RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 TIPINQ9BVW5 301 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 STRA6Q9BX79 667 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 KRTAP17-1Q9BYP8 105 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 TRIM9Q9C026 710 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 CCDC113Q9H0I3 377 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 TNMDQ9H2S6 317 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 FZD8Q9H461 694 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 CUEDC2Q9H467 287 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 PRKAG2Q9UGJ0 569 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 PADI3Q9ULW8 664 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 ST3GAL5Q9UNP4 418 aa6.21□□□□□ -1.42
CDH8-213ENST00000584966 PLXNA4Q9HCM2 1894 aa6.2□□□□□ -1.42
CDH8-213ENST00000584966 DBX1A6NMT0 343 aa6.2□□□□□ -1.42
CDH8-213ENST00000584966 MMP20O60882 483 aa6.2□□□□□ -1.42
CDH8-213ENST00000584966 RPS6KA5O75582 802 aa6.2□□□□□ -1.42
CDH8-213ENST00000584966 SSBP05455 408 aaKnown RBP eCLIP6.2□□□□□ -1.42
CDH8-213ENST00000584966 PLS3P13797 630 aa6.2□□□□□ -1.42
CDH8-213ENST00000584966 SYKP43405 635 aa6.2□□□□□ -1.42
CDH8-213ENST00000584966 NAMPTP43490 491 aa6.2□□□□□ -1.42
CDH8-213ENST00000584966 NPTX2P47972 431 aa6.2□□□□□ -1.42
CDH8-213ENST00000584966 NCKAP1LP55160 1127 aa6.2□□□□□ -1.42
CDH8-213ENST00000584966 PEX3P56589 373 aa6.2□□□□□ -1.42
CDH8-213ENST00000584966 FAM189BP81408 668 aa6.2□□□□□ -1.42
CDH8-213ENST00000584966 PPIGQ13427 754 aaKnown RBP eCLIP6.2□□□□□ -1.42
CDH8-213ENST00000584966 FAM187BQ17R55 369 aa6.2□□□□□ -1.42
CDH8-213ENST00000584966 NT5DC1Q5TFE4 455 aa6.2□□□□□ -1.42
CDH8-213ENST00000584966 CNKSR3Q6P9H4 555 aa6.2□□□□□ -1.42
CDH8-213ENST00000584966 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.2□□□□□ -1.42
CDH8-213ENST00000584966 DYMQ7RTS9 669 aa6.2□□□□□ -1.42
CDH8-213ENST00000584966 SRGAP1Q7Z6B7 1085 aa6.2□□□□□ -1.42
CDH8-213ENST00000584966 RPUSD2Q8IZ73 545 aaKnown RBP6.2□□□□□ -1.42
CDH8-213ENST00000584966 FBXL6Q8N531 539 aa6.2□□□□□ -1.42
CDH8-213ENST00000584966 USP38Q8NB14 1042 aa6.2□□□□□ -1.42
CDH8-213ENST00000584966 RNF149Q8NC42 400 aa6.2□□□□□ -1.42
CDH8-213ENST00000584966 TMEM161BQ8NDZ6 487 aa6.2□□□□□ -1.42
CDH8-213ENST00000584966 GLIS3Q8NEA6 775 aa6.2□□□□□ -1.42
CDH8-213ENST00000584966 HERVK_113Q902F9 699 aa6.2□□□□□ -1.42
CDH8-213ENST00000584966 KIFAP3Q92845 792 aa6.2□□□□□ -1.42
CDH8-213ENST00000584966 FBXL18Q96ME1 805 aa6.2□□□□□ -1.42
CDH8-213ENST00000584966 NLRP4Q96MN2 994 aa6.2□□□□□ -1.42
CDH8-213ENST00000584966 MAP7D2Q96T17 732 aa6.2□□□□□ -1.42
CDH8-213ENST00000584966 KIFC3Q9BVG8 833 aa6.2□□□□□ -1.42
CDH8-213ENST00000584966 FGFBP2Q9BYJ0 223 aa6.2□□□□□ -1.42
CDH8-213ENST00000584966 IFIH1Q9BYX4 1025 aaKnown RBP6.2□□□□□ -1.42
CDH8-213ENST00000584966 GCOM2Q9BZD3 368 aaPredicted RBP6.2□□□□□ -1.42
CDH8-213ENST00000584966 LACRTQ9GZZ8 138 aa6.2□□□□□ -1.42
CDH8-213ENST00000584966 C17orf75Q9HAS0 396 aa6.2□□□□□ -1.42
CDH8-213ENST00000584966 MAGEF1Q9HAY2 307 aa6.2□□□□□ -1.42
CDH8-213ENST00000584966 ARHGAP28Q9P2N2 729 aa6.2□□□□□ -1.42
CDH8-213ENST00000584966 USP25Q9UHP3 1055 aa6.2□□□□□ -1.42
CDH8-213ENST00000584966 GGT7Q9UJ14 662 aa6.2□□□□□ -1.42
CDH8-213ENST00000584966 ODF2LQ9ULJ1 636 aa6.2□□□□□ -1.42
CDH8-213ENST00000584966 PRUNE2Q8WUY3 3088 aa6.19□□□□□ -1.42
CDH8-213ENST00000584966 COL6A3P12111 3177 aa6.19□□□□□ -1.42
CDH8-213ENST00000584966 ABHD14A-ACY1A0A1B0GW23 586 aa6.19□□□□□ -1.42
CDH8-213ENST00000584966 A0A1W2PP55 124 aa6.19□□□□□ -1.42
CDH8-213ENST00000584966 ABLIM1O14639 778 aa6.19□□□□□ -1.42
CDH8-213ENST00000584966 DDX3YO15523 660 aaKnown RBP6.19□□□□□ -1.42
CDH8-213ENST00000584966 B4GALT5O43286 388 aa6.19□□□□□ -1.42
CDH8-213ENST00000584966 TSPAN1O60635 241 aa6.19□□□□□ -1.42
CDH8-213ENST00000584966 FGBP02675 491 aa6.19□□□□□ -1.42
CDH8-213ENST00000584966 PFKMP08237 780 aa6.19□□□□□ -1.42
CDH8-213ENST00000584966 ARF4P18085 180 aaPredicted RBP6.19□□□□□ -1.42
CDH8-213ENST00000584966 CES1P23141 567 aa6.19□□□□□ -1.42
CDH8-213ENST00000584966 NMT1P30419 496 aaKnown RBP6.19□□□□□ -1.42
CDH8-213ENST00000584966 HOXD13P35453 343 aa6.19□□□□□ -1.42
CDH8-213ENST00000584966 AFMP43652 599 aa6.19□□□□□ -1.42
CDH8-213ENST00000584966 PREPP48147 710 aa6.19□□□□□ -1.42
CDH8-213ENST00000584966 SARSP49591 514 aaKnown RBP6.19□□□□□ -1.42
CDH8-213ENST00000584966 CASP5P51878 434 aa6.19□□□□□ -1.42
CDH8-213ENST00000584966 UBE2HP62256 183 aa6.19□□□□□ -1.42
CDH8-213ENST00000584966 GTF2BQ00403 316 aa6.19□□□□□ -1.42
CDH8-213ENST00000584966 FAM160A1Q05DH4 1040 aa6.19□□□□□ -1.42
CDH8-213ENST00000584966 UBXN11Q5T124 520 aa6.19□□□□□ -1.42
CDH8-213ENST00000584966 TTC39BQ5VTQ0 682 aaPredicted RBP6.19□□□□□ -1.42
CDH8-213ENST00000584966 PEAR1Q5VY43 1037 aaPredicted RBP6.19□□□□□ -1.42
CDH8-213ENST00000584966 EPM2AIP1Q7L775 607 aaPredicted RBP6.19□□□□□ -1.42
CDH8-213ENST00000584966 OTOP2Q7RTS6 562 aa6.19□□□□□ -1.42
CDH8-213ENST00000584966 ZNF720Q7Z2F6 126 aa6.19□□□□□ -1.42
CDH8-213ENST00000584966 ELOA2Q8IYF1 753 aaPredicted RBP6.19□□□□□ -1.42
CDH8-213ENST00000584966 CACTIN-AS1Q8N1I8 211 aa6.19□□□□□ -1.42
CDH8-213ENST00000584966 C3orf58Q8NDZ4 430 aa6.19□□□□□ -1.42
CDH8-213ENST00000584966 OR13H1Q8NG92 308 aa6.19□□□□□ -1.42
CDH8-213ENST00000584966 RASSF8Q8NHQ8 419 aa6.19□□□□□ -1.42
CDH8-213ENST00000584966 SPATA20Q8TB22 786 aa6.19□□□□□ -1.42
CDH8-213ENST00000584966 GPT2Q8TD30 523 aa6.19□□□□□ -1.42
CDH8-213ENST00000584966 UBASH3BQ8TF42 649 aa6.19□□□□□ -1.42
CDH8-213ENST00000584966 APBB2Q92870 758 aa6.19□□□□□ -1.42
CDH8-213ENST00000584966 HPS3Q969F9 1004 aa6.19□□□□□ -1.42
CDH8-213ENST00000584966 CCDC43Q96MW1 224 aaKnown RBP6.19□□□□□ -1.42
CDH8-213ENST00000584966 TIGD1Q96MW7 591 aa6.19□□□□□ -1.42
CDH8-213ENST00000584966 LBHD1Q9BQE6 289 aaPredicted RBP6.19□□□□□ -1.42
CDH8-213ENST00000584966 PYM1Q9BRP8 204 aaKnown RBP6.19□□□□□ -1.42
CDH8-213ENST00000584966 HAPLN2Q9GZV7 340 aa6.19□□□□□ -1.42
CDH8-213ENST00000584966 BLZF1Q9H2G9 400 aa6.19□□□□□ -1.42
CDH8-213ENST00000584966 ST6GALNAC4Q9H4F1 302 aa6.19□□□□□ -1.42
CDH8-213ENST00000584966 PARVGQ9HBI0 331 aa6.19□□□□□ -1.42
CDH8-213ENST00000584966 PTPRHQ9HD43 1115 aa6.19□□□□□ -1.42
CDH8-213ENST00000584966 RGS18Q9NS28 235 aa6.19□□□□□ -1.42
CDH8-213ENST00000584966 AGPAT5Q9NUQ2 364 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms