RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 ASS1P00966 412 aaKnown RBP11.75□□□□□ -0.53
TOP3A-216ENST00000583804 GYPCP04921 128 aa11.75□□□□□ -0.53
TOP3A-216ENST00000583804 RB1P06400 928 aa11.75□□□□□ -0.53
TOP3A-216ENST00000583804 PNMA6AP0CW24 399 aaPredicted RBP11.75□□□□□ -0.53
TOP3A-216ENST00000583804 TRIM21P19474 475 aaKnown RBP11.75□□□□□ -0.53
TOP3A-216ENST00000583804 PAX3P23760 479 aa11.75□□□□□ -0.53
TOP3A-216ENST00000583804 CASP14P31944 242 aa11.75□□□□□ -0.53
TOP3A-216ENST00000583804 FXR1P51114 621 aaKnown RBP eCLIP11.75□□□□□ -0.53
TOP3A-216ENST00000583804 NOP14P78316 857 aaKnown RBP11.75□□□□□ -0.53
TOP3A-216ENST00000583804 FAM171A1Q5VUB5 890 aa11.75□□□□□ -0.53
TOP3A-216ENST00000583804 FUT10Q6P4F1 479 aa11.75□□□□□ -0.53
TOP3A-216ENST00000583804 CEP57Q86XR8 500 aa11.75□□□□□ -0.53
TOP3A-216ENST00000583804 FBXO22Q8NEZ5 403 aa11.75□□□□□ -0.53
TOP3A-216ENST00000583804 NEK11Q8NG66 645 aa11.75□□□□□ -0.53
TOP3A-216ENST00000583804 SENP8Q96LD8 212 aa11.75□□□□□ -0.53
TOP3A-216ENST00000583804 ALG13Q9NP73 1137 aaKnown RBP11.75□□□□□ -0.53
TOP3A-216ENST00000583804 PUF60Q9UHX1 559 aaKnown RBP11.75□□□□□ -0.53
TOP3A-216ENST00000583804 SF3B1O75533 1304 aaKnown RBP eCLIP11.74□□□□□ -0.536e-10■■■■■ 187.2
TOP3A-216ENST00000583804 FAM170AA1A519 330 aa11.74□□□□□ -0.53
TOP3A-216ENST00000583804 HUS1O60921 280 aa11.74□□□□□ -0.53
TOP3A-216ENST00000583804 CSPG5O95196 566 aa11.74□□□□□ -0.53
TOP3A-216ENST00000583804 STAU1O95793 577 aaKnown RBP11.74□□□□□ -0.53
TOP3A-216ENST00000583804 P4HA1P13674 534 aa11.74□□□□□ -0.53
TOP3A-216ENST00000583804 PON1P27169 355 aa11.74□□□□□ -0.53
TOP3A-216ENST00000583804 POLR2FP61218 127 aaKnown RBP11.74□□□□□ -0.53
TOP3A-216ENST00000583804 PLCB3Q01970 1234 aa11.74□□□□□ -0.53
TOP3A-216ENST00000583804 ELAVL2Q12926 359 aaKnown RBP11.74□□□□□ -0.53
TOP3A-216ENST00000583804 GPM6BQ13491 265 aa11.74□□□□□ -0.53
TOP3A-216ENST00000583804 RAPGEF1Q13905 1077 aa11.74□□□□□ -0.53
TOP3A-216ENST00000583804 KIAA1841Q6NSI8 718 aa11.74□□□□□ -0.53
TOP3A-216ENST00000583804 RRAGAQ7L523 313 aa11.74□□□□□ -0.53
TOP3A-216ENST00000583804 TAS1R1Q7RTX1 841 aa11.74□□□□□ -0.53
TOP3A-216ENST00000583804 ARHGEF19Q8IW93 802 aa11.74□□□□□ -0.53
TOP3A-216ENST00000583804 LMO3Q8TAP4 145 aa11.74□□□□□ -0.53
TOP3A-216ENST00000583804 TATDN2Q93075 761 aa11.74□□□□□ -0.53
TOP3A-216ENST00000583804 B3GALT6Q96L58 329 aa11.74□□□□□ -0.53
TOP3A-216ENST00000583804 NT5C1BQ96P26 610 aa11.74□□□□□ -0.53
TOP3A-216ENST00000583804 ERGIC2Q96RQ1 377 aa11.74□□□□□ -0.53
TOP3A-216ENST00000583804 C11orf84Q9BUA3 381 aaPredicted RBP11.74□□□□□ -0.53
TOP3A-216ENST00000583804 GPR62Q9BZJ7 368 aa11.74□□□□□ -0.53
TOP3A-216ENST00000583804 VRTNQ9H8Y1 702 aa11.74□□□□□ -0.53
TOP3A-216ENST00000583804 APOBEC3GQ9HC16 384 aaKnown RBP11.74□□□□□ -0.53
TOP3A-216ENST00000583804 POLIQ9UNA4 740 aa11.74□□□□□ -0.53
TOP3A-216ENST00000583804 TIMM13Q9Y5L4 95 aaPredicted RBP11.74□□□□□ -0.53
TOP3A-216ENST00000583804 FHOD1Q9Y613 1164 aa11.74□□□□□ -0.53
TOP3A-216ENST00000583804 GBF1Q92538 1859 aa11.74□□□□□ -0.53
TOP3A-216ENST00000583804 A0A1W2PQC6 194 aa11.73□□□□□ -0.53
TOP3A-216ENST00000583804 GOLGA6L6A8MZA4 724 aa11.73□□□□□ -0.53
TOP3A-216ENST00000583804 C5orf67F2Z3F1 127 aa11.73□□□□□ -0.53
TOP3A-216ENST00000583804 ODC1P11926 461 aa11.73□□□□□ -0.53
TOP3A-216ENST00000583804 CA8P35219 290 aa11.73□□□□□ -0.53
TOP3A-216ENST00000583804 AARSP49588 968 aaKnown RBP eCLIP11.73□□□□□ -0.53
TOP3A-216ENST00000583804 CDH8P55286 799 aa11.73□□□□□ -0.53
TOP3A-216ENST00000583804 ARHGAP44Q17R89 818 aa11.73□□□□□ -0.53
TOP3A-216ENST00000583804 TRIM65Q6PJ69 517 aa11.73□□□□□ -0.53
TOP3A-216ENST00000583804 SCARA5Q6ZMJ2 495 aa11.73□□□□□ -0.53
TOP3A-216ENST00000583804 CACNA2D4Q7Z3S7 1137 aa11.73□□□□□ -0.53
TOP3A-216ENST00000583804 DDX53Q86TM3 631 aaKnown RBP11.73□□□□□ -0.53
TOP3A-216ENST00000583804 METTL23Q86XA0 190 aa11.73□□□□□ -0.53
TOP3A-216ENST00000583804 VPS52Q8N1B4 723 aa11.73□□□□□ -0.53
TOP3A-216ENST00000583804 SPPL3Q8TCT6 385 aa11.73□□□□□ -0.53
TOP3A-216ENST00000583804 POF1BQ8WVV4 589 aa11.73□□□□□ -0.53
TOP3A-216ENST00000583804 KAT5Q92993 513 aa11.73□□□□□ -0.53
TOP3A-216ENST00000583804 SUSD3Q96L08 255 aa11.73□□□□□ -0.53
TOP3A-216ENST00000583804 GANQ9H2C0 597 aa11.73□□□□□ -0.53
TOP3A-216ENST00000583804 SIX2Q9NPC8 291 aa11.73□□□□□ -0.53
TOP3A-216ENST00000583804 GDAP2Q9NXN4 497 aa11.73□□□□□ -0.53
TOP3A-216ENST00000583804 PCDHB8Q9UN66 801 aa11.73□□□□□ -0.53
TOP3A-216ENST00000583804 ITIH6Q6UXX5 1313 aa11.73□□□□□ -0.53
TOP3A-216ENST00000583804 ARHGEF37A1IGU5 675 aa11.72□□□□□ -0.53
TOP3A-216ENST00000583804 AKR1B15C9JRZ8 316 aaPredicted RBP11.72□□□□□ -0.53
TOP3A-216ENST00000583804 C2CD2LO14523 706 aa11.72□□□□□ -0.53
TOP3A-216ENST00000583804 GRM6O15303 877 aa11.72□□□□□ -0.53
TOP3A-216ENST00000583804 MFAP3LO75121 409 aa11.72□□□□□ -0.53
TOP3A-216ENST00000583804 NOL4O94818 638 aa11.72□□□□□ -0.53
TOP3A-216ENST00000583804 SOD2P04179 222 aa11.72□□□□□ -0.53
TOP3A-216ENST00000583804 TPM1P09493 284 aa11.72□□□□□ -0.53
TOP3A-216ENST00000583804 WEE2P0C1S8 567 aa11.72□□□□□ -0.53
TOP3A-216ENST00000583804 TKTP29401 623 aaKnown RBP11.72□□□□□ -0.53
TOP3A-216ENST00000583804 RAP1GAPP47736 663 aa11.72□□□□□ -0.53
TOP3A-216ENST00000583804 TBX2Q13207 712 aaPredicted RBP11.72□□□□□ -0.53
TOP3A-216ENST00000583804 SOWAHAQ2M3V2 549 aa11.72□□□□□ -0.53
TOP3A-216ENST00000583804 USP41Q3LFD5 358 aa11.72□□□□□ -0.53
TOP3A-216ENST00000583804 WSCD1Q658N2 575 aa11.72□□□□□ -0.53
TOP3A-216ENST00000583804 IQCEQ6IPM2 695 aa11.72□□□□□ -0.53
TOP3A-216ENST00000583804 PHLDB3Q6NSJ2 640 aa11.72□□□□□ -0.53
TOP3A-216ENST00000583804 PPM1KQ8N3J5 372 aa11.72□□□□□ -0.53
TOP3A-216ENST00000583804 APPL2Q8NEU8 664 aa11.72□□□□□ -0.53
TOP3A-216ENST00000583804 MICAL1Q8TDZ2 1067 aa11.72□□□□□ -0.53
TOP3A-216ENST00000583804 TTPALQ9BTX7 342 aa11.72□□□□□ -0.53
TOP3A-216ENST00000583804 VN1R3Q9BXE9 311 aa11.72□□□□□ -0.53
TOP3A-216ENST00000583804 NIF3L1Q9GZT8 377 aa11.72□□□□□ -0.53
TOP3A-216ENST00000583804 ZNF576Q9H609 170 aa11.72□□□□□ -0.53
TOP3A-216ENST00000583804 SMYD3Q9H7B4 428 aa11.72□□□□□ -0.53
TOP3A-216ENST00000583804 UBE2TQ9NPD8 197 aaPredicted RBP11.72□□□□□ -0.53
TOP3A-216ENST00000583804 L1RE1Q9UN81 338 aa11.72□□□□□ -0.53
TOP3A-216ENST00000583804 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.72□□□□□ -0.537e-6■■■■□ 21
TOP3A-216ENST00000583804 TRIOBPQ9H2D6 2365 aa11.72□□□□□ -0.53
TOP3A-216ENST00000583804 H3BNC9 293 aa11.71□□□□□ -0.53
TOP3A-216ENST00000583804 M0QZQ0 153 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms