RNA–Protein interactions for RNA: ENST00000583173.5

TSEN54-208, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-208ENST00000583173 WSCD1Q658N2 575 aa23.27■■□□□ 1.32
TSEN54-208ENST00000583173 SLC8B1Q6J4K2 584 aa23.27■■□□□ 1.32
TSEN54-208ENST00000583173 C11orf57Q6ZUT1 292 aaPredicted RBP23.27■■□□□ 1.32
TSEN54-208ENST00000583173 DPH6Q7L8W6 267 aa23.27■■□□□ 1.32
TSEN54-208ENST00000583173 RTP3Q9BQQ7 232 aa23.27■■□□□ 1.32
TSEN54-208ENST00000583173 PRDM6Q9NQX0 595 aa23.27■■□□□ 1.32
TSEN54-208ENST00000583173 CLEC1BQ9P126 229 aa23.27■■□□□ 1.32
TSEN54-208ENST00000583173 FBXL5Q9UKA1 691 aa23.27■■□□□ 1.32
TSEN54-208ENST00000583173 COQ4Q9Y3A0 265 aa23.27■■□□□ 1.32
TSEN54-208ENST00000583173 H7C4K7 107 aa23.26■■□□□ 1.31
TSEN54-208ENST00000583173 LETM1O95202 739 aaPredicted RBP23.26■■□□□ 1.31
TSEN54-208ENST00000583173 HLA-DRAP01903 254 aa23.26■■□□□ 1.31
TSEN54-208ENST00000583173 ODC1P11926 461 aa23.26■■□□□ 1.31
TSEN54-208ENST00000583173 KLRC2P26717 231 aa23.26■■□□□ 1.31
TSEN54-208ENST00000583173 NDUFV1P49821 464 aa23.26■■□□□ 1.31
TSEN54-208ENST00000583173 DLX2Q07687 328 aaPredicted RBP23.26■■□□□ 1.31
TSEN54-208ENST00000583173 TRPC3Q13507 836 aa23.26■■□□□ 1.31
TSEN54-208ENST00000583173 STX1AQ16623 288 aa23.26■■□□□ 1.31
TSEN54-208ENST00000583173 SOWAHAQ2M3V2 549 aa23.26■■□□□ 1.31
TSEN54-208ENST00000583173 SGSM1Q2NKQ1 1148 aa23.26■■□□□ 1.31
TSEN54-208ENST00000583173 PPFIBP1Q86W92 1011 aa23.26■■□□□ 1.31
TSEN54-208ENST00000583173 TOP6BLQ8N6T0 577 aa23.26■■□□□ 1.31
TSEN54-208ENST00000583173 THAP9Q9H5L6 903 aa23.26■■□□□ 1.31
TSEN54-208ENST00000583173 DSEQ9UL01 958 aa23.26■■□□□ 1.31
TSEN54-208ENST00000583173 L1RE1Q9UN81 338 aa23.26■■□□□ 1.31
TSEN54-208ENST00000583173 HCFC2Q9Y5Z7 792 aa23.26■■□□□ 1.31
TSEN54-208ENST00000583173 FSD2A1L4K1 749 aa23.25■■□□□ 1.31
TSEN54-208ENST00000583173 GABRDO14764 452 aa23.25■■□□□ 1.31
TSEN54-208ENST00000583173 STX10O60499 249 aa23.25■■□□□ 1.31
TSEN54-208ENST00000583173 PHACTR2O75167 634 aa23.25■■□□□ 1.31
TSEN54-208ENST00000583173 LRRN2O75325 713 aa23.25■■□□□ 1.31
TSEN54-208ENST00000583173 ADH1AP07327 375 aa23.25■■□□□ 1.31
TSEN54-208ENST00000583173 EPCAMP16422 314 aa23.25■■□□□ 1.31
TSEN54-208ENST00000583173 OR1D2P34982 312 aa23.25■■□□□ 1.31
TSEN54-208ENST00000583173 YWHAHQ04917 246 aaPredicted RBP23.25■■□□□ 1.31
TSEN54-208ENST00000583173 BIRC3Q13489 604 aa23.25■■□□□ 1.31
TSEN54-208ENST00000583173 CBWD6Q4V339 395 aa23.25■■□□□ 1.31
TSEN54-208ENST00000583173 CBWD3Q5JTY5 395 aa23.25■■□□□ 1.31
TSEN54-208ENST00000583173 CBWD5Q5RIA9 395 aa23.25■■□□□ 1.31
TSEN54-208ENST00000583173 KRT39Q6A163 491 aa23.25■■□□□ 1.31
TSEN54-208ENST00000583173 PDCL2Q8N4E4 241 aa23.25■■□□□ 1.31
TSEN54-208ENST00000583173 TAS1R2Q8TE23 839 aa23.25■■□□□ 1.31
TSEN54-208ENST00000583173 SEMA4DQ92854 862 aa23.25■■□□□ 1.31
TSEN54-208ENST00000583173 MSLNLQ96KJ4 702 aa23.25■■□□□ 1.31
TSEN54-208ENST00000583173 OXCT2Q9BYC2 517 aaPredicted RBP23.25■■□□□ 1.31
TSEN54-208ENST00000583173 SNX9Q9Y5X1 595 aa23.25■■□□□ 1.31
TSEN54-208ENST00000583173 BRWD1Q9NSI6 2320 aa23.25■■□□□ 1.31
TSEN54-208ENST00000583173 ARHGEF37A1IGU5 675 aa23.24■■□□□ 1.31
TSEN54-208ENST00000583173 TGM5O43548 720 aa23.24■■□□□ 1.31
TSEN54-208ENST00000583173 ABLIM3O94929 683 aa23.24■■□□□ 1.31
TSEN54-208ENST00000583173 PAPLNO95428 1278 aa23.24■■□□□ 1.31
TSEN54-208ENST00000583173 ASS1P00966 412 aaKnown RBP23.24■■□□□ 1.31
TSEN54-208ENST00000583173 CA8P35219 290 aa23.24■■□□□ 1.31
TSEN54-208ENST00000583173 CCDC40Q4G0X9 1142 aa23.24■■□□□ 1.31
TSEN54-208ENST00000583173 CTXN3Q4LDR2 81 aa23.24■■□□□ 1.31
TSEN54-208ENST00000583173 OVOS1Q6IE37 1185 aa23.24■■□□□ 1.31
TSEN54-208ENST00000583173 SPATA18Q8TC71 538 aa23.24■■□□□ 1.31
TSEN54-208ENST00000583173 TAF4BQ92750 862 aa23.24■■□□□ 1.31
TSEN54-208ENST00000583173 HLA-CQ95604 372 aa23.24■■□□□ 1.31
TSEN54-208ENST00000583173 UBE2ZQ9H832 354 aaPredicted RBP23.24■■□□□ 1.31
TSEN54-208ENST00000583173 COG5Q9UP83 839 aa23.24■■□□□ 1.31
TSEN54-208ENST00000583173 CDY1Q9Y6F8 540 aa23.24■■□□□ 1.31
TSEN54-208ENST00000583173 TBX10O75333 385 aa23.23■■□□□ 1.31
TSEN54-208ENST00000583173 CCDC192P0DO97 292 aa23.23■■□□□ 1.31
TSEN54-208ENST00000583173 WDR72Q3MJ13 1102 aa23.23■■□□□ 1.31
TSEN54-208ENST00000583173 SYCE2Q6PIF2 218 aa23.23■■□□□ 1.31
TSEN54-208ENST00000583173 OSTM1Q86WC4 334 aa23.23■■□□□ 1.31
TSEN54-208ENST00000583173 PALB2Q86YC2 1186 aa23.23■■□□□ 1.31
TSEN54-208ENST00000583173 TMEM86AQ8N2M4 240 aa23.23■■□□□ 1.31
TSEN54-208ENST00000583173 HDAC7Q8WUI4 952 aa23.23■■□□□ 1.31
TSEN54-208ENST00000583173 KBTBD7Q8WVZ9 684 aa23.23■■□□□ 1.31
TSEN54-208ENST00000583173 ELMO3Q96BJ8 720 aa23.23■■□□□ 1.31
TSEN54-208ENST00000583173 APOBEC3GQ9HC16 384 aaKnown RBP23.23■■□□□ 1.31
TSEN54-208ENST00000583173 SAMSN1Q9NSI8 373 aaKnown RBP23.23■■□□□ 1.31
TSEN54-208ENST00000583173 CLDND1Q9NY35 253 aa23.23■■□□□ 1.31
TSEN54-208ENST00000583173 R3HCC1Q9Y3T6 440 aaKnown RBP23.23■■□□□ 1.31
TSEN54-208ENST00000583173 OR6C75A6NL08 312 aa23.22■■□□□ 1.31
TSEN54-208ENST00000583173 HUS1O60921 280 aa23.22■■□□□ 1.31
TSEN54-208ENST00000583173 TACC1O75410 805 aa23.22■■□□□ 1.31
TSEN54-208ENST00000583173 SLC34A2O95436 690 aa23.22■■□□□ 1.31
TSEN54-208ENST00000583173 MXI1P50539 228 aa23.22■■□□□ 1.31
TSEN54-208ENST00000583173 NCAPHQ15003 741 aa23.22■■□□□ 1.31
TSEN54-208ENST00000583173 ZNF280DQ6N043 979 aa23.22■■□□□ 1.31
TSEN54-208ENST00000583173 ANKRD54Q6NXT1 300 aa23.22■■□□□ 1.31
TSEN54-208ENST00000583173 ZNF461Q8TAF7 563 aa23.22■■□□□ 1.31
TSEN54-208ENST00000583173 CASP10Q92851 521 aa23.22■■□□□ 1.31
TSEN54-208ENST00000583173 CNOT6LQ96LI5 555 aaKnown RBP23.22■■□□□ 1.31
TSEN54-208ENST00000583173 DNAJC25Q9H1X3 360 aa23.22■■□□□ 1.31
TSEN54-208ENST00000583173 S1PR5Q9H228 398 aa23.22■■□□□ 1.31
TSEN54-208ENST00000583173 RAB20Q9NX57 234 aa23.22■■□□□ 1.31
TSEN54-208ENST00000583173 POLIQ9UNA4 740 aa23.22■■□□□ 1.31
TSEN54-208ENST00000583173 XIRP2A4UGR9 3374 aa23.21■■□□□ 1.31
TSEN54-208ENST00000583173 VNN2O95498 520 aa23.21■■□□□ 1.31
TSEN54-208ENST00000583173 WARSP23381 471 aaKnown RBP23.21■■□□□ 1.31
TSEN54-208ENST00000583173 FMO5P49326 533 aa23.21■■□□□ 1.31
TSEN54-208ENST00000583173 ROR1Q01973 937 aa23.21■■□□□ 1.31
TSEN54-208ENST00000583173 KCNH2Q12809 1159 aa23.21■■□□□ 1.31
TSEN54-208ENST00000583173 SKIV2LQ15477 1246 aaKnown RBP23.21■■□□□ 1.31
TSEN54-208ENST00000583173 DCAF17Q5H9S7 520 aaPredicted RBP23.21■■□□□ 1.31
TSEN54-208ENST00000583173 TCERG1LQ5VWI1 586 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms