RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 PPP1R10Q96QC0 940 aaKnown RBP8.56□□□□□ -1.04
SMCHD1-210ENST00000583800 NACC1Q96RE7 527 aa8.56□□□□□ -1.04
SMCHD1-210ENST00000583800 POLR3CQ9BUI4 534 aaPredicted RBP8.56□□□□□ -1.04
SMCHD1-210ENST00000583800 PLA2G2FQ9BZM2 168 aa8.56□□□□□ -1.04
SMCHD1-210ENST00000583800 HEBP1Q9NRV9 189 aa8.56□□□□□ -1.04
SMCHD1-210ENST00000583800 NCDNQ9UBB6 729 aa8.56□□□□□ -1.04
SMCHD1-210ENST00000583800 FBXO4Q9UKT5 387 aa8.56□□□□□ -1.04
SMCHD1-210ENST00000583800 KCNH3Q9ULD8 1083 aa8.56□□□□□ -1.04
SMCHD1-210ENST00000583800 MRPS23Q9Y3D9 190 aaKnown RBP8.56□□□□□ -1.04
SMCHD1-210ENST00000583800 GPSM3Q9Y4H4 160 aa8.56□□□□□ -1.04
SMCHD1-210ENST00000583800 SPTBN2O15020 2390 aa8.56□□□□□ -1.04
SMCHD1-210ENST00000583800 KIF26AQ9ULI4 1882 aaPredicted RBP8.55□□□□□ -1.04
SMCHD1-210ENST00000583800 WDR27A2RRH5 827 aa8.55□□□□□ -1.04
SMCHD1-210ENST00000583800 ECI2O75521 394 aa8.55□□□□□ -1.04
SMCHD1-210ENST00000583800 OR52Z1P0C646 297 aa8.55□□□□□ -1.04
SMCHD1-210ENST00000583800 RPA1P27694 616 aa8.55□□□□□ -1.04
SMCHD1-210ENST00000583800 ATP1A2P50993 1020 aa8.55□□□□□ -1.04
SMCHD1-210ENST00000583800 OSTNP61366 133 aa8.55□□□□□ -1.04
SMCHD1-210ENST00000583800 ROR1Q01973 937 aa8.55□□□□□ -1.04
SMCHD1-210ENST00000583800 GRM2Q14416 872 aa8.55□□□□□ -1.04
SMCHD1-210ENST00000583800 PPP2R5AQ15172 486 aa8.55□□□□□ -1.04
SMCHD1-210ENST00000583800 ZNF174Q15697 407 aa8.55□□□□□ -1.04
SMCHD1-210ENST00000583800 UPP1Q16831 310 aa8.55□□□□□ -1.04
SMCHD1-210ENST00000583800 RSPO4Q2I0M5 234 aaPredicted RBP8.55□□□□□ -1.04
SMCHD1-210ENST00000583800 UVSSAQ2YD98 709 aa8.55□□□□□ -1.04
SMCHD1-210ENST00000583800 ZNF528Q3MIS6 628 aa8.55□□□□□ -1.04
SMCHD1-210ENST00000583800 ZBTB41Q5SVQ8 909 aa8.55□□□□□ -1.04
SMCHD1-210ENST00000583800 ATF7IP2Q5U623 682 aa8.55□□□□□ -1.04
SMCHD1-210ENST00000583800 TANGO2Q6ICL3 276 aa8.55□□□□□ -1.04
SMCHD1-210ENST00000583800 ANKS3Q6ZW76 656 aa8.55□□□□□ -1.04
SMCHD1-210ENST00000583800 OSBPL6Q9BZF3 934 aa8.55□□□□□ -1.04
SMCHD1-210ENST00000583800 DLL3Q9NYJ7 618 aa8.55□□□□□ -1.04
SMCHD1-210ENST00000583800 BACE2Q9Y5Z0 518 aa8.55□□□□□ -1.04
SMCHD1-210ENST00000583800 NUP210Q8TEM1 1887 aaPredicted RBP8.54□□□□□ -1.04
SMCHD1-210ENST00000583800 SMIM28A0A1B0GU29 152 aa8.54□□□□□ -1.04
SMCHD1-210ENST00000583800 ARHGEF37A1IGU5 675 aa8.54□□□□□ -1.04
SMCHD1-210ENST00000583800 SHISA7A6NL88 538 aa8.54□□□□□ -1.04
SMCHD1-210ENST00000583800 PODXLO00592 558 aa8.54□□□□□ -1.04
SMCHD1-210ENST00000583800 LRG1P02750 347 aa8.54□□□□□ -1.04
SMCHD1-210ENST00000583800 FCARP24071 287 aa8.54□□□□□ -1.04
SMCHD1-210ENST00000583800 ERCC5P28715 1186 aaPredicted RBP8.54□□□□□ -1.04
SMCHD1-210ENST00000583800 MAGEA9P43362 315 aa8.54□□□□□ -1.04
SMCHD1-210ENST00000583800 ARPP19P56211 112 aa8.54□□□□□ -1.04
SMCHD1-210ENST00000583800 ANAPC15P60006 121 aa8.54□□□□□ -1.04
SMCHD1-210ENST00000583800 PTPRNQ16849 979 aa8.54□□□□□ -1.04
SMCHD1-210ENST00000583800 ZNF568Q3ZCX4 644 aa8.54□□□□□ -1.04
SMCHD1-210ENST00000583800 PRSS36Q5K4E3 855 aa8.54□□□□□ -1.04
SMCHD1-210ENST00000583800 HAUS3Q68CZ6 603 aa8.54□□□□□ -1.04
SMCHD1-210ENST00000583800 SLC8B1Q6J4K2 584 aa8.54□□□□□ -1.04
SMCHD1-210ENST00000583800 ZBTB44Q8NCP5 570 aa8.54□□□□□ -1.04
SMCHD1-210ENST00000583800 ERMNQ8TAM6 284 aa8.54□□□□□ -1.04
SMCHD1-210ENST00000583800 ATRIPQ8WXE1 791 aa8.54□□□□□ -1.04
SMCHD1-210ENST00000583800 CLDN23Q96B33 292 aa8.54□□□□□ -1.04
SMCHD1-210ENST00000583800 TCEAL4Q96EI5 215 aa8.54□□□□□ -1.04
SMCHD1-210ENST00000583800 IFT74Q96LB3 600 aa8.54□□□□□ -1.04
SMCHD1-210ENST00000583800 UROC1Q96N76 676 aa8.54□□□□□ -1.04
SMCHD1-210ENST00000583800 CORO1BQ9BR76 489 aa8.54□□□□□ -1.04
SMCHD1-210ENST00000583800 BACH2Q9BYV9 841 aa8.54□□□□□ -1.04
SMCHD1-210ENST00000583800 CDT1Q9H211 546 aa8.54□□□□□ -1.04
SMCHD1-210ENST00000583800 BHMT2Q9H2M3 363 aa8.54□□□□□ -1.04
SMCHD1-210ENST00000583800 PRMT8Q9NR22 394 aaPredicted RBP8.54□□□□□ -1.04
SMCHD1-210ENST00000583800 ZSCAN32Q9NX65 697 aa8.54□□□□□ -1.04
SMCHD1-210ENST00000583800 MAP10Q9P2G4 905 aa8.54□□□□□ -1.04
SMCHD1-210ENST00000583800 SMG5Q9UPR3 1016 aaKnown RBP8.54□□□□□ -1.04
SMCHD1-210ENST00000583800 PCDHGA2Q9Y5H1 932 aa8.54□□□□□ -1.04
SMCHD1-210ENST00000583800 CACNA1BQ00975 2339 aa8.54□□□□□ -1.04
SMCHD1-210ENST00000583800 TSC2P49815 1807 aa8.54□□□□□ -1.04
SMCHD1-210ENST00000583800 PHLPP2Q6ZVD8 1323 aa8.54□□□□□ -1.04
SMCHD1-210ENST00000583800 CCDC169A6NNP5 214 aa8.53□□□□□ -1.04
SMCHD1-210ENST00000583800 PRRG1O14668 218 aa8.53□□□□□ -1.04
SMCHD1-210ENST00000583800 TRAPPC3O43617 180 aa8.53□□□□□ -1.04
SMCHD1-210ENST00000583800 LILRB5O75023 590 aa8.53□□□□□ -1.04
SMCHD1-210ENST00000583800 ABLIM3O94929 683 aa8.53□□□□□ -1.04
SMCHD1-210ENST00000583800 SEC24AO95486 1093 aa8.53□□□□□ -1.04
SMCHD1-210ENST00000583800 PTPN2P17706 415 aa8.53□□□□□ -1.04
SMCHD1-210ENST00000583800 ELF1P32519 619 aa8.53□□□□□ -1.04
SMCHD1-210ENST00000583800 CCT6AP40227 531 aaKnown RBP8.53□□□□□ -1.04
SMCHD1-210ENST00000583800 GRM5P41594 1212 aa8.53□□□□□ -1.04
SMCHD1-210ENST00000583800 CCR2P41597 374 aa8.53□□□□□ -1.04
SMCHD1-210ENST00000583800 RPS9P46781 194 aaKnown RBP8.53□□□□□ -1.04
SMCHD1-210ENST00000583800 EFNA5P52803 228 aa8.53□□□□□ -1.04
SMCHD1-210ENST00000583800 YARSP54577 528 aaKnown RBP8.53□□□□□ -1.04
SMCHD1-210ENST00000583800 ADCY1Q08828 1119 aa8.53□□□□□ -1.04
SMCHD1-210ENST00000583800 MTAPQ13126 283 aa8.53□□□□□ -1.04
SMCHD1-210ENST00000583800 FZD5Q13467 585 aa8.53□□□□□ -1.04
SMCHD1-210ENST00000583800 MRPL58Q14197 206 aaKnown RBP8.53□□□□□ -1.04
SMCHD1-210ENST00000583800 ZNF852Q6ZMS4 543 aa8.53□□□□□ -1.04
SMCHD1-210ENST00000583800 ZNF461Q8TAF7 563 aa8.53□□□□□ -1.04
SMCHD1-210ENST00000583800 NELL1Q92832 810 aa8.53□□□□□ -1.04
SMCHD1-210ENST00000583800 KIFAP3Q92845 792 aa8.53□□□□□ -1.04
SMCHD1-210ENST00000583800 DNASE1L2Q92874 299 aa8.53□□□□□ -1.04
SMCHD1-210ENST00000583800 ELSPBP1Q96BH3 223 aa8.53□□□□□ -1.04
SMCHD1-210ENST00000583800 ZMAT2Q96NC0 199 aaKnown RBP8.53□□□□□ -1.04
SMCHD1-210ENST00000583800 CCDC94Q9BW85 323 aaPredicted RBP8.53□□□□□ -1.04
SMCHD1-210ENST00000583800 EPC1Q9H2F5 836 aa8.53□□□□□ -1.04
SMCHD1-210ENST00000583800 CYP4F11Q9HBI6 524 aa8.53□□□□□ -1.04
SMCHD1-210ENST00000583800 AVENQ9NQS1 362 aaPredicted RBP8.53□□□□□ -1.04
SMCHD1-210ENST00000583800 TOPORSQ9NS56 1045 aaPredicted RBP8.53□□□□□ -1.04
SMCHD1-210ENST00000583800 GDE1Q9NZC3 331 aa8.53□□□□□ -1.04
SMCHD1-210ENST00000583800 FBXL5Q9UKA1 691 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms