RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 MYL7Q01449 175 aa14.9□□□□□ -0.02
TRAF4-215ENST00000584944 CTC1Q2NKJ3 1217 aa14.9□□□□□ -0.02
TRAF4-215ENST00000584944 SGSM1Q2NKQ1 1148 aa14.9□□□□□ -0.02
TRAF4-215ENST00000584944 ANKS3Q6ZW76 656 aa14.9□□□□□ -0.02
TRAF4-215ENST00000584944 SV2AQ7L0J3 742 aa14.9□□□□□ -0.02
TRAF4-215ENST00000584944 THEM5Q8N1Q8 247 aa14.9□□□□□ -0.02
TRAF4-215ENST00000584944 AOPEPQ8N6M6 819 aa14.9□□□□□ -0.02
TRAF4-215ENST00000584944 C3orf58Q8NDZ4 430 aa14.9□□□□□ -0.02
TRAF4-215ENST00000584944 SUSD3Q96L08 255 aa14.9□□□□□ -0.02
TRAF4-215ENST00000584944 B3GALT6Q96L58 329 aa14.9□□□□□ -0.02
TRAF4-215ENST00000584944 GPR62Q9BZJ7 368 aa14.9□□□□□ -0.02
TRAF4-215ENST00000584944 NXF1Q9UBU9 619 aaKnown RBP14.9□□□□□ -0.02
TRAF4-215ENST00000584944 PCDHB8Q9UN66 801 aa14.9□□□□□ -0.02
TRAF4-215ENST00000584944 SNX9Q9Y5X1 595 aa14.9□□□□□ -0.02
TRAF4-215ENST00000584944 KCNJ18B7U540 433 aa14.89□□□□□ -0.03
TRAF4-215ENST00000584944 NCK2O43639 380 aa14.89□□□□□ -0.03
TRAF4-215ENST00000584944 AFPP02771 609 aaKnown RBP14.89□□□□□ -0.03
TRAF4-215ENST00000584944 ADH1AP07327 375 aa14.89□□□□□ -0.03
TRAF4-215ENST00000584944 CTSAP10619 480 aa14.89□□□□□ -0.03
TRAF4-215ENST00000584944 EEF1GP26641 437 aaKnown RBP14.89□□□□□ -0.03
TRAF4-215ENST00000584944 TKTP29401 623 aaKnown RBP14.89□□□□□ -0.03
TRAF4-215ENST00000584944 SSTR3P32745 418 aaPredicted RBP14.89□□□□□ -0.03
TRAF4-215ENST00000584944 ERVFC1P60507 584 aa14.89□□□□□ -0.03
TRAF4-215ENST00000584944 MYL6P60660 151 aa14.89□□□□□ -0.03
TRAF4-215ENST00000584944 CLDN10P78369 228 aa14.89□□□□□ -0.03
TRAF4-215ENST00000584944 YWHAHQ04917 246 aaPredicted RBP14.89□□□□□ -0.03
TRAF4-215ENST00000584944 KCNJ12Q14500 433 aa14.89□□□□□ -0.03
TRAF4-215ENST00000584944 PSMD5Q16401 504 aa14.89□□□□□ -0.03
TRAF4-215ENST00000584944 WDR72Q3MJ13 1102 aa14.89□□□□□ -0.03
TRAF4-215ENST00000584944 ZNF667Q5HYK9 610 aa14.89□□□□□ -0.03
TRAF4-215ENST00000584944 TDRD10Q5VZ19 366 aaKnown RBP14.89□□□□□ -0.03
TRAF4-215ENST00000584944 ZNF280DQ6N043 979 aa14.89□□□□□ -0.03
TRAF4-215ENST00000584944 RBM23Q86U06 439 aaKnown RBP14.89□□□□□ -0.03
TRAF4-215ENST00000584944 MRPL43Q8N983 215 aaKnown RBP14.89□□□□□ -0.03
TRAF4-215ENST00000584944 FBXL13Q8NEE6 735 aa14.89□□□□□ -0.03
TRAF4-215ENST00000584944 AUTS2Q8WXX7 1259 aa14.89□□□□□ -0.03
TRAF4-215ENST00000584944 TAF4BQ92750 862 aa14.89□□□□□ -0.03
TRAF4-215ENST00000584944 FAM84AQ96KN4 292 aa14.89□□□□□ -0.03
TRAF4-215ENST00000584944 SENP8Q96LD8 212 aa14.89□□□□□ -0.03
TRAF4-215ENST00000584944 ZBP1Q9H171 429 aa14.89□□□□□ -0.03
TRAF4-215ENST00000584944 TSPY26PQ9H489 355 aa14.89□□□□□ -0.03
TRAF4-215ENST00000584944 IGFLR1Q9H665 355 aa14.89□□□□□ -0.03
TRAF4-215ENST00000584944 CLDND1Q9NY35 253 aa14.89□□□□□ -0.03
TRAF4-215ENST00000584944 HCN4Q9Y3Q4 1203 aa14.89□□□□□ -0.03
TRAF4-215ENST00000584944 PPEF2O14830 753 aa14.88□□□□□ -0.03
TRAF4-215ENST00000584944 HLA-DRAP01903 254 aa14.88□□□□□ -0.03
TRAF4-215ENST00000584944 DNAJB1P25685 340 aa14.88□□□□□ -0.03
TRAF4-215ENST00000584944 NRIP1P48552 1158 aa14.88□□□□□ -0.03
TRAF4-215ENST00000584944 ARPP19P56211 112 aa14.88□□□□□ -0.03
TRAF4-215ENST00000584944 DSG1Q02413 1049 aa14.88□□□□□ -0.03
TRAF4-215ENST00000584944 PPP3CAQ08209 521 aa14.88□□□□□ -0.03
TRAF4-215ENST00000584944 HYAL1Q12794 435 aa14.88□□□□□ -0.03
TRAF4-215ENST00000584944 ZACNQ401N2 412 aa14.88□□□□□ -0.03
TRAF4-215ENST00000584944 CTXN3Q4LDR2 81 aa14.88□□□□□ -0.03
TRAF4-215ENST00000584944 OVOS1Q6IE37 1185 aa14.88□□□□□ -0.03
TRAF4-215ENST00000584944 PPFIBP1Q86W92 1011 aa14.88□□□□□ -0.03
TRAF4-215ENST00000584944 PLEKHO2Q8TD55 490 aa14.88□□□□□ -0.03
TRAF4-215ENST00000584944 ZNF516Q92618 1163 aa14.88□□□□□ -0.03
TRAF4-215ENST00000584944 OXCT2Q9BYC2 517 aaPredicted RBP14.88□□□□□ -0.03
TRAF4-215ENST00000584944 SNX25Q9H3E2 840 aa14.88□□□□□ -0.03
TRAF4-215ENST00000584944 PRKAG3Q9UGI9 489 aa14.88□□□□□ -0.03
TRAF4-215ENST00000584944 DPP7Q9UHL4 492 aa14.88□□□□□ -0.03
TRAF4-215ENST00000584944 SIX4Q9UIU6 781 aa14.88□□□□□ -0.03
TRAF4-215ENST00000584944 FAM50BQ9Y247 325 aa14.88□□□□□ -0.03
TRAF4-215ENST00000584944 KIAA1671Q9BY89 1806 aa14.87□□□□□ -0.03
TRAF4-215ENST00000584944 C5orf42Q9H799 3197 aa14.87□□□□□ -0.03
TRAF4-215ENST00000584944 C2orf71A6NGG8 1288 aa14.87□□□□□ -0.03
TRAF4-215ENST00000584944 C19orf67A6NJJ6 358 aa14.87□□□□□ -0.03
TRAF4-215ENST00000584944 C4BPAP04003 597 aaKnown RBP14.87□□□□□ -0.03
TRAF4-215ENST00000584944 CPB1P15086 417 aa14.87□□□□□ -0.03
TRAF4-215ENST00000584944 FGFR3P22607 806 aa14.87□□□□□ -0.03
TRAF4-215ENST00000584944 FMO5P49326 533 aa14.87□□□□□ -0.03
TRAF4-215ENST00000584944 NDUFV1P49821 464 aa14.87□□□□□ -0.03
TRAF4-215ENST00000584944 MARSP56192 900 aaKnown RBP14.87□□□□□ -0.03
TRAF4-215ENST00000584944 ZP2Q05996 745 aa14.87□□□□□ -0.03
TRAF4-215ENST00000584944 KCNH2Q12809 1159 aa14.87□□□□□ -0.03
TRAF4-215ENST00000584944 CAMK1Q14012 370 aa14.87□□□□□ -0.03
TRAF4-215ENST00000584944 PTPN14Q15678 1187 aa14.87□□□□□ -0.03
TRAF4-215ENST00000584944 MAN2A1Q16706 1144 aa14.87□□□□□ -0.03
TRAF4-215ENST00000584944 VARS2Q5ST30 1063 aaKnown RBP14.87□□□□□ -0.03
TRAF4-215ENST00000584944 FKBP15Q5T1M5 1219 aa14.87□□□□□ -0.03
TRAF4-215ENST00000584944 PRSS55Q6UWB4 352 aaPredicted RBP14.87□□□□□ -0.03
TRAF4-215ENST00000584944 TAS1R1Q7RTX1 841 aa14.87□□□□□ -0.03
TRAF4-215ENST00000584944 GLYCTKQ8IVS8 523 aa14.87□□□□□ -0.03
TRAF4-215ENST00000584944 TRIM59Q8IWR1 403 aa14.87□□□□□ -0.03
TRAF4-215ENST00000584944 TMEM86AQ8N2M4 240 aa14.87□□□□□ -0.03
TRAF4-215ENST00000584944 PIK3R5Q8WYR1 880 aa14.87□□□□□ -0.03
TRAF4-215ENST00000584944 SLC35C1Q96A29 364 aa14.87□□□□□ -0.03
TRAF4-215ENST00000584944 BORCS6Q96GS4 357 aa14.87□□□□□ -0.03
TRAF4-215ENST00000584944 CDCA3Q99618 268 aaPredicted RBP14.87□□□□□ -0.03
TRAF4-215ENST00000584944 BPIFA3Q9BQP9 254 aa14.87□□□□□ -0.03
TRAF4-215ENST00000584944 TUBGCP2Q9BSJ2 902 aa14.87□□□□□ -0.03
TRAF4-215ENST00000584944 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.87□□□□□ -0.03
TRAF4-215ENST00000584944 FANCLQ9NW38 375 aa14.87□□□□□ -0.03
TRAF4-215ENST00000584944 TIMM13Q9Y5L4 95 aaPredicted RBP14.87□□□□□ -0.03
TRAF4-215ENST00000584944 MUC6Q6W4X9 2439 aa14.86□□□□□ -0.03
TRAF4-215ENST00000584944 TRIP11Q15643 1979 aa14.86□□□□□ -0.03
TRAF4-215ENST00000584944 PRR33A8MZF0 331 aa14.86□□□□□ -0.03
TRAF4-215ENST00000584944 M0QZQ0 153 aa14.86□□□□□ -0.03
TRAF4-215ENST00000584944 CST3P01034 146 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms