RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 DNAJC12Q9UKB3 198 aa10.22□□□□□ -0.77
RFFL-210ENST00000582308 TRANK1O15050 2925 aa10.22□□□□□ -0.77
RFFL-210ENST00000582308 LAMA3Q16787 3333 aa10.22□□□□□ -0.77
RFFL-210ENST00000582308 ATG2AQ2TAZ0 1938 aa10.21□□□□□ -0.77
RFFL-210ENST00000582308 CLSTN1O94985 981 aa10.21□□□□□ -0.77
RFFL-210ENST00000582308 GYPCP04921 128 aa10.21□□□□□ -0.77
RFFL-210ENST00000582308 CA3P07451 260 aa10.21□□□□□ -0.77
RFFL-210ENST00000582308 P4HA1P13674 534 aa10.21□□□□□ -0.77
RFFL-210ENST00000582308 TRIM21P19474 475 aaKnown RBP10.21□□□□□ -0.77
RFFL-210ENST00000582308 ACO1P21399 889 aaKnown RBP10.21□□□□□ -0.77
RFFL-210ENST00000582308 TBXAS1P24557 533 aaPredicted RBP10.21□□□□□ -0.77
RFFL-210ENST00000582308 BMPR1AP36894 532 aa10.21□□□□□ -0.77
RFFL-210ENST00000582308 FXR1P51114 621 aaKnown RBP eCLIP10.21□□□□□ -0.77
RFFL-210ENST00000582308 JAM2P57087 298 aa10.21□□□□□ -0.77
RFFL-210ENST00000582308 TAP1Q03518 808 aa10.21□□□□□ -0.77
RFFL-210ENST00000582308 DRAP1Q14919 205 aaPredicted RBP10.21□□□□□ -0.77
RFFL-210ENST00000582308 ARHGAP44Q17R89 818 aa10.21□□□□□ -0.77
RFFL-210ENST00000582308 FIGNQ5HY92 759 aa10.21□□□□□ -0.77
RFFL-210ENST00000582308 WSCD1Q658N2 575 aa10.21□□□□□ -0.77
RFFL-210ENST00000582308 FUT10Q6P4F1 479 aa10.21□□□□□ -0.77
RFFL-210ENST00000582308 DSTYKQ6XUX3 929 aa10.21□□□□□ -0.77
RFFL-210ENST00000582308 ENOSF1Q7L5Y1 443 aa10.21□□□□□ -0.77
RFFL-210ENST00000582308 TAS1R1Q7RTX1 841 aa10.21□□□□□ -0.77
RFFL-210ENST00000582308 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.21□□□□□ -0.77
RFFL-210ENST00000582308 PDCL2Q8N4E4 241 aa10.21□□□□□ -0.77
RFFL-210ENST00000582308 TOP6BLQ8N6T0 577 aa10.21□□□□□ -0.77
RFFL-210ENST00000582308 UBR7Q8N806 425 aa10.21□□□□□ -0.77
RFFL-210ENST00000582308 CPLX3Q8WVH0 158 aa10.21□□□□□ -0.77
RFFL-210ENST00000582308 KBTBD7Q8WVZ9 684 aa10.21□□□□□ -0.77
RFFL-210ENST00000582308 BAP1Q92560 729 aa10.21□□□□□ -0.77
RFFL-210ENST00000582308 MMS19Q96T76 1030 aa10.21□□□□□ -0.77
RFFL-210ENST00000582308 MRPL45Q9BRJ2 306 aaKnown RBP10.21□□□□□ -0.77
RFFL-210ENST00000582308 C17orf80Q9BSJ5 609 aa10.21□□□□□ -0.77
RFFL-210ENST00000582308 STK33Q9BYT3 514 aa10.21□□□□□ -0.77
RFFL-210ENST00000582308 PBX4Q9BYU1 374 aa10.21□□□□□ -0.77
RFFL-210ENST00000582308 EDEM3Q9BZQ6 932 aa10.21□□□□□ -0.77
RFFL-210ENST00000582308 GPR88Q9GZN0 384 aa10.21□□□□□ -0.77
RFFL-210ENST00000582308 CYP3A43Q9HB55 503 aa10.21□□□□□ -0.77
RFFL-210ENST00000582308 AAASQ9NRG9 546 aa10.21□□□□□ -0.77
RFFL-210ENST00000582308 CEP72Q9P209 647 aa10.21□□□□□ -0.77
RFFL-210ENST00000582308 CAPN11Q9UMQ6 739 aa10.21□□□□□ -0.77
RFFL-210ENST00000582308 PCDHB8Q9UN66 801 aa10.21□□□□□ -0.77
RFFL-210ENST00000582308 L1RE1Q9UN81 338 aa10.21□□□□□ -0.77
RFFL-210ENST00000582308 NME7Q9Y5B8 376 aa10.21□□□□□ -0.77
RFFL-210ENST00000582308 PCDHB12Q9Y5F1 795 aa10.21□□□□□ -0.77
RFFL-210ENST00000582308 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.21□□□□□ -0.77
RFFL-210ENST00000582308 TIMM13Q9Y5L4 95 aaPredicted RBP10.21□□□□□ -0.77
RFFL-210ENST00000582308 A0A1W2PQJ5 194 aa10.2□□□□□ -0.78
RFFL-210ENST00000582308 CARNS1A5YM72 827 aa10.2□□□□□ -0.78
RFFL-210ENST00000582308 FOXN3O00409 490 aaPredicted RBP10.2□□□□□ -0.78
RFFL-210ENST00000582308 TRAPPC3O43617 180 aa10.2□□□□□ -0.78
RFFL-210ENST00000582308 HUS1O60921 280 aa10.2□□□□□ -0.78
RFFL-210ENST00000582308 TACC1O75410 805 aa10.2□□□□□ -0.78
RFFL-210ENST00000582308 SF3B1O75533 1304 aaKnown RBP eCLIP10.2□□□□□ -0.788e-6■■■■■ 107
RFFL-210ENST00000582308 CYP11A1P05108 521 aa10.2□□□□□ -0.78
RFFL-210ENST00000582308 PNMA6AP0CW24 399 aaPredicted RBP10.2□□□□□ -0.78
RFFL-210ENST00000582308 ODC1P11926 461 aa10.2□□□□□ -0.78
RFFL-210ENST00000582308 CD58P19256 250 aa10.2□□□□□ -0.78
RFFL-210ENST00000582308 FGFR3P22607 806 aa10.2□□□□□ -0.78
RFFL-210ENST00000582308 RFX1P22670 979 aa10.2□□□□□ -0.78
RFFL-210ENST00000582308 PTPRDP23468 1912 aa10.2□□□□□ -0.78
RFFL-210ENST00000582308 TKTP29401 623 aaKnown RBP10.2□□□□□ -0.78
RFFL-210ENST00000582308 CTNNB1P35222 781 aa10.2□□□□□ -0.78
RFFL-210ENST00000582308 PPM1AP35813 382 aa10.2□□□□□ -0.78
RFFL-210ENST00000582308 MFAP3P55082 362 aa10.2□□□□□ -0.78
RFFL-210ENST00000582308 GOLGA8FQ08AF8 430 aa10.2□□□□□ -0.78
RFFL-210ENST00000582308 GOLGA8DPQ0D2H9 430 aa10.2□□□□□ -0.78
RFFL-210ENST00000582308 RAPGEF1Q13905 1077 aa10.2□□□□□ -0.78
RFFL-210ENST00000582308 FAM171A1Q5VUB5 890 aa10.2□□□□□ -0.78
RFFL-210ENST00000582308 DPH6Q7L8W6 267 aa10.2□□□□□ -0.78
RFFL-210ENST00000582308 PPFIBP1Q86W92 1011 aa10.2□□□□□ -0.78
RFFL-210ENST00000582308 OSTM1Q86WC4 334 aa10.2□□□□□ -0.78
RFFL-210ENST00000582308 DRC7Q8IY82 874 aa10.2□□□□□ -0.78
RFFL-210ENST00000582308 RNF168Q8IYW5 571 aaPredicted RBP10.2□□□□□ -0.78
RFFL-210ENST00000582308 ADGRF2Q8IZF7 708 aa10.2□□□□□ -0.78
RFFL-210ENST00000582308 KLHL23Q8NBE8 558 aa10.2□□□□□ -0.78
RFFL-210ENST00000582308 SPC24Q8NBT2 197 aa10.2□□□□□ -0.78
RFFL-210ENST00000582308 APPL2Q8NEU8 664 aa10.2□□□□□ -0.78
RFFL-210ENST00000582308 WHAMMQ8TF30 809 aa10.2□□□□□ -0.78
RFFL-210ENST00000582308 SHC3Q92529 594 aa10.2□□□□□ -0.78
RFFL-210ENST00000582308 JAKMIP2Q96AA8 810 aa10.2□□□□□ -0.78
RFFL-210ENST00000582308 B3GALT6Q96L58 329 aa10.2□□□□□ -0.78
RFFL-210ENST00000582308 FAM81BQ96LP2 452 aa10.2□□□□□ -0.78
RFFL-210ENST00000582308 NKX2-4Q9H2Z4 354 aa10.2□□□□□ -0.78
RFFL-210ENST00000582308 CISHQ9NSE2 258 aa10.2□□□□□ -0.78
RFFL-210ENST00000582308 MSRAQ9UJ68 235 aa10.2□□□□□ -0.78
RFFL-210ENST00000582308 CNTN6Q9UQ52 1028 aa10.2□□□□□ -0.78
RFFL-210ENST00000582308 DAAM1Q9Y4D1 1078 aa10.2□□□□□ -0.78
RFFL-210ENST00000582308 C5orf67F2Z3F1 127 aa10.19□□□□□ -0.78
RFFL-210ENST00000582308 F8VZ95 297 aa10.19□□□□□ -0.78
RFFL-210ENST00000582308 GABRDO14764 452 aa10.19□□□□□ -0.78
RFFL-210ENST00000582308 SYN3O14994 580 aa10.19□□□□□ -0.78
RFFL-210ENST00000582308 HCRTO43612 131 aa10.19□□□□□ -0.78
RFFL-210ENST00000582308 FGF18O76093 207 aa10.19□□□□□ -0.78
RFFL-210ENST00000582308 FAM163BP0C2L3 166 aa10.19□□□□□ -0.78
RFFL-210ENST00000582308 TYMPP19971 482 aa10.19□□□□□ -0.78
RFFL-210ENST00000582308 WARSP23381 471 aaKnown RBP10.19□□□□□ -0.78
RFFL-210ENST00000582308 LMO2P25791 158 aa10.19□□□□□ -0.78
RFFL-210ENST00000582308 CASP14P31944 242 aa10.19□□□□□ -0.78
RFFL-210ENST00000582308 GNL1P36915 607 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms