RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 PCDHB8Q9UN66 801 aa19.62■□□□□ 0.73
RFFL-211ENST00000584541 PLXNA4Q9HCM2 1894 aa19.61■□□□□ 0.73
RFFL-211ENST00000584541 TSC2P49815 1807 aa19.61■□□□□ 0.73
RFFL-211ENST00000584541 M0QZQ0 153 aa19.61■□□□□ 0.73
RFFL-211ENST00000584541 FAM163BP0C2L3 166 aa19.61■□□□□ 0.73
RFFL-211ENST00000584541 CDC25BP30305 580 aa19.61■□□□□ 0.73
RFFL-211ENST00000584541 PBX2P40425 430 aa19.61■□□□□ 0.73
RFFL-211ENST00000584541 ASPAP45381 313 aa19.61■□□□□ 0.73
RFFL-211ENST00000584541 POLR2FP61218 127 aaKnown RBP19.61■□□□□ 0.73
RFFL-211ENST00000584541 SMAD3P84022 425 aaKnown RBP19.61■□□□□ 0.73
RFFL-211ENST00000584541 APBA1Q02410 837 aa19.61■□□□□ 0.73
RFFL-211ENST00000584541 FIGNQ5HY92 759 aa19.61■□□□□ 0.73
RFFL-211ENST00000584541 TMC6Q7Z403 805 aa19.61■□□□□ 0.73
RFFL-211ENST00000584541 PPFIBP1Q86W92 1011 aa19.61■□□□□ 0.73
RFFL-211ENST00000584541 TMEM86AQ8N2M4 240 aa19.61■□□□□ 0.73
RFFL-211ENST00000584541 TTC39CQ8N584 583 aa19.61■□□□□ 0.73
RFFL-211ENST00000584541 JAKMIP2Q96AA8 810 aa19.61■□□□□ 0.73
RFFL-211ENST00000584541 TGS1Q96RS0 853 aaKnown RBP19.61■□□□□ 0.73
RFFL-211ENST00000584541 BCO2Q9BYV7 579 aa19.61■□□□□ 0.73
RFFL-211ENST00000584541 DNAI2Q9GZS0 605 aa19.61■□□□□ 0.73
RFFL-211ENST00000584541 GANQ9H2C0 597 aa19.61■□□□□ 0.73
RFFL-211ENST00000584541 NKX2-4Q9H2Z4 354 aa19.61■□□□□ 0.73
RFFL-211ENST00000584541 FAM124BQ9H5Z6 455 aaPredicted RBP19.61■□□□□ 0.73
RFFL-211ENST00000584541 CEP72Q9P209 647 aa19.61■□□□□ 0.73
RFFL-211ENST00000584541 YBX2Q9Y2T7 364 aaKnown RBP19.61■□□□□ 0.73
RFFL-211ENST00000584541 I3L4J1 428 aa19.6■□□□□ 0.73
RFFL-211ENST00000584541 SYN3O14994 580 aa19.6■□□□□ 0.73
RFFL-211ENST00000584541 FGF18O76093 207 aa19.6■□□□□ 0.73
RFFL-211ENST00000584541 RB1P06400 928 aa19.6■□□□□ 0.73
RFFL-211ENST00000584541 LINC00271P0C7V0 271 aa19.6■□□□□ 0.73
RFFL-211ENST00000584541 IGFBP6P24592 240 aaPredicted RBP19.6■□□□□ 0.73
RFFL-211ENST00000584541 RAPGEF1Q13905 1077 aa19.6■□□□□ 0.73
RFFL-211ENST00000584541 FAM171A1Q5VUB5 890 aa19.6■□□□□ 0.73
RFFL-211ENST00000584541 PPP2R2DQ66LE6 453 aa19.6■□□□□ 0.73
RFFL-211ENST00000584541 IQCEQ6IPM2 695 aa19.6■□□□□ 0.73
RFFL-211ENST00000584541 GJB7Q6PEY0 223 aa19.6■□□□□ 0.73
RFFL-211ENST00000584541 TMEM173Q86WV6 379 aaPredicted RBP19.6■□□□□ 0.73
RFFL-211ENST00000584541 ADGRF2Q8IZF7 708 aa19.6■□□□□ 0.73
RFFL-211ENST00000584541 SPATA18Q8TC71 538 aa19.6■□□□□ 0.73
RFFL-211ENST00000584541 SPAG5Q96R06 1193 aa19.6■□□□□ 0.73
RFFL-211ENST00000584541 EDEM3Q9BZQ6 932 aa19.6■□□□□ 0.73
RFFL-211ENST00000584541 SMYD3Q9H7B4 428 aa19.6■□□□□ 0.73
RFFL-211ENST00000584541 SLC28A3Q9HAS3 691 aa19.6■□□□□ 0.73
RFFL-211ENST00000584541 NLRC4Q9NPP4 1024 aa19.6■□□□□ 0.73
RFFL-211ENST00000584541 PUF60Q9UHX1 559 aaKnown RBP19.6■□□□□ 0.73
RFFL-211ENST00000584541 FHOD1Q9Y613 1164 aa19.6■□□□□ 0.73
RFFL-211ENST00000584541 VWA8A3KMH1 1905 aa19.6■□□□□ 0.73
RFFL-211ENST00000584541 GOLGA6L6A8MZA4 724 aa19.59■□□□□ 0.73
RFFL-211ENST00000584541 TACC1O75410 805 aa19.59■□□□□ 0.73
RFFL-211ENST00000584541 NOL4O94818 638 aa19.59■□□□□ 0.73
RFFL-211ENST00000584541 WEE2P0C1S8 567 aa19.59■□□□□ 0.73
RFFL-211ENST00000584541 TYMPP19971 482 aa19.59■□□□□ 0.73
RFFL-211ENST00000584541 PLCB3Q01970 1234 aa19.59■□□□□ 0.73
RFFL-211ENST00000584541 TAP1Q03518 808 aa19.59■□□□□ 0.73
RFFL-211ENST00000584541 ARHGAP44Q17R89 818 aa19.59■□□□□ 0.73
RFFL-211ENST00000584541 SOWAHAQ2M3V2 549 aa19.59■□□□□ 0.73
RFFL-211ENST00000584541 DPY19L2P1Q6NXN4 242 aa19.59■□□□□ 0.73
RFFL-211ENST00000584541 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.59■□□□□ 0.73
RFFL-211ENST00000584541 DDX53Q86TM3 631 aaKnown RBP19.59■□□□□ 0.73
RFFL-211ENST00000584541 CEP57Q86XR8 500 aa19.59■□□□□ 0.73
RFFL-211ENST00000584541 KLHL23Q8NBE8 558 aa19.59■□□□□ 0.73
RFFL-211ENST00000584541 ZNF397Q8NF99 534 aaPredicted RBP19.59■□□□□ 0.73
RFFL-211ENST00000584541 BCL7CQ8WUZ0 217 aaPredicted RBP19.59■□□□□ 0.73
RFFL-211ENST00000584541 C17orf80Q9BSJ5 609 aa19.59■□□□□ 0.73
RFFL-211ENST00000584541 C11orf84Q9BUA3 381 aaPredicted RBP19.59■□□□□ 0.73
RFFL-211ENST00000584541 STK33Q9BYT3 514 aa19.59■□□□□ 0.73
RFFL-211ENST00000584541 GPR62Q9BZJ7 368 aa19.59■□□□□ 0.73
RFFL-211ENST00000584541 SNX25Q9H3E2 840 aa19.59■□□□□ 0.73
RFFL-211ENST00000584541 L1RE1Q9UN81 338 aa19.59■□□□□ 0.73
RFFL-211ENST00000584541 A0A1W2PQJ5 194 aa19.58■□□□□ 0.72
RFFL-211ENST00000584541 C5orf67F2Z3F1 127 aa19.58■□□□□ 0.72
RFFL-211ENST00000584541 EPHB6O15197 1021 aa19.58■□□□□ 0.72
RFFL-211ENST00000584541 SOD2P04179 222 aa19.58■□□□□ 0.72
RFFL-211ENST00000584541 CYP11A1P05108 521 aa19.58■□□□□ 0.72
RFFL-211ENST00000584541 CD58P19256 250 aa19.58■□□□□ 0.72
RFFL-211ENST00000584541 DNAJB2P25686 324 aa19.58■□□□□ 0.72
RFFL-211ENST00000584541 RAP1GAPP47736 663 aa19.58■□□□□ 0.72
RFFL-211ENST00000584541 LHX1P48742 406 aa19.58■□□□□ 0.72
RFFL-211ENST00000584541 CDH8P55286 799 aa19.58■□□□□ 0.72
RFFL-211ENST00000584541 ERVK-21P61565 698 aa19.58■□□□□ 0.72
RFFL-211ENST00000584541 YWHAHQ04917 246 aaPredicted RBP19.58■□□□□ 0.72
RFFL-211ENST00000584541 BMS1Q14692 1282 aaKnown RBP19.58■□□□□ 0.72
RFFL-211ENST00000584541 USP41Q3LFD5 358 aa19.58■□□□□ 0.72
RFFL-211ENST00000584541 WSCD1Q658N2 575 aa19.58■□□□□ 0.72
RFFL-211ENST00000584541 SMYD5Q6GMV2 418 aa19.58■□□□□ 0.72
RFFL-211ENST00000584541 KIAA1841Q6NSI8 718 aa19.58■□□□□ 0.72
RFFL-211ENST00000584541 FMNL3Q8IVF7 1028 aa19.58■□□□□ 0.72
RFFL-211ENST00000584541 THEM5Q8N1Q8 247 aa19.58■□□□□ 0.72
RFFL-211ENST00000584541 PDCL2Q8N4E4 241 aa19.58■□□□□ 0.72
RFFL-211ENST00000584541 OR6B3Q8NGW1 331 aa19.58■□□□□ 0.72
RFFL-211ENST00000584541 KREMEN1Q96MU8 473 aa19.58■□□□□ 0.72
RFFL-211ENST00000584541 ARID3AQ99856 593 aa19.58■□□□□ 0.72
RFFL-211ENST00000584541 HERC2P3Q9BVR0 1158 aa19.58■□□□□ 0.72
RFFL-211ENST00000584541 NAA15Q9BXJ9 866 aaKnown RBP19.58■□□□□ 0.72
RFFL-211ENST00000584541 CISHQ9NSE2 258 aa19.58■□□□□ 0.72
RFFL-211ENST00000584541 MTUS1Q9ULD2 1270 aa19.58■□□□□ 0.72
RFFL-211ENST00000584541 COLQQ9Y215 455 aaPredicted RBP19.58■□□□□ 0.72
RFFL-211ENST00000584541 PCDHB4Q9Y5E5 795 aa19.58■□□□□ 0.72
RFFL-211ENST00000584541 FGFR3P22607 806 aa19.57■□□□□ 0.72
RFFL-211ENST00000584541 WARSP23381 471 aaKnown RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms