RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 C2orf15Q8WU43 125 aaKnown RBP9.99□□□□□ -0.81
UBBP4-201ENST00000583708 POF1BQ8WVV4 589 aa9.99□□□□□ -0.81
UBBP4-201ENST00000583708 NT5C1BQ96P26 610 aa9.99□□□□□ -0.81
UBBP4-201ENST00000583708 ERGIC2Q96RQ1 377 aa9.99□□□□□ -0.81
UBBP4-201ENST00000583708 GAS2L1Q99501 681 aaPredicted RBP9.99□□□□□ -0.81
UBBP4-201ENST00000583708 ACBD6Q9BR61 282 aa9.99□□□□□ -0.81
UBBP4-201ENST00000583708 PAAF1Q9BRP4 392 aa9.99□□□□□ -0.81
UBBP4-201ENST00000583708 GPR62Q9BZJ7 368 aa9.99□□□□□ -0.81
UBBP4-201ENST00000583708 EDEM3Q9BZQ6 932 aa9.99□□□□□ -0.81
UBBP4-201ENST00000583708 NIF3L1Q9GZT8 377 aa9.99□□□□□ -0.81
UBBP4-201ENST00000583708 ZBP1Q9H171 429 aa9.99□□□□□ -0.81
UBBP4-201ENST00000583708 HSD3B7Q9H2F3 369 aa9.99□□□□□ -0.81
UBBP4-201ENST00000583708 GOLGA2P5Q9HBQ8 144 aa9.99□□□□□ -0.81
UBBP4-201ENST00000583708 RTN4Q9NQC3 1192 aaKnown RBP9.99□□□□□ -0.81
UBBP4-201ENST00000583708 HSFX1Q9UBD0 423 aa9.99□□□□□ -0.81
UBBP4-201ENST00000583708 SNX9Q9Y5X1 595 aa9.99□□□□□ -0.81
UBBP4-201ENST00000583708 TDRD15B5MCY1 1934 aaKnown RBP9.98□□□□□ -0.81
UBBP4-201ENST00000583708 PTPRSQ13332 1948 aa9.98□□□□□ -0.81
UBBP4-201ENST00000583708 A0A1B0GTH6 734 aa9.98□□□□□ -0.81
UBBP4-201ENST00000583708 NT5C1B-RDH14C9J2C7 533 aa9.98□□□□□ -0.81
UBBP4-201ENST00000583708 TULP1O00294 542 aaPredicted RBP9.98□□□□□ -0.81
UBBP4-201ENST00000583708 TBC1D4O60343 1298 aa9.98□□□□□ -0.81
UBBP4-201ENST00000583708 ADH1AP07327 375 aa9.98□□□□□ -0.81
UBBP4-201ENST00000583708 MFAP3P55082 362 aa9.98□□□□□ -0.81
UBBP4-201ENST00000583708 NOP14P78316 857 aaKnown RBP9.98□□□□□ -0.81
UBBP4-201ENST00000583708 NFE2Q16621 373 aaPredicted RBP9.98□□□□□ -0.81
UBBP4-201ENST00000583708 CBWD6Q4V339 395 aa9.98□□□□□ -0.81
UBBP4-201ENST00000583708 CBWD3Q5JTY5 395 aa9.98□□□□□ -0.81
UBBP4-201ENST00000583708 CBWD5Q5RIA9 395 aa9.98□□□□□ -0.81
UBBP4-201ENST00000583708 LMBRD2Q68DH5 695 aaPredicted RBP9.98□□□□□ -0.81
UBBP4-201ENST00000583708 OVOS1Q6IE37 1185 aa9.98□□□□□ -0.81
UBBP4-201ENST00000583708 SARM1Q6SZW1 724 aa9.98□□□□□ -0.81
UBBP4-201ENST00000583708 APTXQ7Z2E3 356 aaKnown RBP9.98□□□□□ -0.81
UBBP4-201ENST00000583708 LUZP1Q86V48 1076 aa9.98□□□□□ -0.81
UBBP4-201ENST00000583708 DCP1BQ8IZD4 617 aaKnown RBP9.98□□□□□ -0.81
UBBP4-201ENST00000583708 C3orf58Q8NDZ4 430 aa9.98□□□□□ -0.81
UBBP4-201ENST00000583708 LMO3Q8TAP4 145 aa9.98□□□□□ -0.81
UBBP4-201ENST00000583708 MICAL1Q8TDZ2 1067 aa9.98□□□□□ -0.81
UBBP4-201ENST00000583708 TNIP3Q96KP6 325 aa9.98□□□□□ -0.81
UBBP4-201ENST00000583708 CEP295NLQ96MC4 621 aa9.98□□□□□ -0.81
UBBP4-201ENST00000583708 NUP58Q9BVL2 599 aa9.98□□□□□ -0.81
UBBP4-201ENST00000583708 BCO2Q9BYV7 579 aa9.98□□□□□ -0.81
UBBP4-201ENST00000583708 PCDH10Q9P2E7 1040 aa9.98□□□□□ -0.81
UBBP4-201ENST00000583708 MTRRQ9UBK8 725 aa9.98□□□□□ -0.81
UBBP4-201ENST00000583708 LAMA2P24043 3122 aaKnown RBP9.98□□□□□ -0.81
UBBP4-201ENST00000583708 PES1O00541 588 aaKnown RBP9.97□□□□□ -0.81
UBBP4-201ENST00000583708 SPTLC1O15269 473 aa9.97□□□□□ -0.81
UBBP4-201ENST00000583708 GRM6O15303 877 aa9.97□□□□□ -0.81
UBBP4-201ENST00000583708 ARHGEF15O94989 841 aa9.97□□□□□ -0.81
UBBP4-201ENST00000583708 SRGAP2BP0DMP2 458 aa9.97□□□□□ -0.81
UBBP4-201ENST00000583708 PON1P27169 355 aa9.97□□□□□ -0.81
UBBP4-201ENST00000583708 GNL1P36915 607 aaPredicted RBP9.97□□□□□ -0.81
UBBP4-201ENST00000583708 NDUFV1P49821 464 aa9.97□□□□□ -0.81
UBBP4-201ENST00000583708 GUCY2FP51841 1108 aa9.97□□□□□ -0.81
UBBP4-201ENST00000583708 UBASH3AP57075 661 aa9.97□□□□□ -0.81
UBBP4-201ENST00000583708 FANCCQ00597 558 aa9.97□□□□□ -0.81
UBBP4-201ENST00000583708 TSPY1Q01534 308 aa9.97□□□□□ -0.81
UBBP4-201ENST00000583708 UBXN1Q04323 297 aa9.97□□□□□ -0.81
UBBP4-201ENST00000583708 INCA1Q0VD86 236 aa9.97□□□□□ -0.81
UBBP4-201ENST00000583708 RAB33AQ14088 237 aa9.97□□□□□ -0.81
UBBP4-201ENST00000583708 NR1I3Q14994 352 aa9.97□□□□□ -0.81
UBBP4-201ENST00000583708 PTPN14Q15678 1187 aa9.97□□□□□ -0.81
UBBP4-201ENST00000583708 SOWAHAQ2M3V2 549 aa9.97□□□□□ -0.81
UBBP4-201ENST00000583708 FIGNQ5HY92 759 aa9.97□□□□□ -0.81
UBBP4-201ENST00000583708 VARS2Q5ST30 1063 aaKnown RBP9.97□□□□□ -0.81
UBBP4-201ENST00000583708 SLC8B1Q6J4K2 584 aa9.97□□□□□ -0.81
UBBP4-201ENST00000583708 TRIM65Q6PJ69 517 aa9.97□□□□□ -0.81
UBBP4-201ENST00000583708 CYP26C1Q6V0L0 522 aa9.97□□□□□ -0.81
UBBP4-201ENST00000583708 TMEM173Q86WV6 379 aaPredicted RBP9.97□□□□□ -0.81
UBBP4-201ENST00000583708 ADGRF2Q8IZF7 708 aa9.97□□□□□ -0.81
UBBP4-201ENST00000583708 CRYBG2Q8N1P7 616 aa9.97□□□□□ -0.81
UBBP4-201ENST00000583708 PDCL2Q8N4E4 241 aa9.97□□□□□ -0.81
UBBP4-201ENST00000583708 LNX1Q8TBB1 728 aaPredicted RBP9.97□□□□□ -0.81
UBBP4-201ENST00000583708 BCL7CQ8WUZ0 217 aaPredicted RBP9.97□□□□□ -0.81
UBBP4-201ENST00000583708 RIN2Q8WYP3 895 aaPredicted RBP9.97□□□□□ -0.81
UBBP4-201ENST00000583708 MMS19Q96T76 1030 aa9.97□□□□□ -0.81
UBBP4-201ENST00000583708 TCF25Q9BQ70 676 aa9.97□□□□□ -0.81
UBBP4-201ENST00000583708 INTS2Q9H0H0 1204 aaKnown RBP9.97□□□□□ -0.81
UBBP4-201ENST00000583708 NUCKS1Q9H1E3 243 aaKnown RBP9.97□□□□□ -0.81
UBBP4-201ENST00000583708 VPS16Q9H269 839 aa9.97□□□□□ -0.81
UBBP4-201ENST00000583708 TTYH1Q9H313 450 aaPredicted RBP9.97□□□□□ -0.81
UBBP4-201ENST00000583708 SNX25Q9H3E2 840 aa9.97□□□□□ -0.81
UBBP4-201ENST00000583708 NSUN3Q9H649 340 aaKnown RBP9.97□□□□□ -0.81
UBBP4-201ENST00000583708 ALG13Q9NP73 1137 aaKnown RBP9.97□□□□□ -0.81
UBBP4-201ENST00000583708 ENTPD7Q9NQZ7 604 aa9.97□□□□□ -0.81
UBBP4-201ENST00000583708 GCNT4Q9P109 453 aa9.97□□□□□ -0.81
UBBP4-201ENST00000583708 HCSTQ9UBK5 93 aa9.97□□□□□ -0.81
UBBP4-201ENST00000583708 APEX2Q9UBZ4 518 aa9.97□□□□□ -0.81
UBBP4-201ENST00000583708 CDH9Q9ULB4 789 aa9.97□□□□□ -0.81
UBBP4-201ENST00000583708 MYO6Q9UM54 1294 aa9.97□□□□□ -0.81
UBBP4-201ENST00000583708 BARX2Q9UMQ3 279 aaPredicted RBP9.97□□□□□ -0.81
UBBP4-201ENST00000583708 CHD9Q3L8U1 2897 aa9.97□□□□□ -0.81
UBBP4-201ENST00000583708 TRIP11Q15643 1979 aa9.97□□□□□ -0.81
UBBP4-201ENST00000583708 ANK1P16157 1881 aa9.96□□□□□ -0.81
UBBP4-201ENST00000583708 PDCD11Q14690 1871 aaKnown RBP9.96□□□□□ -0.81
UBBP4-201ENST00000583708 C2orf71A6NGG8 1288 aa9.96□□□□□ -0.82
UBBP4-201ENST00000583708 PPEF2O14830 753 aa9.96□□□□□ -0.82
UBBP4-201ENST00000583708 CCDC172P0C7W6 258 aa9.96□□□□□ -0.82
UBBP4-201ENST00000583708 PBX3P40426 434 aa9.96□□□□□ -0.82
UBBP4-201ENST00000583708 BRCC3P46736 316 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms