RNA–Protein interactions for RNA: ENST00000586457.1

CLIP3-203, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 1 (best)

Gene CLIP3, Length 433 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-203ENST00000586457 DCP1BQ8IZD4 617 aaKnown RBP11.73□□□□□ -0.53
CLIP3-203ENST00000586457 FAM200AQ8TCP9 573 aa11.73□□□□□ -0.53
CLIP3-203ENST00000586457 EDAQ92838 391 aa11.73□□□□□ -0.53
CLIP3-203ENST00000586457 GTPBP4Q9BZE4 634 aaKnown RBP11.73□□□□□ -0.53
CLIP3-203ENST00000586457 INTS13Q9NVM9 706 aa11.73□□□□□ -0.53
CLIP3-203ENST00000586457 CHMP5Q9NZZ3 219 aa11.73□□□□□ -0.53
CLIP3-203ENST00000586457 AFF4Q9UHB7 1163 aaKnown RBP11.73□□□□□ -0.53
CLIP3-203ENST00000586457 SORCS3Q9UPU3 1222 aa11.73□□□□□ -0.53
CLIP3-203ENST00000586457 ZFP37Q9Y6Q3 630 aaPredicted RBP11.73□□□□□ -0.53
CLIP3-203ENST00000586457 WDR27A2RRH5 827 aa11.72□□□□□ -0.53
CLIP3-203ENST00000586457 PDXKO00764 312 aa11.72□□□□□ -0.53
CLIP3-203ENST00000586457 ZNF197O14709 1029 aa11.72□□□□□ -0.53
CLIP3-203ENST00000586457 PPEF2O14830 753 aa11.72□□□□□ -0.53
CLIP3-203ENST00000586457 TGFB1I1O43294 461 aa11.72□□□□□ -0.53
CLIP3-203ENST00000586457 HOXD13P35453 343 aa11.72□□□□□ -0.53
CLIP3-203ENST00000586457 MYL7Q01449 175 aa11.72□□□□□ -0.53
CLIP3-203ENST00000586457 EHHADHQ08426 723 aa11.72□□□□□ -0.53
CLIP3-203ENST00000586457 DPYDQ12882 1025 aa11.72□□□□□ -0.53
CLIP3-203ENST00000586457 MYBPC2Q14324 1141 aa11.72□□□□□ -0.53
CLIP3-203ENST00000586457 PTPN21Q16825 1174 aa11.72□□□□□ -0.53
CLIP3-203ENST00000586457 PABPC1LQ4VXU2 614 aaKnown RBP11.72□□□□□ -0.53
CLIP3-203ENST00000586457 CEP135Q66GS9 1140 aa11.72□□□□□ -0.53
CLIP3-203ENST00000586457 EFCAB13Q8IY85 973 aa11.72□□□□□ -0.53
CLIP3-203ENST00000586457 TCEAL8Q8IYN2 117 aa11.72□□□□□ -0.53
CLIP3-203ENST00000586457 TMEM86AQ8N2M4 240 aa11.72□□□□□ -0.53
CLIP3-203ENST00000586457 LRRC52Q8N7C0 313 aa11.72□□□□□ -0.53
CLIP3-203ENST00000586457 ZSWIM2Q8NEG5 633 aa11.72□□□□□ -0.53
CLIP3-203ENST00000586457 SMARCE1Q969G3 411 aa11.72□□□□□ -0.53
CLIP3-203ENST00000586457 HPDLQ96IR7 371 aa11.72□□□□□ -0.53
CLIP3-203ENST00000586457 PGLYRP2Q96PD5 576 aa11.72□□□□□ -0.53
CLIP3-203ENST00000586457 MMS19Q96T76 1030 aa11.72□□□□□ -0.53
CLIP3-203ENST00000586457 CORO1BQ9BR76 489 aa11.72□□□□□ -0.53
CLIP3-203ENST00000586457 MTMR12Q9C0I1 747 aa11.72□□□□□ -0.53
CLIP3-203ENST00000586457 GOLPH3LQ9H4A5 285 aa11.72□□□□□ -0.53
CLIP3-203ENST00000586457 IGSF9Q9P2J2 1179 aa11.72□□□□□ -0.53
CLIP3-203ENST00000586457 MAPK8IP1Q9UQF2 711 aa11.72□□□□□ -0.53
CLIP3-203ENST00000586457 MRPS23Q9Y3D9 190 aaKnown RBP11.72□□□□□ -0.53
CLIP3-203ENST00000586457 SNX9Q9Y5X1 595 aa11.72□□□□□ -0.53
CLIP3-203ENST00000586457 FAM86C2PA6NEL3 165 aa11.71□□□□□ -0.53
CLIP3-203ENST00000586457 SPTLC1O15269 473 aa11.71□□□□□ -0.53
CLIP3-203ENST00000586457 KLRC4O43908 158 aa11.71□□□□□ -0.53
CLIP3-203ENST00000586457 GPR37L1O60883 481 aa11.71□□□□□ -0.53
CLIP3-203ENST00000586457 RHOBTB3O94955 611 aa11.71□□□□□ -0.53
CLIP3-203ENST00000586457 KRT13P13646 458 aa11.71□□□□□ -0.53
CLIP3-203ENST00000586457 RFX1P22670 979 aa11.71□□□□□ -0.53
CLIP3-203ENST00000586457 TUFMP49411 452 aaKnown RBP11.71□□□□□ -0.53
CLIP3-203ENST00000586457 AARSP49588 968 aaKnown RBP eCLIP11.71□□□□□ -0.53
CLIP3-203ENST00000586457 AP3M2P53677 418 aa11.71□□□□□ -0.53
CLIP3-203ENST00000586457 TNNC1P63316 161 aa11.71□□□□□ -0.53
CLIP3-203ENST00000586457 ZXDAP98168 799 aa11.71□□□□□ -0.53
CLIP3-203ENST00000586457 CYP24A1Q07973 514 aa11.71□□□□□ -0.53
CLIP3-203ENST00000586457 SMARCB1Q12824 385 aa11.71□□□□□ -0.53
CLIP3-203ENST00000586457 GPR17Q13304 367 aa11.71□□□□□ -0.53
CLIP3-203ENST00000586457 BIRC3Q13489 604 aa11.71□□□□□ -0.53
CLIP3-203ENST00000586457 STIM1Q13586 685 aa11.71□□□□□ -0.53
CLIP3-203ENST00000586457 KCNB1Q14721 858 aa11.71□□□□□ -0.53
CLIP3-203ENST00000586457 VEPH1Q14D04 833 aa11.71□□□□□ -0.53
CLIP3-203ENST00000586457 PSMD6Q15008 389 aa11.71□□□□□ -0.53
CLIP3-203ENST00000586457 SLC39A12Q504Y0 691 aa11.71□□□□□ -0.53
CLIP3-203ENST00000586457 LMBRD2Q68DH5 695 aaPredicted RBP11.71□□□□□ -0.53
CLIP3-203ENST00000586457 RNF19BQ6ZMZ0 732 aa11.71□□□□□ -0.53
CLIP3-203ENST00000586457 PDZD4Q76G19 769 aaPredicted RBP11.71□□□□□ -0.53
CLIP3-203ENST00000586457 C12orf56Q8IXR9 622 aa11.71□□□□□ -0.53
CLIP3-203ENST00000586457 TMEM130Q8N3G9 435 aa11.71□□□□□ -0.53
CLIP3-203ENST00000586457 C1orf127Q8N9H9 656 aa11.71□□□□□ -0.53
CLIP3-203ENST00000586457 KHSRPQ92945 711 aaKnown RBP eCLIP11.71□□□□□ -0.53
CLIP3-203ENST00000586457 NXPE3Q969Y0 559 aa11.71□□□□□ -0.53
CLIP3-203ENST00000586457 PBXIP1Q96AQ6 731 aa11.71□□□□□ -0.53
CLIP3-203ENST00000586457 ZNF707Q96C28 371 aaPredicted RBP11.71□□□□□ -0.53
CLIP3-203ENST00000586457 MFSD14AQ96MC6 490 aa11.71□□□□□ -0.53
CLIP3-203ENST00000586457 TSG101Q99816 390 aa11.71□□□□□ -0.53
CLIP3-203ENST00000586457 MFSD1Q9H3U5 465 aa11.71□□□□□ -0.53
CLIP3-203ENST00000586457 FBXL21Q9UKT6 434 aa11.71□□□□□ -0.53
CLIP3-203ENST00000586457 INSL5Q9Y5Q6 135 aa11.71□□□□□ -0.53
CLIP3-203ENST00000586457 TTC28Q96AY4 2481 aa11.71□□□□□ -0.53
CLIP3-203ENST00000586457 VCANP13611 3396 aa11.71□□□□□ -0.54
CLIP3-203ENST00000586457 PRR33A8MZF0 331 aa11.7□□□□□ -0.54
CLIP3-203ENST00000586457 STK25O00506 426 aa11.7□□□□□ -0.54
CLIP3-203ENST00000586457 TBC1D4O60343 1298 aa11.7□□□□□ -0.54
CLIP3-203ENST00000586457 NR3C1P04150 777 aa11.7□□□□□ -0.54
CLIP3-203ENST00000586457 CYP11A1P05108 521 aa11.7□□□□□ -0.54
CLIP3-203ENST00000586457 OR4Q2P0C623 313 aa11.7□□□□□ -0.54
CLIP3-203ENST00000586457 PRR29P0C7W0 189 aa11.7□□□□□ -0.54
CLIP3-203ENST00000586457 TRIM21P19474 475 aaKnown RBP11.7□□□□□ -0.54
CLIP3-203ENST00000586457 LHX1P48742 406 aa11.7□□□□□ -0.54
CLIP3-203ENST00000586457 TWF1Q12792 350 aa11.7□□□□□ -0.54
CLIP3-203ENST00000586457 DUSP4Q13115 394 aa11.7□□□□□ -0.54
CLIP3-203ENST00000586457 PNOCQ13519 176 aa11.7□□□□□ -0.54
CLIP3-203ENST00000586457 TDGQ13569 410 aa11.7□□□□□ -0.54
CLIP3-203ENST00000586457 MGAT5BQ3V5L5 792 aa11.7□□□□□ -0.54
CLIP3-203ENST00000586457 WSCD1Q658N2 575 aa11.7□□□□□ -0.54
CLIP3-203ENST00000586457 TRIM67Q6ZTA4 783 aa11.7□□□□□ -0.54
CLIP3-203ENST00000586457 MTSS1LQ765P7 747 aa11.7□□□□□ -0.54
CLIP3-203ENST00000586457 TRAPPC11Q7Z392 1133 aa11.7□□□□□ -0.54
CLIP3-203ENST00000586457 ITIH5Q86UX2 942 aa11.7□□□□□ -0.54
CLIP3-203ENST00000586457 SUGP1Q8IWZ8 645 aaKnown RBP11.7□□□□□ -0.54
CLIP3-203ENST00000586457 FMR1NBQ8N0W7 255 aaPredicted RBP11.7□□□□□ -0.54
CLIP3-203ENST00000586457 KIAA0895Q8NCT3 520 aa11.7□□□□□ -0.54
CLIP3-203ENST00000586457 CCDC150Q8NCX0 1101 aa11.7□□□□□ -0.54
CLIP3-203ENST00000586457 C2orf15Q8WU43 125 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms