RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 AGPAT3Q9NRZ7 376 aa22.05■■□□□ 1.12
SS18-224ENST00000584083 DSEQ9UL01 958 aa22.05■■□□□ 1.12
SS18-224ENST00000584083 MAFFQ9ULX9 164 aa22.05■■□□□ 1.12
SS18-224ENST00000584083 AGAP1Q9UPQ3 857 aa22.05■■□□□ 1.12
SS18-224ENST00000584083 INSL5Q9Y5Q6 135 aa22.05■■□□□ 1.12
SS18-224ENST00000584083 TSC2P49815 1807 aa22.04■■□□□ 1.12
SS18-224ENST00000584083 KPNA7A9QM74 516 aa22.04■■□□□ 1.12
SS18-224ENST00000584083 CLIC2O15247 247 aa22.04■■□□□ 1.12
SS18-224ENST00000584083 KLRC4O43908 158 aa22.04■■□□□ 1.12
SS18-224ENST00000584083 TMEM191BP0C7N4 346 aa22.04■■□□□ 1.12
SS18-224ENST00000584083 PTPN2P17706 415 aa22.04■■□□□ 1.12
SS18-224ENST00000584083 POLR2BP30876 1174 aaKnown RBP22.04■■□□□ 1.12
SS18-224ENST00000584083 PNPLA4P41247 253 aa22.04■■□□□ 1.12
SS18-224ENST00000584083 CYP2J2P51589 502 aa22.04■■□□□ 1.12
SS18-224ENST00000584083 SNRPFP62306 86 aaKnown RBP22.04■■□□□ 1.12
SS18-224ENST00000584083 SURF1Q15526 300 aa22.04■■□□□ 1.12
SS18-224ENST00000584083 CSGALNACT2Q8N6G5 542 aa22.04■■□□□ 1.12
SS18-224ENST00000584083 RDH13Q8NBN7 331 aa22.04■■□□□ 1.12
SS18-224ENST00000584083 RSAD2Q8WXG1 361 aa22.04■■□□□ 1.12
SS18-224ENST00000584083 ASIC4Q96FT7 647 aa22.04■■□□□ 1.12
SS18-224ENST00000584083 PGLYRP2Q96PD5 576 aa22.04■■□□□ 1.12
SS18-224ENST00000584083 CDH7Q9ULB5 785 aa22.04■■□□□ 1.12
SS18-224ENST00000584083 ZFP37Q9Y6Q3 630 aaPredicted RBP22.04■■□□□ 1.12
SS18-224ENST00000584083 FAM237AA0A1B0GTK4 181 aa22.03■■□□□ 1.12
SS18-224ENST00000584083 A0A1W2PQ27 194 aa22.03■■□□□ 1.12
SS18-224ENST00000584083 A0A1W2PQ64 194 aa22.03■■□□□ 1.12
SS18-224ENST00000584083 A0A1W2PQD8 194 aa22.03■■□□□ 1.12
SS18-224ENST00000584083 CYP11A1P05108 521 aa22.03■■□□□ 1.12
SS18-224ENST00000584083 KRT19P08727 400 aa22.03■■□□□ 1.12
SS18-224ENST00000584083 PSMD2Q13200 908 aa22.03■■□□□ 1.12
SS18-224ENST00000584083 MYBPC2Q14324 1141 aa22.03■■□□□ 1.12
SS18-224ENST00000584083 KNOP1Q1ED39 458 aaKnown RBP22.03■■□□□ 1.12
SS18-224ENST00000584083 BMT2Q1RMZ1 405 aa22.03■■□□□ 1.12
SS18-224ENST00000584083 KMT5BQ4FZB7 885 aa22.03■■□□□ 1.12
SS18-224ENST00000584083 SUGP1Q8IWZ8 645 aaKnown RBP22.03■■□□□ 1.12
SS18-224ENST00000584083 THEM5Q8N1Q8 247 aa22.03■■□□□ 1.12
SS18-224ENST00000584083 ELMOD1Q8N336 334 aa22.03■■□□□ 1.12
SS18-224ENST00000584083 C1orf127Q8N9H9 656 aa22.03■■□□□ 1.12
SS18-224ENST00000584083 ITFG1Q8TB96 612 aa22.03■■□□□ 1.12
SS18-224ENST00000584083 FAM84AQ96KN4 292 aa22.03■■□□□ 1.12
SS18-224ENST00000584083 CORO1BQ9BR76 489 aa22.03■■□□□ 1.12
SS18-224ENST00000584083 MTMR12Q9C0I1 747 aa22.03■■□□□ 1.12
SS18-224ENST00000584083 ITGA11Q9UKX5 1188 aa22.03■■□□□ 1.12
SS18-224ENST00000584083 MRPS23Q9Y3D9 190 aaKnown RBP22.03■■□□□ 1.12
SS18-224ENST00000584083 R3HCC1Q9Y3T6 440 aaKnown RBP22.03■■□□□ 1.12
SS18-224ENST00000584083 MYL1P05976 194 aa22.02■■□□□ 1.12
SS18-224ENST00000584083 RHOP08100 348 aa22.02■■□□□ 1.12
SS18-224ENST00000584083 TWF1Q12792 350 aa22.02■■□□□ 1.12
SS18-224ENST00000584083 BFSP1Q12934 665 aa22.02■■□□□ 1.12
SS18-224ENST00000584083 GPR17Q13304 367 aa22.02■■□□□ 1.12
SS18-224ENST00000584083 WSCD1Q658N2 575 aa22.02■■□□□ 1.12
SS18-224ENST00000584083 LMBRD2Q68DH5 695 aaPredicted RBP22.02■■□□□ 1.12
SS18-224ENST00000584083 XXYLT1Q8NBI6 393 aa22.02■■□□□ 1.12
SS18-224ENST00000584083 FGF13Q92913 245 aa22.02■■□□□ 1.12
SS18-224ENST00000584083 NXPE3Q969Y0 559 aa22.02■■□□□ 1.12
SS18-224ENST00000584083 CCDC47Q96A33 483 aaKnown RBP22.02■■□□□ 1.12
SS18-224ENST00000584083 BORCS6Q96GS4 357 aa22.02■■□□□ 1.12
SS18-224ENST00000584083 ANKRD36BP1Q96IX9 119 aa22.02■■□□□ 1.12
SS18-224ENST00000584083 INTS13Q9NVM9 706 aa22.02■■□□□ 1.12
SS18-224ENST00000584083 CGNQ9P2M7 1197 aaKnown RBP22.02■■□□□ 1.12
SS18-224ENST00000584083 TNNC2P02585 160 aa22.01■■□□□ 1.11
SS18-224ENST00000584083 RBP5P82980 135 aa22.01■■□□□ 1.11
SS18-224ENST00000584083 STK4Q13043 487 aa22.01■■□□□ 1.11
SS18-224ENST00000584083 DUSP4Q13115 394 aa22.01■■□□□ 1.11
SS18-224ENST00000584083 SNRNP35Q16560 246 aaKnown RBP22.01■■□□□ 1.11
SS18-224ENST00000584083 DUOXA2Q1HG44 320 aa22.01■■□□□ 1.11
SS18-224ENST00000584083 IQCEQ6IPM2 695 aa22.01■■□□□ 1.11
SS18-224ENST00000584083 FBXL6Q8N531 539 aa22.01■■□□□ 1.11
SS18-224ENST00000584083 ST13P5Q8NFI4 369 aaPredicted RBP22.01■■□□□ 1.11
SS18-224ENST00000584083 ING5Q8WYH8 240 aa22.01■■□□□ 1.11
SS18-224ENST00000584083 ZNF512Q96ME7 567 aaPredicted RBP22.01■■□□□ 1.11
SS18-224ENST00000584083 TMEM209Q96SK2 561 aa22.01■■□□□ 1.11
SS18-224ENST00000584083 GOLPH3LQ9H4A5 285 aa22.01■■□□□ 1.11
SS18-224ENST00000584083 RPN1P04843 607 aaKnown RBP22■■□□□ 1.11
SS18-224ENST00000584083 SLC44A3Q8N4M1 653 aa22■■□□□ 1.11
SS18-224ENST00000584083 LRRC52Q8N7C0 313 aa22■■□□□ 1.11
SS18-224ENST00000584083 KIAA0895Q8NCT3 520 aa22■■□□□ 1.11
SS18-224ENST00000584083 OR5B17Q8NGF7 314 aa22■■□□□ 1.11
SS18-224ENST00000584083 OR10T2Q8NGX3 314 aa22■■□□□ 1.11
SS18-224ENST00000584083 GOLGA5Q8TBA6 731 aa22■■□□□ 1.11
SS18-224ENST00000584083 FNBP1Q96RU3 617 aa22■■□□□ 1.11
SS18-224ENST00000584083 DUSP12Q9UNI6 340 aa22■■□□□ 1.11
SS18-224ENST00000584083 SLC27A5Q9Y2P5 690 aa22■■□□□ 1.11
SS18-224ENST00000584083 YIPF1Q9Y548 306 aa22■■□□□ 1.11
SS18-224ENST00000584083 PTPRJQ12913 1337 aa22■■□□□ 1.11
SS18-224ENST00000584083 GOLGA6L4A6NEF3 574 aa21.99■■□□□ 1.11
SS18-224ENST00000584083 ANHXE9PGG2 379 aa21.99■■□□□ 1.11
SS18-224ENST00000584083 HUS1O60921 280 aa21.99■■□□□ 1.11
SS18-224ENST00000584083 ZNF202O95125 648 aa21.99■■□□□ 1.11
SS18-224ENST00000584083 VNN2O95498 520 aa21.99■■□□□ 1.11
SS18-224ENST00000584083 PRR29P0C7W0 189 aa21.99■■□□□ 1.11
SS18-224ENST00000584083 DLATP10515 647 aaKnown RBP21.99■■□□□ 1.11
SS18-224ENST00000584083 HTR4Q13639 388 aa21.99■■□□□ 1.11
SS18-224ENST00000584083 SLC39A12Q504Y0 691 aa21.99■■□□□ 1.11
SS18-224ENST00000584083 CYP4A22Q5TCH4 519 aa21.99■■□□□ 1.11
SS18-224ENST00000584083 SCARA3Q6AZY7 606 aa21.99■■□□□ 1.11
SS18-224ENST00000584083 CENPPQ6IPU0 288 aa21.99■■□□□ 1.11
SS18-224ENST00000584083 KRBA2Q6ZNG9 492 aa21.99■■□□□ 1.11
SS18-224ENST00000584083 WDR49Q8IV35 697 aa21.99■■□□□ 1.11
SS18-224ENST00000584083 NPAS3Q8IXF0 933 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms