RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 MAGEB5Q9BZ81 275 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 FETUBQ9UGM5 382 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 MYH3P11055 1940 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 ACKR2O00590 384 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 NCAM2O15394 837 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 FAM163BP0C2L3 166 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 CETPP11597 493 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 MAGEA4P43358 317 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 PRKAA2P54646 552 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 TMEM132DQ14C87 1099 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 TFDP3Q5H9I0 405 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 ACBD5Q5T8D3 534 aaPredicted RBP6.16□□□□□ -1.42
RTTN-209ENST00000583043 EMC10Q5UCC4 262 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 MFSD5Q6N075 450 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 DRICH1Q6PGQ1 229 aaPredicted RBP6.16□□□□□ -1.42
RTTN-209ENST00000583043 CLEC10AQ8IUN9 316 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 CFAP61Q8NHU2 1237 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 PARK7Q99497 189 aaKnown RBP6.16□□□□□ -1.42
RTTN-209ENST00000583043 SSU72Q9NP77 194 aaKnown RBP6.16□□□□□ -1.42
RTTN-209ENST00000583043 NEU2Q9Y3R4 380 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 PCDHA2Q9Y5H9 948 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 RAD54BQ9Y620 910 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 EIF4E1BA6NMX2 242 aaKnown RBP6.16□□□□□ -1.42
RTTN-209ENST00000583043 SPATA31C2B4DYI2 1134 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 H3BQF6 201 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 FSBPO95073 299 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 F9P00740 461 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 HMGCRP04035 888 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 CCND1P24385 295 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 GMPSP49915 693 aaPredicted RBP6.16□□□□□ -1.42
RTTN-209ENST00000583043 SV2CQ496J9 727 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 ARSHQ5FYA8 562 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 SCYL2Q6P3W7 929 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 SETD3Q86TU7 594 aaPredicted RBP6.16□□□□□ -1.42
RTTN-209ENST00000583043 LRRC57Q8N9N7 239 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 TMEM161BQ8NDZ6 487 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 EPS8L1Q8TE68 723 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 FAF2Q96CS3 445 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 LRRC37BQ96QE4 947 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 PLEKHA5Q9HAU0 1116 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 BFARQ9NZS9 450 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 IRS2Q9Y4H2 1338 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 ESYT3A0FGR9 886 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 POC1B-GALNT4F8VUJ3 575 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 GOLGA8SH3BPF8 625 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 SASH3O75995 380 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 GPD1P21695 349 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 PCK1P35558 622 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 ZNF280AP59817 542 aaPredicted RBP6.16□□□□□ -1.42
RTTN-209ENST00000583043 PSMC6P62333 389 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 BASP1P80723 227 aaKnown RBP6.16□□□□□ -1.42
RTTN-209ENST00000583043 CDK16Q00536 496 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 PDE1BQ01064 536 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 DNAL1Q4LDG9 190 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 EFHC2Q5JST6 749 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 TEDDM1Q5T9Z0 273 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 DUPD1Q68J44 220 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 UNC93AQ86WB7 457 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 SCG3Q8WXD2 468 aaKnown RBP6.16□□□□□ -1.42
RTTN-209ENST00000583043 SEC16BQ96JE7 1060 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 CNPY3Q9BT09 278 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 TMEM39BQ9GZU3 492 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 EPC1Q9H2F5 836 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 SUDS3Q9H7L9 328 aaPredicted RBP6.16□□□□□ -1.42
RTTN-209ENST00000583043 CYLDQ9NQC7 956 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 ADARB2Q9NS39 739 aaKnown RBP6.16□□□□□ -1.42
RTTN-209ENST00000583043 NXF1Q9UBU9 619 aaKnown RBP6.16□□□□□ -1.42
RTTN-209ENST00000583043 TRIM33Q9UPN9 1127 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 RSPH10B2B2RC85 870 aa6.15□□□□□ -1.42
RTTN-209ENST00000583043 M0QYV0 167 aa6.15□□□□□ -1.42
RTTN-209ENST00000583043 GLI1P08151 1106 aa6.15□□□□□ -1.42
RTTN-209ENST00000583043 RSPH10BP0C881 870 aa6.15□□□□□ -1.42
RTTN-209ENST00000583043 ARSEP51690 589 aa6.15□□□□□ -1.42
RTTN-209ENST00000583043 ERVK-9P63128 1117 aa6.15□□□□□ -1.42
RTTN-209ENST00000583043 BBS9Q3SYG4 887 aa6.15□□□□□ -1.42
RTTN-209ENST00000583043 HSP90AA5PQ58FG0 334 aa6.15□□□□□ -1.42
RTTN-209ENST00000583043 DPH6Q7L8W6 267 aa6.15□□□□□ -1.42
RTTN-209ENST00000583043 RNF149Q8NC42 400 aa6.15□□□□□ -1.42
RTTN-209ENST00000583043 TGS1Q96RS0 853 aaKnown RBP6.15□□□□□ -1.42
RTTN-209ENST00000583043 CALN1Q9BXU9 219 aa6.15□□□□□ -1.42
RTTN-209ENST00000583043 NIFKQ9BYG3 293 aaKnown RBP6.15□□□□□ -1.42
RTTN-209ENST00000583043 TRABDQ9H4I3 376 aa6.15□□□□□ -1.42
RTTN-209ENST00000583043 CARNS1A5YM72 827 aa6.15□□□□□ -1.42
RTTN-209ENST00000583043 HACD1B0YJ81 288 aa6.15□□□□□ -1.42
RTTN-209ENST00000583043 EML1O00423 815 aa6.15□□□□□ -1.42
RTTN-209ENST00000583043 GEMIN4P57678 1058 aaKnown RBP6.15□□□□□ -1.42
RTTN-209ENST00000583043 GPS1Q13098 491 aa6.15□□□□□ -1.42
RTTN-209ENST00000583043 PDK1Q15118 436 aa6.15□□□□□ -1.42
RTTN-209ENST00000583043 MAPRE1Q15691 268 aaKnown RBP6.15□□□□□ -1.42
RTTN-209ENST00000583043 ZACNQ401N2 412 aa6.15□□□□□ -1.42
RTTN-209ENST00000583043 KAZNQ674X7 775 aa6.15□□□□□ -1.42
RTTN-209ENST00000583043 HEATR6Q6AI08 1181 aaKnown RBP6.15□□□□□ -1.42
RTTN-209ENST00000583043 CATSPERGQ6ZRH7 1159 aa6.15□□□□□ -1.42
RTTN-209ENST00000583043 ADAT2Q7Z6V5 191 aaKnown RBP6.15□□□□□ -1.42
RTTN-209ENST00000583043 PALB2Q86YC2 1186 aa6.15□□□□□ -1.42
RTTN-209ENST00000583043 GPC2Q8N158 579 aa6.15□□□□□ -1.42
RTTN-209ENST00000583043 THEM5Q8N1Q8 247 aa6.15□□□□□ -1.42
RTTN-209ENST00000583043 MS4A14Q96JA4 679 aa6.15□□□□□ -1.42
RTTN-209ENST00000583043 CBWD1Q9BRT8 395 aa6.15□□□□□ -1.42
RTTN-209ENST00000583043 MED10Q9BTT4 135 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms