RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 OAZ2O95190 189 aa13.91□□□□□ -0.18
SS18-219ENST00000581570 VNN2O95498 520 aa13.91□□□□□ -0.18
SS18-219ENST00000581570 MCF2P10911 925 aa13.91□□□□□ -0.18
SS18-219ENST00000581570 YWHAHQ04917 246 aaPredicted RBP13.91□□□□□ -0.18
SS18-219ENST00000581570 FOXC1Q12948 553 aa13.91□□□□□ -0.18
SS18-219ENST00000581570 ACAP1Q15027 740 aa13.91□□□□□ -0.18
SS18-219ENST00000581570 PTPAQ15257 358 aa13.91□□□□□ -0.18
SS18-219ENST00000581570 ITPRIPL2Q3MIP1 535 aa13.91□□□□□ -0.18
SS18-219ENST00000581570 PLK5Q496M5 336 aa13.91□□□□□ -0.18
SS18-219ENST00000581570 ARHGAP15Q53QZ3 475 aa13.91□□□□□ -0.18
SS18-219ENST00000581570 TCEAL6Q6IPX3 200 aa13.91□□□□□ -0.18
SS18-219ENST00000581570 GAREM2Q75VX8 874 aa13.91□□□□□ -0.18
SS18-219ENST00000581570 CENPQQ7L2Z9 268 aaPredicted RBP13.91□□□□□ -0.18
SS18-219ENST00000581570 DNAJB7Q7Z6W7 309 aaPredicted RBP13.91□□□□□ -0.18
SS18-219ENST00000581570 TCEAL3Q969E4 200 aa13.91□□□□□ -0.18
SS18-219ENST00000581570 EDEM2Q9BV94 578 aa13.91□□□□□ -0.18
SS18-219ENST00000581570 TARS2Q9BW92 718 aaKnown RBP13.91□□□□□ -0.18
SS18-219ENST00000581570 OXCT2Q9BYC2 517 aaPredicted RBP13.91□□□□□ -0.18
SS18-219ENST00000581570 MRPL4Q9BYD3 311 aaKnown RBP13.91□□□□□ -0.18
SS18-219ENST00000581570 CRISPLD1Q9H336 500 aa13.91□□□□□ -0.18
SS18-219ENST00000581570 THG1LQ9NWX6 298 aaKnown RBP13.91□□□□□ -0.18
SS18-219ENST00000581570 ASB3Q9Y575 518 aa13.91□□□□□ -0.18
SS18-219ENST00000581570 TIMM13Q9Y5L4 95 aaPredicted RBP13.91□□□□□ -0.18
SS18-219ENST00000581570 C4orf47A7E2U8 309 aa13.9□□□□□ -0.18
SS18-219ENST00000581570 FGF19O95750 216 aa13.9□□□□□ -0.18
SS18-219ENST00000581570 HARSP12081 509 aaKnown RBP13.9□□□□□ -0.18
SS18-219ENST00000581570 FDPSP14324 419 aaKnown RBP13.9□□□□□ -0.18
SS18-219ENST00000581570 GABRR2P28476 465 aa13.9□□□□□ -0.18
SS18-219ENST00000581570 MCM7P33993 719 aa13.9□□□□□ -0.18
SS18-219ENST00000581570 ZNF252P-AS1Q0IIN9 211 aa13.9□□□□□ -0.18
SS18-219ENST00000581570 GRSF1Q12849 480 aaKnown RBP eCLIP13.9□□□□□ -0.18
SS18-219ENST00000581570 GPR17Q13304 367 aa13.9□□□□□ -0.18
SS18-219ENST00000581570 DIS3L2Q8IYB7 885 aaKnown RBP13.9□□□□□ -0.18
SS18-219ENST00000581570 CAMKK1Q8N5S9 505 aa13.9□□□□□ -0.18
SS18-219ENST00000581570 TMEM134Q9H6X4 195 aa13.9□□□□□ -0.18
SS18-219ENST00000581570 SLC27A5Q9Y2P5 690 aa13.9□□□□□ -0.18
SS18-219ENST00000581570 PHLPP2Q6ZVD8 1323 aa13.9□□□□□ -0.19
SS18-219ENST00000581570 CNOT1A5YKK6 2376 aaKnown RBP13.89□□□□□ -0.19
SS18-219ENST00000581570 OR6C75A6NL08 312 aa13.89□□□□□ -0.19
SS18-219ENST00000581570 M0QZQ0 153 aa13.89□□□□□ -0.19
SS18-219ENST00000581570 MEFVO15553 781 aaPredicted RBP13.89□□□□□ -0.19
SS18-219ENST00000581570 EPB41L2O43491 1005 aaKnown RBP13.89□□□□□ -0.19
SS18-219ENST00000581570 RHOBTB1O94844 696 aa13.89□□□□□ -0.19
SS18-219ENST00000581570 PRAMEF12O95522 483 aa13.89□□□□□ -0.19
SS18-219ENST00000581570 SPINK2P20155 84 aa13.89□□□□□ -0.19
SS18-219ENST00000581570 MUTP22033 750 aa13.89□□□□□ -0.19
SS18-219ENST00000581570 PROZP22891 400 aa13.89□□□□□ -0.19
SS18-219ENST00000581570 WEE1P30291 646 aa13.89□□□□□ -0.19
SS18-219ENST00000581570 NPTX2P47972 431 aa13.89□□□□□ -0.19
SS18-219ENST00000581570 PEX3P56589 373 aa13.89□□□□□ -0.19
SS18-219ENST00000581570 CREB5Q02930 508 aa13.89□□□□□ -0.19
SS18-219ENST00000581570 ELF2Q15723 593 aa13.89□□□□□ -0.19
SS18-219ENST00000581570 TMEM196Q5HYL7 178 aa13.89□□□□□ -0.19
SS18-219ENST00000581570 DAB2IPQ5VWQ8 1189 aa13.89□□□□□ -0.19
SS18-219ENST00000581570 CENPPQ6IPU0 288 aa13.89□□□□□ -0.19
SS18-219ENST00000581570 FSTL4Q6MZW2 842 aa13.89□□□□□ -0.19
SS18-219ENST00000581570 MPZL3Q6UWV2 235 aa13.89□□□□□ -0.19
SS18-219ENST00000581570 USP37Q86T82 979 aa13.89□□□□□ -0.19
SS18-219ENST00000581570 PSMG2Q969U7 264 aa13.89□□□□□ -0.19
SS18-219ENST00000581570 DUSP15Q9H1R2 295 aaPredicted RBP13.89□□□□□ -0.19
SS18-219ENST00000581570 BHMT2Q9H2M3 363 aa13.89□□□□□ -0.19
SS18-219ENST00000581570 TASP1Q9H6P5 420 aa13.89□□□□□ -0.19
SS18-219ENST00000581570 GKN1Q9NS71 199 aa13.89□□□□□ -0.19
SS18-219ENST00000581570 TUBGCP4Q9UGJ1 667 aa13.89□□□□□ -0.19
SS18-219ENST00000581570 GREB1Q4ZG55 1949 aa13.89□□□□□ -0.19
SS18-219ENST00000581570 TMEM8BA6NDV4 472 aa13.88□□□□□ -0.19
SS18-219ENST00000581570 ABLIM1O14639 778 aa13.88□□□□□ -0.19
SS18-219ENST00000581570 CAVIN2O95810 425 aa13.88□□□□□ -0.19
SS18-219ENST00000581570 MCM2P49736 904 aa13.88□□□□□ -0.19
SS18-219ENST00000581570 FOSBP53539 338 aa13.88□□□□□ -0.19
SS18-219ENST00000581570 ECM1Q16610 540 aa13.88□□□□□ -0.19
SS18-219ENST00000581570 SLC10A6Q3KNW5 377 aa13.88□□□□□ -0.19
SS18-219ENST00000581570 SEZ6Q53EL9 994 aa13.88□□□□□ -0.19
SS18-219ENST00000581570 SH3PXD2AQ5TCZ1 1133 aa13.88□□□□□ -0.19
SS18-219ENST00000581570 TAS1R3Q7RTX0 852 aa13.88□□□□□ -0.19
SS18-219ENST00000581570 ITIH5Q86UX2 942 aa13.88□□□□□ -0.19
SS18-219ENST00000581570 ATAD1Q8NBU5 361 aa13.88□□□□□ -0.19
SS18-219ENST00000581570 ZBTB45Q96K62 511 aaPredicted RBP13.88□□□□□ -0.19
SS18-219ENST00000581570 ADAM33Q9BZ11 813 aa13.88□□□□□ -0.19
SS18-219ENST00000581570 KMT5AQ9NQR1 393 aa13.88□□□□□ -0.19
SS18-219ENST00000581570 POLR3BQ9NW08 1133 aaPredicted RBP13.88□□□□□ -0.19
SS18-219ENST00000581570 WASF3Q9UPY6 502 aa13.88□□□□□ -0.19
SS18-219ENST00000581570 BAHCC1Q9P281 2608 aa13.88□□□□□ -0.19
SS18-219ENST00000581570 SDK1Q7Z5N4 2213 aa13.87□□□□□ -0.19
SS18-219ENST00000581570 BCLAF3A2AJT9 711 aaKnown RBP13.87□□□□□ -0.19
SS18-219ENST00000581570 MTMR11A4FU01 709 aa13.87□□□□□ -0.19
SS18-219ENST00000581570 TRDMT1O14717 391 aaKnown RBP13.87□□□□□ -0.19
SS18-219ENST00000581570 RNF40O75150 1001 aa13.87□□□□□ -0.19
SS18-219ENST00000581570 SOAT2O75908 522 aa13.87□□□□□ -0.19
SS18-219ENST00000581570 TOP3BO95985 862 aaKnown RBP13.87□□□□□ -0.19
SS18-219ENST00000581570 CCT6AP40227 531 aaKnown RBP13.87□□□□□ -0.19
SS18-219ENST00000581570 CYP4F8P98187 520 aa13.87□□□□□ -0.19
SS18-219ENST00000581570 DMP1Q13316 513 aaPredicted RBP13.87□□□□□ -0.19
SS18-219ENST00000581570 RUNX3Q13761 415 aa13.87□□□□□ -0.19
SS18-219ENST00000581570 TRIM29Q14134 588 aa13.87□□□□□ -0.19
SS18-219ENST00000581570 MYBPC2Q14324 1141 aa13.87□□□□□ -0.19
SS18-219ENST00000581570 HAUS3Q68CZ6 603 aa13.87□□□□□ -0.19
SS18-219ENST00000581570 DSTYKQ6XUX3 929 aa13.87□□□□□ -0.19
SS18-219ENST00000581570 TMEM130Q8N3G9 435 aa13.87□□□□□ -0.19
SS18-219ENST00000581570 TTC9BQ8N6N2 239 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms