RNA–Protein interactions for RNA: ENST00000583930.5

CCDC178-213, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 3,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-213ENST00000583930 ZNF18P17022 549 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 HOXD13P35453 343 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 ZNF252P-AS1Q0IIN9 211 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 ITGA7Q13683 1181 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 KCNC3Q14003 757 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 HSDL1Q3SXM5 330 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 JAKMIP3Q5VZ66 844 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 SLFN12LQ6IEE8 588 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 ZNF720Q7Z2F6 126 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 ADSSL1Q8N142 457 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 MLKLQ8NB16 471 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 CMASQ8NFW8 434 aaPredicted RBP3.31□□□□□ -1.88
CCDC178-213ENST00000583930 CALML4Q96GE6 196 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 PAGE5Q96GU1 130 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 CCDC34Q96HJ3 373 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 TCEANC2Q96MN5 208 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 SPATA33Q96N06 139 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 HERC2P3Q9BVR0 1158 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 ASB7Q9H672 318 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 RETREG1Q9H6L5 497 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 RWDD2AQ9UIY3 292 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 HOOK1Q9UJC3 728 aaKnown RBP3.31□□□□□ -1.88
CCDC178-213ENST00000583930 TRIM17Q9Y577 477 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 PCDHA11Q9Y5I1 949 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 COL4A3BPQ9Y5P4 624 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 A0A0B4J269 797 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 MYADML2A6NDP7 307 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 CHURC1-FNTBB4DL54 471 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 H3BQV1 296 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 M0R082 166 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 HTR3BO95264 441 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 LDHAP00338 332 aaKnown RBP3.31□□□□□ -1.88
CCDC178-213ENST00000583930 TP53P04637 393 aaPredicted RBP3.31□□□□□ -1.88
CCDC178-213ENST00000583930 PGK2P07205 417 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 GSTP1P09211 210 aaKnown RBP3.31□□□□□ -1.88
CCDC178-213ENST00000583930 PLA2G4BP0C869 781 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 SFPQP23246 707 aaKnown RBP eCLIP3.31□□□□□ -1.88
CCDC178-213ENST00000583930 GLRA2P23416 452 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 PBX1P40424 430 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 AFF1P51825 1210 aaKnown RBP3.31□□□□□ -1.88
CCDC178-213ENST00000583930 MLLT6P55198 1093 aaPredicted RBP3.31□□□□□ -1.88
CCDC178-213ENST00000583930 SMARCB1Q12824 385 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 NKG7Q16617 165 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 UVSSAQ2YD98 709 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 USH1GQ495M9 461 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 LONRF3Q496Y0 759 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 MTERF2Q49AM1 385 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 STXBP4Q6ZWJ1 553 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 ARCQ7LC44 396 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 FRMD5Q7Z6J6 570 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 RSPH3Q86UC2 560 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 FMNL3Q8IVF7 1028 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 ZNF417Q8TAU3 575 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 C2orf15Q8WU43 125 aaKnown RBP3.31□□□□□ -1.88
CCDC178-213ENST00000583930 ZNF587Q96SQ5 575 aaPredicted RBP3.31□□□□□ -1.88
CCDC178-213ENST00000583930 CELF4Q9BZC1 486 aaKnown RBP3.31□□□□□ -1.88
CCDC178-213ENST00000583930 WNT8AQ9H1J5 351 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 GOLPH3LQ9H4A5 285 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 PDGFCQ9NRA1 345 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 TOMM22Q9NS69 142 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 GDAP2Q9NXN4 497 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 ACTR10Q9NZ32 417 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 FNIP2Q9P278 1114 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 REV1Q9UBZ9 1251 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 KCNH3Q9ULD8 1083 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 DNM3Q9UQ16 869 aa3.31□□□□□ -1.88
CCDC178-213ENST00000583930 TNRC6BQ9UPQ9 1833 aaKnown RBP3.31□□□□□ -1.88
CCDC178-213ENST00000583930 BAZ2BQ9UIF8 2168 aaKnown RBP3.31□□□□□ -1.88
CCDC178-213ENST00000583930 A0A1W2PQJ5 194 aa3.3□□□□□ -1.88
CCDC178-213ENST00000583930 FAM229AH3BQW9 127 aa3.3□□□□□ -1.88
CCDC178-213ENST00000583930 M0QZQ0 153 aa3.3□□□□□ -1.88
CCDC178-213ENST00000583930 STX10O60499 249 aa3.3□□□□□ -1.88
CCDC178-213ENST00000583930 TSPAN1O60635 241 aa3.3□□□□□ -1.88
CCDC178-213ENST00000583930 RGS9O75916 674 aaPredicted RBP3.3□□□□□ -1.88
CCDC178-213ENST00000583930 GFPT2O94808 682 aa3.3□□□□□ -1.88
CCDC178-213ENST00000583930 IQCF3P0C7M6 154 aa3.3□□□□□ -1.88
CCDC178-213ENST00000583930 CKBP12277 381 aa3.3□□□□□ -1.88
CCDC178-213ENST00000583930 NME2P22392 152 aa3.3□□□□□ -1.88
CCDC178-213ENST00000583930 HOXA9P31269 272 aa3.3□□□□□ -1.88
CCDC178-213ENST00000583930 HOXA11P31270 313 aaPredicted RBP3.3□□□□□ -1.88
CCDC178-213ENST00000583930 ATICP31939 592 aa3.3□□□□□ -1.88
CCDC178-213ENST00000583930 HNRNPH3P31942 346 aaKnown RBP3.3□□□□□ -1.88
CCDC178-213ENST00000583930 L1CAMP32004 1257 aa3.3□□□□□ -1.88
CCDC178-213ENST00000583930 RPL9P32969 192 aaKnown RBP3.3□□□□□ -1.88
CCDC178-213ENST00000583930 KCNJ6P48051 423 aa3.3□□□□□ -1.88
CCDC178-213ENST00000583930 GIPRP48546 466 aa3.3□□□□□ -1.88
CCDC178-213ENST00000583930 CDK17Q00537 523 aa3.3□□□□□ -1.88
CCDC178-213ENST00000583930 PSMD6Q15008 389 aa3.3□□□□□ -1.88
CCDC178-213ENST00000583930 POSTNQ15063 836 aa3.3□□□□□ -1.88
CCDC178-213ENST00000583930 LY6KQ17RY6 165 aa3.3□□□□□ -1.88
CCDC178-213ENST00000583930 PRR16Q569H4 304 aa3.3□□□□□ -1.88
CCDC178-213ENST00000583930 CCDC183Q5T5S1 534 aa3.3□□□□□ -1.88
CCDC178-213ENST00000583930 OVOS1Q6IE37 1185 aa3.3□□□□□ -1.88
CCDC178-213ENST00000583930 LRRC55Q6ZSA7 311 aa3.3□□□□□ -1.88
CCDC178-213ENST00000583930 APTXQ7Z2E3 356 aaKnown RBP3.3□□□□□ -1.88
CCDC178-213ENST00000583930 DMRTC2Q8IXT2 367 aaPredicted RBP3.3□□□□□ -1.88
CCDC178-213ENST00000583930 RPUSD2Q8IZ73 545 aaKnown RBP3.3□□□□□ -1.88
CCDC178-213ENST00000583930 LRRC52Q8N7C0 313 aa3.3□□□□□ -1.88
CCDC178-213ENST00000583930 ENOX1Q8TC92 643 aaKnown RBP3.3□□□□□ -1.88
CCDC178-213ENST00000583930 SYN2Q92777 582 aaPredicted RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms