557 aaPredicted RBP21.87■■□□□ 1.09
VAT1-203ENST00000587062 INSL5Q9Y5Q6 135 aa21.87■■□□□ 1.09
VAT1-203ENST00000587062 MUC3AQ02505 3323 aa21.87■■□□□ 1.09
VAT1-203ENST00000587062 PPEF2O14830 753 aa21.86■■□□□ 1.09
VAT1-203ENST00000587062 HUS1O60921 280 aa21.86■■□□□ 1.09
VAT1-203ENST00000587062 ITGB3P05106 788 aa21.86■■□□□ 1.09
VAT1-203ENST00000587062 KRT19P08727 400 aa21.86■■□□□ 1.09
VAT1-203ENST00000587062 CASP1P29466 404 aa21.86■■□□□ 1.09
VAT1-203ENST00000587062 ALDH1A3P47895 512 aa21.86■■□□□ 1.09
VAT1-203ENST00000587062 BMT2Q1RMZ1 405 aa21.86■■□□□ 1.09
VAT1-203ENST00000587062 CYP4A22Q5TCH4 519 aa21.86■■□□□ 1.09
VAT1-203ENST00000587062 MTSS1LQ765P7 747 aa21.86■■□□□ 1.09
VAT1-203ENST00000587062 GRAMD1CQ8IYS0 662 aa21.86■■□□□ 1.09
VAT1-203ENST00000587062 LEMD2Q8NC56 503 aa21.86■■□□□ 1.09
VAT1-203ENST00000587062 GLIS3Q8NEA6 775 aa21.86■■□□□ 1.09
VAT1-203ENST00000587062 SCFD1Q8WVM8 642 aa21.86■■□□□ 1.09
VAT1-203ENST00000587062 CDH7Q9ULB5 785 aa21.86■■□□□ 1.09
VAT1-203ENST00000587062 MRPS23Q9Y3D9 190 aaKnown RBP21.86■■□□□ 1.09
VAT1-203ENST00000587062 ANK1P16157 1881 aa21.86■■□□□ 1.09
VAT1-203ENST00000587062 FAM237AA0A1B0GTK4 181 aa21.85■■□□□ 1.09
VAT1-203ENST00000587062 POLR2BP30876 1174 aaKnown RBP21.85■■□□□ 1.09
VAT1-203ENST00000587062 NDUFA8P51970 172 aa21.85■■□□□ 1.09
VAT1-203ENST00000587062 SNRNP35Q16560 246 aaKnown RBP21.85■■□□□ 1.09
VAT1-203ENST00000587062 KMT5BQ4FZB7 885 aa21.85■■□□□ 1.09
VAT1-203ENST00000587062 RNF19BQ6ZMZ0 732 aa21.85■■□□□ 1.09
VAT1-203ENST00000587062 MYADMQ96S97 322 aa21.85■■□□□ 1.09
VAT1-203ENST00000587062 DNMT3BQ9UBC3 853 aaKnown RBP21.85■■□□□ 1.09
VAT1-203ENST00000587062 CLIC2O15247 247 aa21.84■■□□□ 1.09
VAT1-203ENST00000587062 SPTLC1O15269 473 aa21.84■■□□□ 1.09
VAT1-203ENST00000587062 TNNI1P19237 187 aa21.84■■□□□ 1.09
VAT1-203ENST00000587062 CYP2J2P51589 502 aa21.84■■□□□ 1.09
VAT1-203ENST00000587062 EPHB3P54753 998 aa21.84■■□□□ 1.09
VAT1-203ENST00000587062 HFE2Q6ZVN8 426 aa21.84■■□□□ 1.09
VAT1-203ENST00000587062 PDZD4Q76G19 769 aaPredicted RBP21.84■■□□□ 1.09
VAT1-203ENST00000587062 WDR49Q8IV35 697 aa21.84■■□□□ 1.09
VAT1-203ENST00000587062 C12orf56Q8IXR9 622 aa21.84■■□□□ 1.09
VAT1-203ENST00000587062 DCP1BQ8IZD4 617 aaKnown RBP21.84■■□□□ 1.09
VAT1-203ENST00000587062 TMEM86AQ8N2M4 240 aa21.84■■□□□ 1.09
VAT1-203ENST00000587062 RDH13Q8NBN7 331 aa21.84■■□□□ 1.09
VAT1-203ENST00000587062 FEZF2Q8TBJ5 459 aa21.84■■□□□ 1.09
VAT1-203ENST00000587062 C2orf15Q8WU43 125 aaKnown RBP21.84■■□□□ 1.09
VAT1-203ENST00000587062 KCNH6Q9H252 994 aa21.84■■□□□ 1.09
VAT1-203ENST00000587062 MFSD1Q9H3U5 465 aa21.84■■□□□ 1.09
VAT1-203ENST00000587062 AVENQ9NQS1 362 aaPredicted RBP21.84■■□□□ 1.09
VAT1-203ENST00000587062 INTS13Q9NVM9 706 aa21.84■■□□□ 1.09
VAT1-203ENST00000587062 HSFX1Q9UBD0 423 aa21.84■■□□□ 1.09
VAT1-203ENST00000587062 MYO10Q9HD67 2058 aa21.84■■□□□ 1.09
VAT1-203ENST00000587062 TCHHQ07283 1943 aa21.84■■□□□ 1.09
VAT1-203ENST00000587062 TGFB1I1O43294 461 aa21.83■■□□□ 1.09
VAT1-203ENST00000587062 EXOC3O60645 756 aa21.83■■□□□ 1.09
VAT1-203ENST00000587062 ZNF202O95125 648 aa21.83■■□□□ 1.09
VAT1-203ENST00000587062 SEC24AO95486 1093 aa21.83■■□□□ 1.09
VAT1-203ENST00000587062 RPN1P04843 607 aaKnown RBP21.83■■□□□ 1.09
VAT1-203ENST00000587062 RHOP08100 348 aa21.83■■□□□ 1.09
VAT1-203ENST00000587062 HOXD13P35453 343 aa21.83■■□□□ 1.09
VAT1-203ENST00000587062 TUFMP49411 452 aaKnown RBP21.83■■□□□ 1.09
VAT1-203ENST00000587062 TSPY1Q01534 308 aa21.83■■□□□ 1.09
VAT1-203ENST00000587062 BFSP1Q12934 665 aa21.83■■□□□ 1.09
VAT1-203ENST00000587062 KRBA2Q6ZNG9 492 aa21.83■■□□□ 1.09
VAT1-203ENST00000587062 CBWD2Q8IUF1 395 aa21.83■■□□□ 1.09
VAT1-203ENST00000587062 FBXL6Q8N531 539 aa21.83■■□□□ 1.09
VAT1-203ENST00000587062 C1orf127Q8N9H9 656 aa21.83■■□□□ 1.09
VAT1-203ENST00000587062 ZSWIM2Q8NEG5 633 aa21.83■■□□□ 1.09
VAT1-203ENST00000587062 SPATA18Q8TC71 538 aa21.83■■□□□ 1.09
VAT1-203ENST00000587062 PRRX2Q99811 253 aa21.83■■□□□ 1.09
VAT1-203ENST00000587062 CORO1BQ9BR76 489 aa21.83■■□□□ 1.09
VAT1-203ENST00000587062 HOOK1Q9UJC3 728 aaKnown RBP21.83■■□□□ 1.09
VAT1-203ENST00000587062 FBXL21Q9UKT6 434 aa21.83■■□□□ 1.09
VAT1-203ENST00000587062 C5orf42Q9H799 3197 aa21.83■■□□□ 1.08
VAT1-203ENST00000587062 N4BP1O75113 896 aaKnown RBP21.82■■□□□ 1.08
VAT1-203ENST00000587062 NTHL1P78549 312 aa21.82■■□□□ 1.08
VAT1-203ENST00000587062 MYL7Q01449 175 aa21.82■■□□□ 1.08
VAT1-203ENST00000587062 TWF1Q12792 350 aa21.82■■□□□ 1.08
VAT1-203ENST00000587062 TMEM130Q8N3G9 435 aa21.82■■□□□ 1.08
VAT1-203ENST00000587062 FGF13Q92913 245 aa21.82■■□□□ 1.08
VAT1-203ENST00000587062 PGLYRP2Q96PD5 576 aa21.82■■□□□ 1.08
VAT1-203ENST00000587062 MTMR12Q9C0I1 747 aa21.82■■□□□ 1.08
VAT1-203ENST00000587062 ASAH2Q9NR71 780 aa21.82■■□□□ 1.08
VAT1-203ENST00000587062 HCFC1R1Q9NWW0 138 aa21.82■■□□□ 1.08
VAT1-203ENST00000587062 GDE1Q9NZC3 331 aa21.82■■□□□ 1.08
VAT1-203ENST00000587062 DUSP12Q9UNI6 340 aa21.82■■□□□ 1.08
VAT1-203ENST00000587062 ASB3Q9Y575 518 aa21.82■■□□□ 1.08
VAT1-203ENST00000587062 CALUO43852 315 aaPredicted RBP21.81■■□□□ 1.08
VAT1-203ENST00000587062 KLRC4O43908 158 aa21.81■■□□□ 1.08
VAT1-203ENST00000587062 MICAL2O94851 1124 aa21.81■■□□□ 1.08
VAT1-203ENST00000587062 DLATP10515 647 aaKnown RBP21.81■■□□□ 1.08
VAT1-203ENST00000587062 LHX1P48742 406 aa21.81■■□□□ 1.08
VAT1-203ENST00000587062 STK4Q13043 487 aa21.81■■□□□ 1.08
VAT1-203ENST00000587062 DUSP4Q13115 394 aa21.81■■□□□ 1.08
VAT1-203ENST00000587062 PSMD6Q15008 389 aa21.81■■□□□ 1.08
VAT1-203ENST00000587062 WSCD1Q658N2 575 aa21.81■■□□□ 1.08
VAT1-203ENST00000587062 DPH6Q7L8W6 267 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms