RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 NT5C1B-RDH14C9J2C7 533 aa13.57□□□□□ -0.24
VMP1-202ENST00000585847 NRP1O14786 923 aa13.57□□□□□ -0.24
VMP1-202ENST00000585847 TNNC2P02585 160 aa13.57□□□□□ -0.24
VMP1-202ENST00000585847 C4BPAP04003 597 aaKnown RBP13.57□□□□□ -0.24
VMP1-202ENST00000585847 ITGB1P05556 798 aa13.57□□□□□ -0.24
VMP1-202ENST00000585847 CCDC175P0C221 793 aa13.57□□□□□ -0.24
VMP1-202ENST00000585847 TRIM49P0CI25 452 aa13.57□□□□□ -0.24
VMP1-202ENST00000585847 TRIM49CP0CI26 452 aa13.57□□□□□ -0.24
VMP1-202ENST00000585847 FERP16591 822 aa13.57□□□□□ -0.24
VMP1-202ENST00000585847 CYP3A5P20815 502 aa13.57□□□□□ -0.24
VMP1-202ENST00000585847 TBXAS1P24557 533 aaPredicted RBP13.57□□□□□ -0.24
VMP1-202ENST00000585847 LRPAP1P30533 357 aa13.57□□□□□ -0.24
VMP1-202ENST00000585847 MFAP3P55082 362 aa13.57□□□□□ -0.24
VMP1-202ENST00000585847 PPP3CAQ08209 521 aa13.57□□□□□ -0.24
VMP1-202ENST00000585847 KCNMA1Q12791 1236 aa13.57□□□□□ -0.24
VMP1-202ENST00000585847 TMEM132DQ14C87 1099 aa13.57□□□□□ -0.24
VMP1-202ENST00000585847 WDR44Q5JSH3 913 aa13.57□□□□□ -0.24
VMP1-202ENST00000585847 SFMBT2Q5VUG0 894 aa13.57□□□□□ -0.24
VMP1-202ENST00000585847 PPP2R2DQ66LE6 453 aa13.57□□□□□ -0.24
VMP1-202ENST00000585847 PDXDC1Q6P996 788 aa13.57□□□□□ -0.24
VMP1-202ENST00000585847 SLC39A11Q8N1S5 342 aa13.57□□□□□ -0.24
VMP1-202ENST00000585847 C1orf127Q8N9H9 656 aa13.57□□□□□ -0.24
VMP1-202ENST00000585847 C3orf58Q8NDZ4 430 aa13.57□□□□□ -0.24
VMP1-202ENST00000585847 BAP1Q92560 729 aa13.57□□□□□ -0.24
VMP1-202ENST00000585847 NT5C1BQ96P26 610 aa13.57□□□□□ -0.24
VMP1-202ENST00000585847 UHRF1Q96T88 793 aaPredicted RBP13.57□□□□□ -0.24
VMP1-202ENST00000585847 TMEM175Q9BSA9 504 aa13.57□□□□□ -0.24
VMP1-202ENST00000585847 VN1R3Q9BXE9 311 aa13.57□□□□□ -0.24
VMP1-202ENST00000585847 SPTLC3Q9NUV7 552 aa13.57□□□□□ -0.24
VMP1-202ENST00000585847 RAB20Q9NX57 234 aa13.57□□□□□ -0.24
VMP1-202ENST00000585847 SIX4Q9UIU6 781 aa13.57□□□□□ -0.24
VMP1-202ENST00000585847 UBQLN1Q9UMX0 589 aaKnown RBP13.57□□□□□ -0.24
VMP1-202ENST00000585847 COL4A4P53420 1690 aaPredicted RBP13.56□□□□□ -0.24
VMP1-202ENST00000585847 C5orf67F2Z3F1 127 aa13.56□□□□□ -0.24
VMP1-202ENST00000585847 SERPING1P05155 500 aa13.56□□□□□ -0.24
VMP1-202ENST00000585847 TNNI1P19237 187 aa13.56□□□□□ -0.24
VMP1-202ENST00000585847 PAX3P23760 479 aa13.56□□□□□ -0.24
VMP1-202ENST00000585847 ATICP31939 592 aa13.56□□□□□ -0.24
VMP1-202ENST00000585847 BMPR1AP36894 532 aa13.56□□□□□ -0.24
VMP1-202ENST00000585847 PRKCIP41743 596 aa13.56□□□□□ -0.24
VMP1-202ENST00000585847 STAT1P42224 750 aa13.56□□□□□ -0.24
VMP1-202ENST00000585847 CLCNKBP51801 687 aa13.56□□□□□ -0.24
VMP1-202ENST00000585847 ADKP55263 362 aaKnown RBP13.56□□□□□ -0.24
VMP1-202ENST00000585847 POLR2FP61218 127 aaKnown RBP13.56□□□□□ -0.24
VMP1-202ENST00000585847 YWHAEP62258 255 aaKnown RBP13.56□□□□□ -0.24
VMP1-202ENST00000585847 RNASELQ05823 741 aaKnown RBP13.56□□□□□ -0.24
VMP1-202ENST00000585847 ADGRE1Q14246 886 aa13.56□□□□□ -0.24
VMP1-202ENST00000585847 UPP1Q16831 310 aa13.56□□□□□ -0.24
VMP1-202ENST00000585847 CBWD6Q4V339 395 aa13.56□□□□□ -0.24
VMP1-202ENST00000585847 CBWD3Q5JTY5 395 aa13.56□□□□□ -0.24
VMP1-202ENST00000585847 CBWD5Q5RIA9 395 aa13.56□□□□□ -0.24
VMP1-202ENST00000585847 C10orf76Q5T2E6 689 aa13.56□□□□□ -0.24
VMP1-202ENST00000585847 PPP1R2P3Q6NXS1 205 aa13.56□□□□□ -0.24
VMP1-202ENST00000585847 KCNT2Q6UVM3 1135 aa13.56□□□□□ -0.24
VMP1-202ENST00000585847 SV2AQ7L0J3 742 aa13.56□□□□□ -0.24
VMP1-202ENST00000585847 TMEM139Q8IV31 216 aa13.56□□□□□ -0.24
VMP1-202ENST00000585847 CCDC127Q96BQ5 260 aa13.56□□□□□ -0.24
VMP1-202ENST00000585847 ANKRD36BP1Q96IX9 119 aa13.56□□□□□ -0.24
VMP1-202ENST00000585847 MTMR12Q9C0I1 747 aa13.56□□□□□ -0.24
VMP1-202ENST00000585847 MYO9BQ13459 2157 aa13.56□□□□□ -0.24
VMP1-202ENST00000585847 MUC3AQ02505 3323 aa13.56□□□□□ -0.24
VMP1-202ENST00000585847 PIRO00625 290 aa13.55□□□□□ -0.24
VMP1-202ENST00000585847 KIF4AO95239 1232 aa13.55□□□□□ -0.24
VMP1-202ENST00000585847 VNN1O95497 513 aa13.55□□□□□ -0.24
VMP1-202ENST00000585847 STAU1O95793 577 aaKnown RBP13.55□□□□□ -0.24
VMP1-202ENST00000585847 CST3P01034 146 aaPredicted RBP13.55□□□□□ -0.24
VMP1-202ENST00000585847 DLATP10515 647 aaKnown RBP13.55□□□□□ -0.24
VMP1-202ENST00000585847 P4HA1P13674 534 aa13.55□□□□□ -0.24
VMP1-202ENST00000585847 LAG3P18627 525 aa13.55□□□□□ -0.24
VMP1-202ENST00000585847 OR1G1P47890 313 aa13.55□□□□□ -0.24
VMP1-202ENST00000585847 GCLMP48507 274 aa13.55□□□□□ -0.24
VMP1-202ENST00000585847 TFAMQ00059 246 aaKnown RBP13.55□□□□□ -0.24
VMP1-202ENST00000585847 SKIV2LQ15477 1246 aaKnown RBP13.55□□□□□ -0.24
VMP1-202ENST00000585847 TDRD10Q5VZ19 366 aaKnown RBP13.55□□□□□ -0.24
VMP1-202ENST00000585847 C9orf57Q5W0N0 161 aa13.55□□□□□ -0.24
VMP1-202ENST00000585847 ZNF662Q6ZS27 426 aa13.55□□□□□ -0.24
VMP1-202ENST00000585847 RRAGAQ7L523 313 aa13.55□□□□□ -0.24
VMP1-202ENST00000585847 TRAPPC11Q7Z392 1133 aa13.55□□□□□ -0.24
VMP1-202ENST00000585847 RNF168Q8IYW5 571 aaPredicted RBP13.55□□□□□ -0.24
VMP1-202ENST00000585847 CPLX3Q8WVH0 158 aa13.55□□□□□ -0.24
VMP1-202ENST00000585847 CCDC42Q96M95 316 aa13.55□□□□□ -0.24
VMP1-202ENST00000585847 TGS1Q96RS0 853 aaKnown RBP13.55□□□□□ -0.24
VMP1-202ENST00000585847 DNAI2Q9GZS0 605 aa13.55□□□□□ -0.24
VMP1-202ENST00000585847 CERS4Q9HA82 394 aa13.55□□□□□ -0.24
VMP1-202ENST00000585847 SLC38A7Q9NVC3 462 aa13.55□□□□□ -0.24
VMP1-202ENST00000585847 DPP3Q9NY33 737 aa13.55□□□□□ -0.24
VMP1-202ENST00000585847 ITGA11Q9UKX5 1188 aa13.55□□□□□ -0.24
VMP1-202ENST00000585847 PRG3Q9Y2Y8 225 aaPredicted RBP13.55□□□□□ -0.24
VMP1-202ENST00000585847 R3HCC1Q9Y3T6 440 aaKnown RBP13.55□□□□□ -0.24
VMP1-202ENST00000585847 LRRC53A6NM62 1247 aa13.54□□□□□ -0.24
VMP1-202ENST00000585847 EIF3CLB5ME19 914 aaKnown RBP13.54□□□□□ -0.24
VMP1-202ENST00000585847 F8VZ95 297 aa13.54□□□□□ -0.24
VMP1-202ENST00000585847 TMEM189-UBE2V1I3L0A0 370 aa13.54□□□□□ -0.24
VMP1-202ENST00000585847 PODXLO00592 558 aa13.54□□□□□ -0.24
VMP1-202ENST00000585847 SPTLC1O15269 473 aa13.54□□□□□ -0.24
VMP1-202ENST00000585847 LRRN2O75325 713 aa13.54□□□□□ -0.24
VMP1-202ENST00000585847 NOL4O94818 638 aa13.54□□□□□ -0.24
VMP1-202ENST00000585847 ALDH2P05091 517 aa13.54□□□□□ -0.24
VMP1-202ENST00000585847 TMEM191BP0C7N4 346 aa13.54□□□□□ -0.24
VMP1-202ENST00000585847 DNAJB1P25685 340 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms